reportQaPheno.md

title	author	date	output	params
Quality Assurance Phenotypic Report	Contact:<a href = 'https://github.com/Breeding-Analytics/bioflow' target = '_blank'>Breeding Analytics Team, OneCGIAR</a> [email protected]	December 11, 2024	html_document	toDownload

Table of modifications

 

The following table shows the modifications that have been saved in your analysis object and that will be applied to the raw phenotypic data when this specific time stamp (ID) is selected/used in other analytical modules (e.g., single trial analysis module).

Trait:

Yield_Mg_ha <script type="application/json" data-for="qaPhenoApp_1-traitQa" data-nonempty="">{"plugins":["selectize-plugin-a11y"]}</script>

 

Boxplot of modifications

The following boxplot allows you to visualize which records were tagged as outliers and will be ignored in posterior analyses if this QA time stamp is selected in the posterior analyses.

 

Trait:

Yield_Mg_ha <script type="application/json" data-for="qaPhenoApp_1-traitQaBox" data-nonempty="">{"plugins":["selectize-plugin-a11y"]}</script>

References on methods used

Tukey, J. W. (1977). Exploratory Data Analysis. Section 2C.

McGill, R., Tukey, J. W. and Larsen, W. A. (1978). Variations of box plots. The American Statistician, 32, 12–16. doi:10.2307/2683468.

Velleman, P. F. and Hoaglin, D. C. (1981). Applications, Basics and Computing of Exploratory Data Analysis. Duxbury Press.