From d16b2092c03494fb6a2ce64bb89b2a8a2431d4b7 Mon Sep 17 00:00:00 2001
From: jpizarro <jose.pizarro-blanco@bam.de>
Date: Wed, 18 Dec 2024 13:49:26 +0100
Subject: [PATCH] Changing name to package folder

---
 .coveragerc                                   |  2 +-
 .github/workflows/actions.yml                 |  8 ++--
 .github/workflows/coveralls.yml               |  2 +-
 .gitignore                                    |  8 ++--
 .gitmodules                                   |  4 +-
 .vscode/settings.json                         |  8 ++--
 README.md                                     | 39 ++++++++++++-------
 bam_data_store/dependencies/openbisschema     |  1 -
 .../__init__.py                               |  0
 .../cli/__init__.py                           |  0
 {bam_data_store => bam_masterdata}/cli/cli.py | 16 ++++----
 .../cli/entities_to_excel.py                  |  2 +-
 .../cli/entities_to_json.py                   |  2 +-
 .../datamodel/__init__.py                     |  0
 .../datamodel/collection_types.py             |  4 +-
 .../datamodel/dataset_types.py                |  0
 .../datamodel/object_types.py                 |  4 +-
 .../datamodel/property_types.py               |  2 +-
 .../datamodel/vocabulary_types.py             |  4 +-
 {bam_data_store => bam_masterdata}/logger.py  |  0
 .../metadata/__init__.py                      |  0
 .../metadata/definitions.py                   |  0
 .../metadata/entities.py                      |  2 +-
 .../utils/__init__.py                         |  0
 .../utils/utils.py                            |  1 -
 mkdocs.yml                                    |  6 +--
 pyproject.toml                                | 12 +++---
 scripts/install_python_dependencies.sh        |  2 +-
 tests/conftest.py                             |  6 +--
 tests/metadata/test_definitions.py            |  2 +-
 tests/test_logger.py                          |  2 +-
 tests/utils/test_utils.py                     |  4 +-
 32 files changed, 75 insertions(+), 68 deletions(-)
 delete mode 160000 bam_data_store/dependencies/openbisschema
 rename {bam_data_store => bam_masterdata}/__init__.py (100%)
 rename {bam_data_store => bam_masterdata}/cli/__init__.py (100%)
 rename {bam_data_store => bam_masterdata}/cli/cli.py (82%)
 rename {bam_data_store => bam_masterdata}/cli/entities_to_excel.py (98%)
 rename {bam_data_store => bam_masterdata}/cli/entities_to_json.py (97%)
 rename {bam_data_store => bam_masterdata}/datamodel/__init__.py (100%)
 rename {bam_data_store => bam_masterdata}/datamodel/collection_types.py (91%)
 rename {bam_data_store => bam_masterdata}/datamodel/dataset_types.py (100%)
 rename {bam_data_store => bam_masterdata}/datamodel/object_types.py (94%)
 rename {bam_data_store => bam_masterdata}/datamodel/property_types.py (70%)
 rename {bam_data_store => bam_masterdata}/datamodel/vocabulary_types.py (95%)
 rename {bam_data_store => bam_masterdata}/logger.py (100%)
 rename {bam_data_store => bam_masterdata}/metadata/__init__.py (100%)
 rename {bam_data_store => bam_masterdata}/metadata/definitions.py (100%)
 rename {bam_data_store => bam_masterdata}/metadata/entities.py (98%)
 rename {bam_data_store => bam_masterdata}/utils/__init__.py (100%)
 rename {bam_data_store => bam_masterdata}/utils/utils.py (99%)

