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main.yml
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on:
push:
branches:
- main
- develop
pull_request:
branches:
- main
- develop
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: windows-latest, r: 'release'}
- {os: macOS-latest, r: '3.6', args: '--install-args=\"--configure-args=--with-proj-lib=/usr/local/lib/\"", "--ignore-vignettes', build_args: "--no-build-vignettes"}
- {os: macOS-latest, r: 'release', args: '--install-args=\"--configure-args=--with-proj-lib=/usr/local/lib/\"", "--ignore-vignettes', build_args: "--no-build-vignettes"}
- {os: macOS-latest, r: 'devel', args: '--install-args=\"--configure-args=--with-proj-lib=/usr/local/lib/\"", "--ignore-vignettes', build_args: "--no-build-vignettes"}
- {os: ubuntu-18.04, r: 'release', rspm: "https://packagemanager.rstudio.com/all/__linux__/bionic/latest"}
env:
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
RSPM: ${{ matrix.config.rspm }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
- uses: r-lib/actions/setup-pandoc@v2
- name: Brew and macOS config
if: runner.os == 'macOS'
run: |
brew install pkg-config
brew install udunits
brew install gdal
cat <<EOT >> .Renviron
PKG_CONFIG_PATH=/usr/local/lib/pkgconfig/
PROJ_LIB=/usr/local/opt/proj/share/proj/
# for installing XML package from source
XML_CONFIG=/usr/local/opt/libxml2/bin/xml2-config
EOT
cat <<EOT >> .Rprofile
config_args <- c("sf" = "--with-proj-lib=/usr/local/lib/", "rgdal" = "--with-proj-lib=/usr/local/lib/ --with-proj-include=/usr/local/include/")
r <- getOption("repos")
r["CRAN"] <- "https://cran.rstudio.com"
options(configure.args = config_args, repos = r)
EOT
- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}
- name: Cache R packages
if: runner.os != 'Windows'
uses: actions/cache@v1
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
- name: Install Linux system dependencies
if: runner.os == 'Linux'
env:
RHUB_PLATFORM: linux-x86_64-ubuntu-gcc
run: |
Rscript -e "remotes::install_github('r-hub/sysreqs')"
sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))")
sudo -s eval "$sysreqs"
- name: Install dependencies
run: |
remotes::install_deps(dependencies = TRUE)
remotes::install_cran("rcmdcheck")
shell: Rscript {0}
- name: Check
env:
_R_CHECK_CRAN_INCOMING_REMOTE_: false
run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check")
shell: Rscript {0}
- name: Upload check results
if: failure()
uses: actions/upload-artifact@main
with:
name: ${{ runner.os }}-r${{ matrix.config.r }}-results
path: check