From 6f9a1d4d45fd7db45eebccbef26d82950db0b33f Mon Sep 17 00:00:00 2001 From: Remco de Boer <29308176+redeboer@users.noreply.github.com> Date: Sat, 2 Dec 2023 18:08:33 +0100 Subject: [PATCH 1/9] MAINT: test package on Python 3.12 --- pyproject.toml | 2 ++ 1 file changed, 2 insertions(+) diff --git a/pyproject.toml b/pyproject.toml index 96b3d857..246e9797 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -17,6 +17,7 @@ classifiers = [ "Operating System :: OS Independent", "Programming Language :: Python :: 3.10", "Programming Language :: Python :: 3.11", + "Programming Language :: Python :: 3.12", "Programming Language :: Python :: 3.8", "Programming Language :: Python :: 3.9", "Programming Language :: Python", @@ -202,6 +203,7 @@ preview = true target-version = [ "py310", "py311", + "py312", "py38", "py39", ] From c5bce30d7a1b45d7635bf45bd09de5543c4e9ead Mon Sep 17 00:00:00 2001 From: Remco de Boer <29308176+redeboer@users.noreply.github.com> Date: Sat, 2 Dec 2023 18:23:57 +0100 Subject: [PATCH 2/9] MAINT: trigger requirements workflow --- .constraints/py3.12.txt | 0 1 file changed, 0 insertions(+), 0 deletions(-) create mode 100644 .constraints/py3.12.txt diff --git a/.constraints/py3.12.txt b/.constraints/py3.12.txt new file mode 100644 index 00000000..e69de29b From 700b7fff5cc98cb76cec99ff321e86d81661a325 Mon Sep 17 00:00:00 2001 From: GitHub Date: Tue, 12 Mar 2024 19:47:18 +0000 Subject: [PATCH 3/9] MAINT: update pip constraints and pre-commit --- .constraints/py3.10.txt | 68 +++++------ .constraints/py3.11.txt | 68 +++++------ .constraints/py3.12.txt | 245 ++++++++++++++++++++++++++++++++++++++++ .constraints/py3.8.txt | 52 ++++----- .constraints/py3.9.txt | 70 ++++++------ .pre-commit-config.yaml | 4 +- 6 files changed, 367 insertions(+), 140 deletions(-) diff --git a/.constraints/py3.10.txt b/.constraints/py3.10.txt index d322f498..27488fe5 100644 --- a/.constraints/py3.10.txt +++ b/.constraints/py3.10.txt @@ -1,5 +1,5 @@ # This file was autogenerated by uv via the following command: -# uv pip compile pyproject.toml -o .constraints/py3.10.txt --all-extras --no-annotate --python-version=3.10 --no-emit-package setuptools +# uv pip compile pyproject.toml -o .constraints/py3.10.txt --all-extras --color=always --no-annotate --python-version=3.10 --no-emit-package setuptools absl-py==2.1.0 accessible-pygments==0.0.4 alabaster==0.7.16 @@ -26,7 +26,7 @@ charset-normalizer==3.3.2 click==8.1.7 cloudpickle==3.0.0 colorama==0.4.6 -comm==0.2.1 +comm==0.2.2 contourpy==1.2.0 coverage==7.4.3 cycler==0.12.1 @@ -42,18 +42,16 @@ execnet==2.0.2 executing==2.0.1 fastjsonschema==2.19.1 filelock==3.13.1 -flatbuffers==24.3.6 +flatbuffers==24.3.7 fonttools==4.49.0 fqdn==1.5.1 gast==0.5.4 gitdb==4.0.11 gitpython==3.1.42 -google-auth==2.28.1 -google-auth-oauthlib==1.2.0 google-pasta==0.2.0 graphviz==0.20.1 greenlet==3.0.3 -grpcio==1.62.0 +grpcio==1.62.1 h11==0.14.0 h5py==3.10.0 hepunits==2.3.3 @@ -82,23 +80,23 @@ jsonschema==4.21.1 jsonschema-specifications==2023.12.1 jupyter==1.0.0 jupyter-cache==1.0.0 -jupyter-client==8.6.0 +jupyter-client==8.6.1 jupyter-console==6.6.3 -jupyter-core==5.7.1 -jupyter-events==0.9.0 +jupyter-core==5.7.2 +jupyter-events==0.9.1 jupyter-lsp==2.2.4 jupyter-server==2.13.0 jupyter-server-mathjax==0.2.6 -jupyter-server-terminals==0.5.2 +jupyter-server-terminals==0.5.3 jupyterlab==4.1.4 jupyterlab-code-formatter==2.2.1 jupyterlab-git==0.50.0 jupyterlab-lsp==5.1.0 jupyterlab-myst==2.3.1 jupyterlab-pygments==0.3.0 -jupyterlab-server==2.25.3 +jupyterlab-server==2.25.4 jupyterlab-widgets==3.0.10 -keras==2.15.0 +keras==3.0.5 kiwisolver==1.4.5 libclang==16.0.6 livereload==2.6.3 @@ -112,16 +110,17 @@ matplotlib-inline==0.1.6 mdit-py-plugins==0.4.0 mdurl==0.1.2 mistune==3.0.2 -ml-dtypes==0.2.0 +ml-dtypes==0.3.2 mpmath==1.3.0 -mypy==1.8.0 +mypy==1.9.0 mypy-extensions==1.0.0 myst-nb==1.0.0 myst-parser==2.0.0 +namex==0.0.7 nbclient==0.6.8 nbconvert==7.16.2 nbdime==4.0.1 -nbformat==5.9.2 +nbformat==5.10.2 nbmake==1.5.3 nest-asyncio==1.6.0 nodeenv==1.8.0 @@ -129,10 +128,9 @@ notebook==7.1.1 notebook-shim==0.2.4 numba==0.59.0 numpy==1.26.4 -oauthlib==3.2.2 opt-einsum==3.3.0 overrides==7.7.0 -packaging==23.2 +packaging==24.0 pandas==2.2.1 pandocfilters==1.5.1 parso==0.8.3 @@ -151,15 +149,13 @@ psutil==5.9.8 ptyprocess==0.7.0 pure-eval==0.2.2 py-cpuinfo==9.0.0 -pyarrow==15.0.0 -pyasn1==0.5.1 -pyasn1-modules==0.3.0 +pyarrow==15.0.1 pycparser==2.21 pydata-sphinx-theme==0.15.2 pygments==2.17.2 pyparsing==3.1.2 pyproject-api==1.6.1 -pytest==8.0.2 +pytest==8.1.1 pytest-benchmark==4.0.0 pytest-cov==4.1.0 pytest-mock==3.12.0 @@ -179,13 +175,12 @@ qtconsole==5.5.1 qtpy==2.4.1 referencing==0.33.0 requests==2.31.0 -requests-oauthlib==1.3.1 rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 +rich==13.7.1 rope==1.12.0 rpds-py==0.18.0 -rsa==4.9 -ruff==0.3.1 +ruff==0.3.2 scipy==1.12.0 send2trash==1.8.2 six==1.16.0 @@ -214,25 +209,24 @@ sqlalchemy==2.0.28 stack-data==0.6.3 sympy==1.12 tabulate==0.9.0 -tensorboard==2.15.2 +tensorboard==2.16.2 tensorboard-data-server==0.7.2 -tensorflow==2.15.0 -tensorflow-estimator==2.15.0 +tensorflow==2.16.1 tensorflow-io-gcs-filesystem==0.36.0 -tensorflow-probability==0.23.0 +tensorflow-probability==0.24.0 termcolor==2.4.0 -terminado==0.18.0 +terminado==0.18.1 tinycss2==1.2.1 tomli==2.0.1 tornado==6.4 tox==4.14.1 tqdm==4.66.2 -traitlets==5.14.1 -types-protobuf==4.24.0.20240302 -types-python-dateutil==2.8.19.20240106 -types-pyyaml==6.0.12.12 -types-requests==2.31.0.20240218 -types-tensorflow==2.15.0.20240303 +traitlets==5.14.2 +types-protobuf==4.24.0.20240311 +types-python-dateutil==2.8.19.20240311 +types-pyyaml==6.0.12.20240311 +types-requests==2.31.0.20240311 +types-tensorflow==2.15.0.20240311 types-tqdm==4.66.0.20240106 typing-extensions==4.10.0 tzdata==2024.1 @@ -245,9 +239,9 @@ webcolors==1.13 webencodings==0.5.1 websocket-client==1.7.0 werkzeug==3.0.1 -wheel==0.42.0 +wheel==0.43.0 widgetsnbextension==4.0.10 -wrapt==1.14.1 +wrapt==1.16.0 zipp==3.17.0 # The following packages were excluded from the output: diff --git a/.constraints/py3.11.txt b/.constraints/py3.11.txt index 8ca40c16..0750fd5f 100644 --- a/.constraints/py3.11.txt +++ b/.constraints/py3.11.txt @@ -1,5 +1,5 @@ # This file was autogenerated by uv via the following command: -# uv pip compile pyproject.toml -o .constraints/py3.11.txt --all-extras --no-annotate --python-version=3.11 --no-emit-package setuptools +# uv pip compile pyproject.toml -o .constraints/py3.11.txt --all-extras --color=always --no-annotate --python-version=3.11 --no-emit-package setuptools absl-py==2.1.0 accessible-pygments==0.0.4 alabaster==0.7.16 @@ -26,7 +26,7 @@ charset-normalizer==3.3.2 click==8.1.7 cloudpickle==3.0.0 colorama==0.4.6 -comm==0.2.1 +comm==0.2.2 contourpy==1.2.0 coverage==7.4.3 cycler==0.12.1 @@ -41,18 +41,16 @@ execnet==2.0.2 executing==2.0.1 fastjsonschema==2.19.1 filelock==3.13.1 -flatbuffers==24.3.6 +flatbuffers==24.3.7 fonttools==4.49.0 fqdn==1.5.1 gast==0.5.4 gitdb==4.0.11 gitpython==3.1.42 -google-auth==2.28.1 -google-auth-oauthlib==1.2.0 google-pasta==0.2.0 graphviz==0.20.1 greenlet==3.0.3 -grpcio==1.62.0 +grpcio==1.62.1 h11==0.14.0 h5py==3.10.0 hepunits==2.3.3 @@ -81,23 +79,23 @@ jsonschema==4.21.1 jsonschema-specifications==2023.12.1 jupyter==1.0.0 jupyter-cache==1.0.0 -jupyter-client==8.6.0 +jupyter-client==8.6.1 jupyter-console==6.6.3 -jupyter-core==5.7.1 -jupyter-events==0.9.0 +jupyter-core==5.7.2 +jupyter-events==0.9.1 jupyter-lsp==2.2.4 jupyter-server==2.13.0 jupyter-server-mathjax==0.2.6 -jupyter-server-terminals==0.5.2 +jupyter-server-terminals==0.5.3 jupyterlab==4.1.4 jupyterlab-code-formatter==2.2.1 jupyterlab-git==0.50.0 jupyterlab-lsp==5.1.0 jupyterlab-myst==2.3.1 jupyterlab-pygments==0.3.0 -jupyterlab-server==2.25.3 +jupyterlab-server==2.25.4 jupyterlab-widgets==3.0.10 -keras==2.15.0 +keras==3.0.5 kiwisolver==1.4.5 libclang==16.0.6 livereload==2.6.3 @@ -111,16 +109,17 @@ matplotlib-inline==0.1.6 mdit-py-plugins==0.4.0 mdurl==0.1.2 mistune==3.0.2 -ml-dtypes==0.2.0 +ml-dtypes==0.3.2 mpmath==1.3.0 -mypy==1.8.0 +mypy==1.9.0 mypy-extensions==1.0.0 myst-nb==1.0.0 myst-parser==2.0.0 +namex==0.0.7 nbclient==0.6.8 nbconvert==7.16.2 nbdime==4.0.1 -nbformat==5.9.2 +nbformat==5.10.2 nbmake==1.5.3 nest-asyncio==1.6.0 nodeenv==1.8.0 @@ -128,10 +127,9 @@ notebook==7.1.1 notebook-shim==0.2.4 