diff --git a/.coveragerc b/.coveragerc
index 38ed70c..8b25d7a 100644
--- a/.coveragerc
+++ b/.coveragerc
@@ -1,4 +1,4 @@
 [run]
 omit =
-    bam_data_store/_version.py
+    bam_masterdata/_version.py
     */__init__.py
\ No newline at end of file
diff --git a/.github/workflows/actions.yml b/.github/workflows/actions.yml
index 82df73e..99eb97b 100644
--- a/.github/workflows/actions.yml
+++ b/.github/workflows/actions.yml
@@ -34,10 +34,10 @@ jobs:
         uv pip install -e '.[dev]'
     - name: mypy
       run: |
-        python -m mypy --ignore-missing-imports --follow-imports=silent --no-strict-optional --exclude dependencies bam_data_store tests
+        python -m mypy --ignore-missing-imports --follow-imports=silent --no-strict-optional --exclude dependencies bam_masterdata tests
     - name: Test with pytest
       run: |
-        python -m pytest -sv --ignore=bam_data_store/dependencies tests
+        python -m pytest -sv --ignore=bam_masterdata/dependencies tests
   build-and-install:
     runs-on: ubuntu-latest
     steps:
@@ -62,11 +62,11 @@ jobs:
         - uses: actions/checkout@v4
         - uses: chartboost/ruff-action@v1
           with:
-            args: "check . --exclude bam_data_store/dependencies"
+            args: "check . --exclude bam_masterdata/dependencies"
   ruff-formatting:
       runs-on: ubuntu-latest
       steps:
         - uses: actions/checkout@v4
         - uses: chartboost/ruff-action@v1
           with:
-            args: "format . --check --verbose --exclude bam_data_store/dependencies"
\ No newline at end of file
+            args: "format . --check --verbose --exclude bam_masterdata/dependencies"
\ No newline at end of file
diff --git a/.github/workflows/coveralls.yml b/.github/workflows/coveralls.yml
index eb51531..fd52b28 100644
--- a/.github/workflows/coveralls.yml
+++ b/.github/workflows/coveralls.yml
@@ -30,7 +30,7 @@ jobs:
         uv pip install coveralls
     - name: Build coverage file
       run: |
-        pytest --cov-config=.coveragerc --junitxml=pytest.xml --cov=bam_data_store tests | tee pytest-coverage.txt
+        pytest --cov-config=.coveragerc --junitxml=pytest.xml --cov=bam_masterdata tests | tee pytest-coverage.txt
     - name: Pytest coverage comment
       uses: MishaKav/pytest-coverage-comment@main
       with:
diff --git a/.gitignore b/.gitignore
index 6cabf4c..1dda6bb 100644
--- a/.gitignore
+++ b/.gitignore
@@ -169,9 +169,9 @@ cython_debug/
 # Ruff
 .ruff_cache
 
-# static artifacts
-artifacts
-
 # pytest coverage
 pytest.xml
-pytest-coverage.txt
\ No newline at end of file
+pytest-coverage.txt
+
+# artifacts
+artifacts
\ No newline at end of file
diff --git a/.gitmodules b/.gitmodules
index d59ac33..25664af 100644
--- a/.gitmodules
+++ b/.gitmodules
@@ -1,3 +1,3 @@
-[submodule "bam_data_store/dependencies/openbisschema"]
-	path = bam_data_store/dependencies/openbisschema
+[submodule "bam_masterdata/dependencies/openbisschema"]
+	path = bam_masterdata/dependencies/openbisschema
 	url = https://git.bam.de/bam-data-store/development/openbisschema.git
diff --git a/.vscode/settings.json b/.vscode/settings.json
index 806496d..43caab4 100644
--- a/.vscode/settings.json
+++ b/.vscode/settings.json
@@ -33,7 +33,7 @@
           "type": "debugpy",
           "request": "launch",
           "console": "integratedTerminal",
-          "program": "${workspaceFolder}/src/bam_data_store/app.py",  // path to your entry point Python module
+          "program": "${workspaceFolder}/src/bam_masterdata/app.py",  // path to your entry point Python module
       },
       {
           "name": "bds tests",
@@ -51,11 +51,11 @@
           ]
       },
       {
-        "name": "bds export-entities-to-json",
+        "name": "bds export-to-json",
         "type": "debugpy",
         "request": "launch",
         "cwd": "${workspaceFolder}",
-        "program": "${workspaceFolder}/.venv/bin/bam_data_store",
+        "program": "${workspaceFolder}/.venv/bin/bam_masterdata",
         "justMyCode": false,
         "args": ["export-entities-to-json"]
       },
@@ -64,7 +64,7 @@
         "type": "debugpy",
         "request": "launch",
         "cwd": "${workspaceFolder}",
-        "program": "${workspaceFolder}/.venv/bin/bam_data_store",
+        "program": "${workspaceFolder}/.venv/bin/bam_masterdata",
         "justMyCode": false,
         "args": ["export-entities-to-excel"]
       },
diff --git a/README.md b/README.md
index e068e91..68d8e5f 100644
--- a/README.md
+++ b/README.md
@@ -1,7 +1,6 @@
-# BAMDataStore
-
-This is the main repository of the BAM Data Store project. This is both a Python package and a web connecting the different resources for the Data Store.
+# BAM Masterdata
 
