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linux.yml
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name: PeleLMeX_linux
on:
workflow_dispatch:
push:
branches: [ main, development ]
pull_request:
branches: [ main, development ]
concurrency:
group: ${{ github.ref }}-${{ github.head_ref }}-PeleLMeX_linux
cancel-in-progress: true
jobs:
# Build and Run the EB_FlowPastCylinder RegTest with GNU9.3 and MPI support
#FPC2D:
# name: [email protected] MPI Run [FPC2DDBG]
# runs-on: ubuntu-latest
# env:
# {CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code"}
# steps:
# - uses: actions/checkout@v3
# - name: System Dependencies
# run: .github/workflows/dependencies/dependencies_gcc10.sh
# - name: Repo Dependencies
# run: Utils/CloneDeps.sh
# - name: Build
# env:
# AMREX_HOME: ${GITHUB_WORKSPACE}/build/amrex
# PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
# PELELMEX_HOME: ${GITHUB_WORKSPACE}
# AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
# SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
# working-directory: ./Exec/RegTests/EB_FlowPastCylinder/
# run: |
# make TPL COMP=gnu USE_MPI=TRUE DEBUG=TRUE
# make -j 2 COMP=gnu USE_MPI=TRUE DEBUG=TRUE
# - name: Run
# working-directory: ./Exec/RegTests/EB_FlowPastCylinder/
# run: |
# ./PeleLMeX2d.gnu.DEBUG.MPI.ex input.2d-regt amr.max_step=2 amr.plot_int=-1 amr.check_int=-1 amrex.fpe_trap_invalid=1 amrex.fpe_trap_zero=1 amrex.fpe_trap_overflow=1
# ./PeleLMeX2d.gnu.DEBUG.MPI.ex input.2d-regt_WallBump amr.max_step=2 amr.plot_int=-1 amr.check_int=-1
# make -j 2 COMP=gnu USE_MPI=TRUE
# - name: RunDNS
# working-directory: ./Exec/RegTests/HITDecay/
# run: |
# ./PeleLMeX3d.gnu.MPI.ex input.3d amr.max_step=10 amr.plot_int=-1 amr.check_int=-1
# - name: RunLES_Smago
# working-directory: ./Exec/RegTests/HITDecay/
# run: |
# ./PeleLMeX3d.gnu.MPI.ex input.3d_les amr.max_step=10 amr.plot_int=-1 amr.check_int=-1
# - name: RunLES_WALE
# working-directory: ./Exec/RegTests/HITDecay/
# run: |
# ./PeleLMeX3d.gnu.MPI.ex input.3d_les peleLM.les_model="WALE" amr.max_step=10 amr.plot_int=-1 amr.check_int=-1
# Build and Run the EB_PipeFlow RegTest with GNU9.3 and MPI support
EBPF3D:
name: [email protected] MPI Run [EBPF3D]
runs-on: ubuntu-latest
env:
{CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code"}
steps:
- uses: actions/checkout@v3
- name: System Dependencies
run: .github/workflows/dependencies/dependencies_gcc10.sh
- name: Repo Dependencies
run: Utils/CloneDeps.sh
- name: Build
env:
AMREX_HOME: ${GITHUB_WORKSPACE}/build/amrex
PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
PELELMEX_HOME: ${GITHUB_WORKSPACE}
AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
working-directory: ./Exec/RegTests/EB_PipeFlow/
run: |
make TPL COMP=gnu USE_MPI=TRUE
make -j 2 COMP=gnu USE_MPI=TRUE
- name: Run
working-directory: ./Exec/RegTests/EB_PipeFlow/
run: |
mpirun -n 2 ./PeleLMeX3d.gnu.MPI.ex input.3d-regt amr.max_step=2 amr.plot_int=-1 amr.check_int=-1 amr.n_cell=128 32 32
# Build and Run the SootRadTest RegTest with GNU9.3 and MPI support
SOOTRAD:
name: [email protected] MPI Run [SootRadTest]
runs-on: ubuntu-latest
env:
{CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code"}
steps:
- uses: actions/checkout@v3
- name: System Dependencies