+The BAM Masterdata is a repository containing all the masterdata schema defining in BAM, as well as some utility functions to handle the masterdata.
 
 <!--
 ## Getting started
@@ -11,26 +10,29 @@ This is the main repository of the BAM Data Store project. This is both a Python
 ## Development
 
 If you want to develop locally this package, clone the project and enter in the workspace folder:
+
 ```sh
-git clone https://git.bam.de/bam-data-store/bam-data-store.git
-cd bam-data-store
+git clone https://git.bam.de/bam-data-store/bam-masterdata.git
+cd bam-masterdata
 ```
 
 Create a virtual environment (you can use Python>3.9) in your workspace:
+
 ```sh
 python3 -m venv .venv
 source .venv/bin/activate
 ```
 
 Run the following script:
+
 ```sh
 ./scripts/install_python_dependencies
 ```
 
-
 ### Run the tests
 
 You can locally run the tests by doing:
+
 ```sh
 python -m pytest -sv tests
 ```
@@ -38,6 +40,7 @@ python -m pytest -sv tests
 where the `-s` and `-v` options toggle the output verbosity.
 
 You can also generate a local coverage report:
+
 ```sh
 python -m pytest --cov=src tests
 ```
@@ -45,11 +48,13 @@ python -m pytest --cov=src tests
 ### Run auto-formatting and linting
 
 We use [Ruff](https://docs.astral.sh/ruff/) for formatting and linting the code following the rules specified in the `pyproject.toml`. You can run locally:
+
 ```sh
 ruff check .
 ```
 
 This will produce an output with the specific issues found. In order to auto-fix them, run:
+
 ```sh
 ruff format . --check
 ```
@@ -93,21 +98,25 @@ The settings configuration file `.vscode/settings.json` automatically applies th
 ### Documentation on Github pages
 
 To view the documentation locally, make sure to have installed the extra packages (this is part of the `scripts/install_python_dependencies.sh`, so if you ran this script before, you don't need to do it again now):
+
 ```sh
 uv pip install -e '[docu]'
 ```
 
 The first time, build the server:
+
 ```sh
 mkdocs build
 ```
 
 Run the documentation server:
+
 ```sh
 mkdocs serve
 ```
 
 The output looks like:
+
 ```sh
 INFO    -  Building documentation...
 INFO    -  Cleaning site directory
@@ -119,12 +128,12 @@ Simply click on `http://127.0.0.1:8000/`. The changes in the `md` files of the d
 
 ## Main contributors
 
-| Name | E-mail     | Role |
-|------|------------|--------|
-| Dr. Angela Ariza | [angela.ariza@bam.de](mailto:angela.ariza@bam.de) | Outreach and Training |
-| Caroline Demidova | [caroline.demidova@bam.de](mailto:caroline.demidova@bam.de) | Outreach and Training |
-| Daniel Kosztyla | [daniel.kosztyla@bam.de](mailto:daniel.kosztyla@bam.de) | IT |
-| Carlos Madariaga | [carlos.madariaga@bam.de](mailto:carlos.madariaga@bam.de) | Software Developer |
-| Kristina Meindl | [kristina.meindl@bam.de](mailto:kristina.meindl@bam.de) | Project Manager |
-| Dr. Jose M. Pizarro | [jose.pizarro-blanco@bam.de](mailto:jose.pizarro-blanco@bam.de) | Data Management |
-| Jörg Rädler | [joerg.raedler@bam.de](mailto:joerg.raedler@bam.de) | IT |
+| Name                | E-mail                                                       | Role                  |
+| ------------------- | ------------------------------------------------------------ | --------------------- |
+| Dr. Angela Ariza    | [angela.ariza@bam.de](mailto:angela.ariza@bam.de)               | Outreach and Training |
+| Caroline Demidova   | [caroline.demidova@bam.de](mailto:caroline.demidova@bam.de)     | Outreach and Training |
+| Daniel Kosztyla     | [daniel.kosztyla@bam.de](mailto:daniel.kosztyla@bam.de)         | IT                    |
+| Carlos Madariaga    | [carlos.madariaga@bam.de](mailto:carlos.madariaga@bam.de)       | Software Developer    |
+| Kristina Meindl     | [kristina.meindl@bam.de](mailto:kristina.meindl@bam.de)         | Project Manager       |
+| Dr. Jose M. Pizarro | [jose.pizarro-blanco@bam.de](mailto:jose.pizarro-blanco@bam.de) | Data Management       |
+| Jörg Rädler       | [joerg.raedler@bam.de](mailto:joerg.raedler@bam.de)             | IT                    |
diff --git a/bam_data_store/dependencies/openbisschema b/bam_data_store/dependencies/openbisschema
deleted file mode 160000
index f27dda9..0000000
--- a/bam_data_store/dependencies/openbisschema
+++ /dev/null
@@ -1 +0,0 @@
-Subproject commit f27dda949646cd61e163f522dc867db766344b5f
diff --git a/bam_data_store/__init__.py b/bam_masterdata/__init__.py
similarity index 100%
rename from bam_data_store/__init__.py
rename to bam_masterdata/__init__.py
diff --git a/bam_data_store/cli/__init__.py b/bam_masterdata/cli/__init__.py
similarity index 100%
rename from bam_data_store/cli/__init__.py
rename to bam_masterdata/cli/__init__.py
diff --git a/bam_data_store/cli/cli.py b/bam_masterdata/cli/cli.py
similarity index 82%
rename from bam_data_store/cli/cli.py
rename to bam_masterdata/cli/cli.py
index 3093498..fbcc0f2 100644
--- a/bam_data_store/cli/cli.py
+++ b/bam_masterdata/cli/cli.py
@@ -3,17 +3,17 @@
 import click
 from openpyxl import Workbook
 
-from bam_data_store.cli.entities_to_excel import entities_to_excel
-from bam_data_store.cli.entities_to_json import entities_to_json
-from bam_data_store.logger import logger
-from bam_data_store.utils import (
+from bam_masterdata.cli.entities_to_excel import entities_to_excel
+from bam_masterdata.cli.entities_to_json import entities_to_json
+from bam_masterdata.logger import logger
+from bam_masterdata.utils import (
     delete_and_create_dir,
     import_module,
     listdir_py_modules,
 )
 
 
-@click.group(help='Entry point to run `bam_data_store` CLI commands.')
+@click.group(help='Entry point to run `bam_masterdata` CLI commands.')
 def cli():
     pass
 
@@ -21,7 +21,7 @@ def cli():