run: .github/workflows/dependencies/dependencies_gcc10.sh
- name: Repo Dependencies
run: |
Utils/CloneDeps.sh
git clone --branch main https://github.com/AMReX-Combustion/PeleRad.git build/PeleRad
- name: Build Release
env:
AMREX_HOME: ${GITHUB_WORKSPACE}/build/amrex
PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
PELERAD_HOME: ${GITHUB_WORKSPACE}/build/PeleRad
PELEMP_HOME: ${GITHUB_WORKSPACE}/build/PeleMP
PELELMEX_HOME: ${GITHUB_WORKSPACE}
AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
working-directory: ./Exec/RegTests/SootRadTest/
run: |
make TPL COMP=gnu USE_MPI=TRUE TINY_PROFILE=FALSE
make -j 2 COMP=gnu USE_MPI=TRUE TINY_PROFILE=FALSE
- name: Run Release
env:
PELERAD_HOME: ${GITHUB_WORKSPACE}/build/PeleRad
working-directory: ./Exec/RegTests/SootRadTest/
run: |
eval DATA_PATH=$PELERAD_HOME
mpirun -n 2 ./PeleLMeX2d.gnu.MPI.ex first-input.inp amr.max_step=2 amr.plot_int=2 amr.check_int=2 pelerad.kppath="$DATA_PATH/data/kpDB/"
- name: Build Debug
env:
AMREX_HOME: ${GITHUB_WORKSPACE}/build/amrex
PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
PELERAD_HOME: ${GITHUB_WORKSPACE}/build/PeleRad
PELEMP_HOME: ${GITHUB_WORKSPACE}/build/PeleMP
PELELMEX_HOME: ${GITHUB_WORKSPACE}
AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
working-directory: ./Exec/RegTests/SootRadTest/
run: |
make TPL COMP=gnu USE_MPI=TRUE DEBUG=TRUE TINY_PROFILE=FALSE
make -j 2 COMP=gnu USE_MPI=TRUE DEBUG=TRUE TINY_PROFILE=FALSE
- name: Run Debug
env:
PELERAD_HOME: ${GITHUB_WORKSPACE}/build/PeleRad
working-directory: ./Exec/RegTests/SootRadTest/
run: |
eval DATA_PATH=$PELERAD_HOME
mpirun -n 2 ./PeleLMeX2d.gnu.DEBUG.MPI.ex first-input.inp amr.max_step=2 amr.plot_int=2 amr.check_int=2 pelerad.kppath="$DATA_PATH/data/kpDB/"
# Build and Run the EB_BackwardStepFlame RegTest with GNU9.3 and MPI support
EBBFS:
name: [email protected] MPI Run [EBBFS]
runs-on: ubuntu-latest
env:
{CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code"}
steps:
- uses: actions/checkout@v3
- name: System Dependencies
run: .github/workflows/dependencies/dependencies_gcc10.sh
- name: Repo Dependencies
run: Utils/CloneDeps.sh
- name: Build
env:
AMREX_HOME: ${GITHUB_WORKSPACE}/build/amrex
PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
PELELMEX_HOME: ${GITHUB_WORKSPACE}
AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
working-directory: ./Exec/RegTests/EB_BackwardStepFlame/
run: |
make TPL COMP=gnu USE_MPI=TRUE
make -j 2 COMP=gnu USE_MPI=TRUE
- name: Run
working-directory: ./Exec/RegTests/EB_BackwardStepFlame/
run: |
mpirun -n 2 ./PeleLMeX2d.gnu.MPI.ex input.2d amr.max_step=2 amr.plot_int=-1 amr.check_int=-1
# Build and Run the Efield flamesheet with GNU9.3 and MPI support
EFIELD:
name: [email protected] MPI Run [EFIELD]
runs-on: ubuntu-latest
env:
{CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code"}
steps:
- uses: actions/checkout@v3
- name: System Dependencies
run: .github/workflows/dependencies/dependencies_gcc10.sh
- name: Repo Dependencies
run: Utils/CloneDeps.sh
- name: Build
env:
AMREX_HOME: ${GITHUB_WORKSPACE}/build/amrex
PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
PELELMEX_HOME: ${GITHUB_WORKSPACE}
AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
working-directory: ./Exec/Efield/FlameSheetIons