 @cli.command(help='Export entities to JSON files to the `./artifacts/` folder.')
 def export_entities_to_json():
     # Get the directories from the Python modules and the export directory for the static artifacts
-    datamodel_dir = os.path.join('.', 'bam_data_store', 'datamodel')
+    datamodel_dir = os.path.join('.', 'bam_masterdata', 'datamodel')
     export_dir = os.path.join('.', 'artifacts')
 
     # Delete and create the export directory
@@ -44,12 +44,12 @@ def export_entities_to_json():
 )
 def export_entities_to_excel():
     # Get the Python modules to process the datamodel
-    datamodel_dir = os.path.join('.', 'bam_data_store', 'datamodel')
+    datamodel_dir = os.path.join('.', 'bam_masterdata', 'datamodel')
     py_modules = listdir_py_modules(directory_path=datamodel_dir, logger=logger)
 
     # Load the definitions module classes
     definitions_module = import_module(
-        module_path='./bam_data_store/metadata/definitions.py'
+        module_path='./bam_masterdata/metadata/definitions.py'
     )
 
     # Process the modules and save the entities to the openBIS masterdata Excel file
diff --git a/bam_data_store/cli/entities_to_excel.py b/bam_masterdata/cli/entities_to_excel.py
similarity index 98%
rename from bam_data_store/cli/entities_to_excel.py
rename to bam_masterdata/cli/entities_to_excel.py
index 93bfdf7..4ff2918 100644
--- a/bam_data_store/cli/entities_to_excel.py
+++ b/bam_masterdata/cli/entities_to_excel.py
@@ -5,7 +5,7 @@
 if TYPE_CHECKING:
     from openpyxl.worksheet.worksheet import Worksheet
 
-from bam_data_store.utils import import_module
+from bam_masterdata.utils import import_module
 
 
 def entities_to_excel(
diff --git a/bam_data_store/cli/entities_to_json.py b/bam_masterdata/cli/entities_to_json.py
similarity index 97%
rename from bam_data_store/cli/entities_to_json.py
rename to bam_masterdata/cli/entities_to_json.py
index 7cbefcd..55b6402 100644
--- a/bam_data_store/cli/entities_to_json.py
+++ b/bam_masterdata/cli/entities_to_json.py
@@ -8,7 +8,7 @@
 
 import click
 
-from bam_data_store.utils import delete_and_create_dir, import_module
+from bam_masterdata.utils import delete_and_create_dir, import_module
 
 
 def entities_to_json(
diff --git a/bam_data_store/datamodel/__init__.py b/bam_masterdata/datamodel/__init__.py
similarity index 100%
rename from bam_data_store/datamodel/__init__.py
rename to bam_masterdata/datamodel/__init__.py
diff --git a/bam_data_store/datamodel/collection_types.py b/bam_masterdata/datamodel/collection_types.py
similarity index 91%
rename from bam_data_store/datamodel/collection_types.py
rename to bam_masterdata/datamodel/collection_types.py
index 43d05e3..6f0b110 100644
--- a/bam_data_store/datamodel/collection_types.py
+++ b/bam_masterdata/datamodel/collection_types.py
@@ -1,8 +1,8 @@
-from bam_data_store.metadata.definitions import (
+from bam_masterdata.metadata.definitions import (
     CollectionTypeDef,
     PropertyTypeAssignment,
 )
-from bam_data_store.metadata.entities import CollectionType
+from bam_masterdata.metadata.entities import CollectionType
 
 
 class DefaultExperiment(CollectionType):
diff --git a/bam_data_store/datamodel/dataset_types.py b/bam_masterdata/datamodel/dataset_types.py
similarity index 100%
rename from bam_data_store/datamodel/dataset_types.py
rename to bam_masterdata/datamodel/dataset_types.py
diff --git a/bam_data_store/datamodel/object_types.py b/bam_masterdata/datamodel/object_types.py
similarity index 94%
rename from bam_data_store/datamodel/object_types.py
rename to bam_masterdata/datamodel/object_types.py
index d657bee..e75a1ec 100644
--- a/bam_data_store/datamodel/object_types.py
+++ b/bam_masterdata/datamodel/object_types.py
@@ -1,5 +1,5 @@
-from bam_data_store.metadata.definitions import ObjectTypeDef, PropertyTypeAssignment