run: |
make TPL COMP=gnu USE_MPI=TRUE
make -j 2 COMP=gnu USE_MPI=TRUE
- name: Run
working-directory: ./Exec/Efield/FlameSheetIons
run: |
mpirun -n 2 ./PeleLMeX2d.gnu.MPI.EF.ex input.2d-regt amr.max_step=2 amr.plot_int=-1 amr.check_int=-1
# Build and Run the TurbInflow RegTest in DEBUG with GNU9.3 and MPI support
TI3D:
name: [email protected] MPI Run [TI3DDBG]
runs-on: ubuntu-latest
env:
{CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code"}
steps:
- uses: actions/checkout@v3
- name: System Dependencies
run: .github/workflows/dependencies/dependencies_gcc10.sh
- name: Repo Dependencies
run: Utils/CloneDeps.sh
- name: GenerateTurbFile
env:
AMREX_HOME: ${GITHUB_WORKSPACE}/build/amrex
PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
PELELMEX_HOME: ${GITHUB_WORKSPACE}
AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
working-directory: ./Exec/RegTests/TurbInflow/TurbFileHIT
run: |
make -j 2 COMP=gnu
./PeleTurb3d.gnu.ex input hit_file=../../HITDecay/hit_ic_4_32.dat input_ncell=32
- name: Build
env:
AMREX_HOME: ${GITHUB_WORKSPACE}/build/amrex
PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
PELELMEX_HOME: ${GITHUB_WORKSPACE}
AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
working-directory: ./Exec/RegTests/TurbInflow/
run: |
make TPL COMP=gnu USE_MPI=TRUE DEBUG=TRUE
make -j 2 COMP=gnu USE_MPI=TRUE DEBUG=TRUE
- name: Run
working-directory: ./Exec/RegTests/TurbInflow/
run: |
mpirun -n 2 ./PeleLMeX3d.gnu.DEBUG.MPI.ex input.3d peleLM.num_init_iter=1 amr.n_cell=32 32 32 amr.max_step=2 amr.plot_int=-1 amr.check_int=-1
mpirun -n 2 ./PeleLMeX3d.gnu.DEBUG.MPI.ex input.3d_twoInjs peleLM.num_init_iter=1 amr.n_cell=32 32 32 amr.max_step=2 amr.plot_int=-1 amr.check_int=-1
mpirun -n 2 ./PeleLMeX3d.gnu.DEBUG.MPI.ex input.3d_posX peleLM.num_init_iter=1 amr.n_cell=32 32 32 amr.max_step=2 amr.plot_int=-1 amr.check_int=-1
mpirun -n 2 ./PeleLMeX3d.gnu.DEBUG.MPI.ex input.3d_BoxLoZ peleLM.num_init_iter=1 amr.n_cell=32 32 32 amr.max_step=2 amr.plot_int=-1 amr.check_int=-1
# Build and Run the SprayTest RegTest with GNU9.3 and MPI support
SPRAY:
name: [email protected] MPI Run [SPRAY]
runs-on: ubuntu-latest
env:
{CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code"}
steps:
- uses: actions/checkout@v3
- name: System Dependencies
run: |
.github/workflows/dependencies/dependencies_gcc10.sh
sudo apt-get install -y python3-setuptools
python3 -m pip install --user numpy
python3 -m pip install --user argparse
- name: Repo Dependencies
run: Utils/CloneDeps.sh
- name: Build AMReX Tools
env:
AMREX_HOME: ${GITHUB_WORKSPACE}/build/amrex
working-directory: ./build/amrex/Tools/Plotfile
run: |
make
- name: Build PeleLMeX
env:
AMREX_HOME: ${GITHUB_WORKSPACE}/build/amrex
PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
PELELMEX_HOME: ${GITHUB_WORKSPACE}
AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
PELEMP_HOME: ${GITHUB_WORKSPACE}/build/PeleMP
working-directory: ./Exec/RegTests/SprayTest/
run: |
make TPL COMP=gnu USE_MPI=TRUE
make -j 2 COMP=gnu USE_MPI=TRUE
- name: Run
working-directory: ./Exec/RegTests/SprayTest/
run: |
cp ${GITHUB_WORKSPACE}/build/amrex/Tools/Plotfile/fcompare.gnu.ex .
sed -i "s/mpiexec -n 1/mpiexec -n 2/g" multiRuns.py
./multiRuns.py
./compareOutput.py