-from bam_data_store.metadata.entities import ObjectType
+from bam_masterdata.metadata.definitions import ObjectTypeDef, PropertyTypeAssignment
+from bam_masterdata.metadata.entities import ObjectType
 
 
 class Instrument(ObjectType):
diff --git a/bam_data_store/datamodel/property_types.py b/bam_masterdata/datamodel/property_types.py
similarity index 70%
rename from bam_data_store/datamodel/property_types.py
rename to bam_masterdata/datamodel/property_types.py
index d409f44..a1949f7 100644
--- a/bam_data_store/datamodel/property_types.py
+++ b/bam_masterdata/datamodel/property_types.py
@@ -1,4 +1,4 @@
-from bam_data_store.metadata.definitions import PropertyTypeDef
+from bam_masterdata.metadata.definitions import PropertyTypeDef
 
 Name = PropertyTypeDef(
     version=1,
diff --git a/bam_data_store/datamodel/vocabulary_types.py b/bam_masterdata/datamodel/vocabulary_types.py
similarity index 95%
rename from bam_data_store/datamodel/vocabulary_types.py
rename to bam_masterdata/datamodel/vocabulary_types.py
index 3468d1c..e2039e4 100644
--- a/bam_data_store/datamodel/vocabulary_types.py
+++ b/bam_masterdata/datamodel/vocabulary_types.py
@@ -1,8 +1,8 @@
-from bam_data_store.metadata.definitions import (
+from bam_masterdata.metadata.definitions import (
     VocabularyTerm,
     VocabularyTypeDef,
 )
-from bam_data_store.metadata.entities import VocabularyType
+from bam_masterdata.metadata.entities import VocabularyType
 
 
 class DocumentType(VocabularyType):
diff --git a/bam_data_store/logger.py b/bam_masterdata/logger.py
similarity index 100%
rename from bam_data_store/logger.py
rename to bam_masterdata/logger.py
diff --git a/bam_data_store/metadata/__init__.py b/bam_masterdata/metadata/__init__.py
similarity index 100%
rename from bam_data_store/metadata/__init__.py
rename to bam_masterdata/metadata/__init__.py
diff --git a/bam_data_store/metadata/definitions.py b/bam_masterdata/metadata/definitions.py
similarity index 100%
rename from bam_data_store/metadata/definitions.py
rename to bam_masterdata/metadata/definitions.py
diff --git a/bam_data_store/metadata/entities.py b/bam_masterdata/metadata/entities.py
similarity index 98%
rename from bam_data_store/metadata/entities.py
rename to bam_masterdata/metadata/entities.py
index 0104355..bd26fbd 100644
--- a/bam_data_store/metadata/entities.py
+++ b/bam_masterdata/metadata/entities.py
@@ -3,7 +3,7 @@
 
 from pydantic import BaseModel, ConfigDict, Field, model_validator
 
-from bam_data_store.metadata.definitions import (
+from bam_masterdata.metadata.definitions import (
     CollectionTypeDef,
     ObjectTypeDef,
     PropertyTypeAssignment,
diff --git a/bam_data_store/utils/__init__.py b/bam_masterdata/utils/__init__.py
similarity index 100%
rename from bam_data_store/utils/__init__.py
rename to bam_masterdata/utils/__init__.py
diff --git a/bam_data_store/utils/utils.py b/bam_masterdata/utils/utils.py
similarity index 99%
rename from bam_data_store/utils/utils.py
rename to bam_masterdata/utils/utils.py
index 4374c45..a28b983 100644
--- a/bam_data_store/utils/utils.py
+++ b/bam_masterdata/utils/utils.py
@@ -2,7 +2,6 @@
 import importlib.util
 import os
 import shutil
-import sys
 from typing import TYPE_CHECKING, Any
 
 if TYPE_CHECKING:
diff --git a/mkdocs.yml b/mkdocs.yml
index 7ad1f00..6baf6da 100644
--- a/mkdocs.yml
+++ b/mkdocs.yml
@@ -1,7 +1,7 @@
-site_name: BAM Data Store Wiki
-site_description: Documentation page for the BAM Data Store.
+site_name: BAM Masterdata
+site_description: Documentation page for the BAM Masterdata.
 site_author: BAM Data Store
-repo_url: https://github.com/BAMresearch/bam-data-store
+repo_url: https://github.com/BAMresearch/bam-masterdata
 nav:
   - Home: index.md
   - Tutorial:
diff --git a/pyproject.toml b/pyproject.toml
index 23acc2a..6f0d905 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -13,7 +13,7 @@ classifiers = [
   "Programming Language :: Python :: 3.11",
   "Programming Language :: Python :: 3.12",
 ]
-name = "bam-data-store"
+name = "bam-masterdata"
 description = "The BAM Data Store utility tools and masterdata models wrapped in a Python package with a front-end web interface."
 dynamic = ["version"]
 readme = "README.md"
@@ -33,8 +33,8 @@ dependencies = [
 ]
 
 [project.urls]
-"Homepage" = "https://git.bam.de/bam-data-store/bam-data-store"
-"Bug Tracker" = "https://git.bam.de/bam-data-store/development/bam-data-store/issues"
+"Homepage" = "https://github.com/BAMresearch/bam-masterdata"
+"Bug Tracker" = "https://github.com/BAMresearch/bam-masterdata/issues"
 
 [project.optional-dependencies]
 dev = [
@@ -59,11 +59,11 @@ docu = [
 ]
 
 [project.scripts]
-bam_data_store = "bam_data_store.cli:cli"
+bam_masterdata = "bam_masterdata.cli:cli"
 
 [tool.ruff]
 # Exclude a variety of commonly ignored directories.
-include = ["bam_data_store/*.py", "tests/*.py"]
+include = ["bam_masterdata/*.py", "tests/*.py"]
 exclude = [
     ".bzr",
     ".direnv",
@@ -143,4 +143,4 @@ exclude = ["dependencies*"]
 namespaces = false
 
 [tool.setuptools_scm]
-write_to = "bam_data_store/_version.py"
\ No newline at end of file
+write_to = "bam_masterdata/_version.py"
\ No newline at end of file
diff --git a/scripts/install_python_dependencies.sh b/scripts/install_python_dependencies.sh
index 08ecd77..f48d283 100755
--- a/scripts/install_python_dependencies.sh
+++ b/scripts/install_python_dependencies.sh
@@ -16,7 +16,7 @@ echo "Installing main project dependencies..."
 uv pip install -e '.[dev,docu,jupy]'
 
 echo "Installing submodule dependencies..."
-SUBMODULE_PATH="bam_data_store/dependencies/openbisschema"
+SUBMODULE_PATH="bam_masterdata/dependencies/openbisschema"
 
 if [ -d "$SUBMODULE_PATH" ]; then
     pushd "$SUBMODULE_PATH" > /dev/null
diff --git a/tests/conftest.py b/tests/conftest.py
index a979ef6..402c28f 100644
--- a/tests/conftest.py
+++ b/tests/conftest.py
@@ -3,14 +3,14 @@
 import pytest
 from pydantic import ConfigDict
 
-from bam_data_store.logger import log_storage
-from bam_data_store.metadata.definitions import (
+from bam_masterdata.logger import log_storage
+from bam_masterdata.metadata.definitions import (
     ObjectTypeDef,
     PropertyTypeAssignment,
     VocabularyTerm,
     VocabularyTypeDef,
 )
-from bam_data_store.metadata.entities import BaseEntity, ObjectType, VocabularyType
+from bam_masterdata.metadata.entities import BaseEntity, ObjectType, VocabularyType
 
 if os.getenv('_PYTEST_RAISE', '0') != '0':
 
diff --git a/tests/metadata/test_definitions.py b/tests/metadata/test_definitions.py
index 1fb3d8d..9a9bb56 100644
--- a/tests/metadata/test_definitions.py
+++ b/tests/metadata/test_definitions.py
@@ -2,7 +2,7 @@
 
 import pytest
 
-from bam_data_store.metadata.definitions import (
+from bam_masterdata.metadata.definitions import (
     BaseObjectTypeDef,
     CollectionTypeDef,
     DataSetTypeDef,
diff --git a/tests/test_logger.py b/tests/test_logger.py
index 47f9a8c..c57133c 100644
--- a/tests/test_logger.py
+++ b/tests/test_logger.py
@@ -2,7 +2,7 @@
 
 import pytest
 
-from bam_data_store.logger import logger
+from bam_masterdata.logger import logger
 
 
 @pytest.mark.parametrize(
diff --git a/tests/utils/test_utils.py b/tests/utils/test_utils.py
index da61983..3b2ea52 100644
--- a/tests/utils/test_utils.py
+++ b/tests/utils/test_utils.py
@@ -4,8 +4,8 @@
 
 import pytest
 
-from bam_data_store.logger import log_storage, logger
-from bam_data_store.utils import (
+from bam_masterdata.logger import logger
+from bam_masterdata.utils import (
     delete_and_create_dir,
     import_module,
     listdir_py_modules,