numba==0.59.0 numpy==1.26.4 -oauthlib==3.2.2 opt-einsum==3.3.0 overrides==7.7.0 -packaging==23.2 +packaging==24.0 pandas==2.2.1 pandocfilters==1.5.1 parso==0.8.3 @@ -150,15 +148,13 @@ psutil==5.9.8 ptyprocess==0.7.0 pure-eval==0.2.2 py-cpuinfo==9.0.0 -pyarrow==15.0.0 -pyasn1==0.5.1 -pyasn1-modules==0.3.0 +pyarrow==15.0.1 pycparser==2.21 pydata-sphinx-theme==0.15.2 pygments==2.17.2 pyparsing==3.1.2 pyproject-api==1.6.1 -pytest==8.0.2 +pytest==8.1.1 pytest-benchmark==4.0.0 pytest-cov==4.1.0 pytest-mock==3.12.0 @@ -178,13 +174,12 @@ qtconsole==5.5.1 qtpy==2.4.1 referencing==0.33.0 requests==2.31.0 -requests-oauthlib==1.3.1 rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 +rich==13.7.1 rope==1.12.0 rpds-py==0.18.0 -rsa==4.9 -ruff==0.3.1 +ruff==0.3.2 scipy==1.12.0 send2trash==1.8.2 six==1.16.0 @@ -213,24 +208,23 @@ sqlalchemy==2.0.28 stack-data==0.6.3 sympy==1.12 tabulate==0.9.0 -tensorboard==2.15.2 +tensorboard==2.16.2 tensorboard-data-server==0.7.2 -tensorflow==2.15.0 -tensorflow-estimator==2.15.0 +tensorflow==2.16.1 tensorflow-io-gcs-filesystem==0.36.0 -tensorflow-probability==0.23.0 +tensorflow-probability==0.24.0 termcolor==2.4.0 -terminado==0.18.0 +terminado==0.18.1 tinycss2==1.2.1 tornado==6.4 tox==4.14.1 tqdm==4.66.2 -traitlets==5.14.1 -types-protobuf==4.24.0.20240302 -types-python-dateutil==2.8.19.20240106 -types-pyyaml==6.0.12.12 -types-requests==2.31.0.20240218 -types-tensorflow==2.15.0.20240303 +traitlets==5.14.2 +types-protobuf==4.24.0.20240311 +types-python-dateutil==2.8.19.20240311 +types-pyyaml==6.0.12.20240311 +types-requests==2.31.0.20240311 +types-tensorflow==2.15.0.20240311 types-tqdm==4.66.0.20240106 typing-extensions==4.10.0 tzdata==2024.1 @@ -243,9 +237,9 @@ webcolors==1.13 webencodings==0.5.1 websocket-client==1.7.0 werkzeug==3.0.1 -wheel==0.42.0 +wheel==0.43.0 widgetsnbextension==4.0.10 -wrapt==1.14.1 +wrapt==1.16.0 zipp==3.17.0 # The following packages were excluded from the output: diff --git a/.constraints/py3.12.txt b/.constraints/py3.12.txt index e69de29b..187aa64c 100644 --- a/.constraints/py3.12.txt +++ b/.constraints/py3.12.txt @@ -0,0 +1,245 @@ +# This file was autogenerated by uv via the following command: +# uv pip compile pyproject.toml -o .constraints/py3.12.txt --all-extras --color=always --no-annotate --python-version=3.12 --no-emit-package setuptools +absl-py==2.1.0 +accessible-pygments==0.0.4 +alabaster==0.7.16 +ampform==0.15.0 +anyio==4.3.0 +argon2-cffi==23.1.0 +argon2-cffi-bindings==21.2.0 +arrow==1.3.0 +asttokens==2.4.1 +astunparse==1.6.3 +async-lru==2.0.4 +attrs==23.2.0 +babel==2.14.0 +beautifulsoup4==4.12.3 +black==24.2.0 +bleach==6.1.0 +cachetools==5.3.3 +cattrs==23.2.3 +certifi==2024.2.2 +cffi==1.16.0 +cfgv==3.4.0 +chardet==5.2.0 +charset-normalizer==3.3.2 +click==8.1.7 +cloudpickle==3.0.0 +colorama==0.4.6 +comm==0.2.2 +contourpy==1.2.0 +coverage==7.4.3 +cycler==0.12.1 +debugpy==1.8.1 +decorator==5.1.1 +defusedxml==0.7.1 +distlib==0.3.8 +dm-tree==0.1.8 +docstring-to-markdown==0.15 +docutils==0.20.1 +execnet==2.0.2 +executing==2.0.1 +fastjsonschema==2.19.1 +filelock==3.13.1 +flatbuffers==24.3.7 +fonttools==4.49.0 +fqdn==1.5.1 +gast==0.5.4 +gitdb==4.0.11 +gitpython==3.1.42 +google-pasta==0.2.0 +graphviz==0.20.1 +greenlet==3.0.3 +grpcio==1.62.1 +h11==0.14.0 +h5py==3.10.0 +hepunits==2.3.3 +httpcore==1.0.4 +httpx==0.27.0 +identify==2.5.35 +idna==3.6 +imagesize==1.4.1 +iminuit==2.25.2 +importlib-metadata==7.0.2 +iniconfig==2.0.0 +ipykernel==6.29.3 +ipympl==0.9.3 +ipython==8.22.2 +ipython-genutils==0.2.0 +ipywidgets==8.1.2 +isoduration==20.11.0 +isort==5.13.2 +jax==0.4.25 +jaxlib==0.4.25 +jedi==0.19.1 +jinja2==3.1.3 +json5==0.9.22 +jsonpointer==2.4 +jsonschema==4.21.1 +jsonschema-specifications==2023.12.1 +jupyter==1.0.0 +jupyter-cache==1.0.0 +jupyter-client==8.6.1 +jupyter-console==6.6.3 +jupyter-core==5.7.2 +jupyter-events==0.9.1 +jupyter-lsp==2.2.4 +jupyter-server==2.13.0 +jupyter-server-mathjax==0.2.6 +jupyter-server-terminals==0.5.3 +jupyterlab==4.1.4 +jupyterlab-code-formatter==2.2.1 +jupyterlab-git==0.50.0 +jupyterlab-lsp==5.1.0 +jupyterlab-myst==2.3.1 +jupyterlab-pygments==0.3.0 +jupyterlab-server==2.25.4 +jupyterlab-widgets==3.0.10 +keras==3.0.5 +kiwisolver==1.4.5 +libclang==16.0.6 +livereload==2.6.3 +llvmlite==0.42.0 +lsprotocol==2023.0.1 +markdown==3.5.2 +markdown-it-py==3.0.0 +markupsafe==2.1.5 +matplotlib==3.8.3 +matplotlib-inline==0.1.6 +mdit-py-plugins==0.4.0 +mdurl==0.1.2 +mistune==3.0.2 +ml-dtypes==0.3.2 +mpmath==1.3.0 +mypy==1.9.0 +mypy-extensions==1.0.0 +myst-nb==1.0.0 +myst-parser==2.0.0 +namex==0.0.7 +nbclient==0.6.8 +nbconvert==7.16.2 +nbdime==4.0.1 +nbformat==5.10.2 +nbmake==1.5.3 +nest-asyncio==1.6.0 +nodeenv==1.8.0 +notebook==7.1.1 +notebook-shim==0.2.4 +numba==0.59.0 +numpy==1.26.4 +opt-einsum==3.3.0 +overrides==7.7.0 +packaging==24.0 +pandas==2.2.1 +pandocfilters==1.5.1 +parso==0.8.3 +particle==0.23.1 +pathspec==0.12.1 +pexpect==4.9.0 +phasespace==1.9.0 +pillow==10.2.0 +platformdirs==4.2.0 +pluggy==1.4.0 +pre-commit==3.6.2 +prometheus-client==0.20.0 +prompt-toolkit==3.0.43 +protobuf==4.25.3 +psutil==5.9.8 +ptyprocess==0.7.0 +pure-eval==0.2.2 +py-cpuinfo==9.0.0 +pyarrow==15.0.1 +pycparser==2.21 +pydata-sphinx-theme==0.15.2 +pygments==2.17.2 +pyparsing==3.1.2 +pyproject-api==1.6.1 +pytest==8.1.1 +pytest-benchmark==4.0.0 +pytest-cov==4.1.0 +pytest-mock==3.12.0 +pytest-xdist==3.5.0 +python-constraint==1.3.1 +python-dateutil==2.9.0.post0 +python-json-logger==2.0.7 +python-lsp-jsonrpc==1.1.2 +python-lsp-ruff==2.2.0 +python-lsp-server==1.10.0 +pytoolconfig==1.3.1 +pytz==2024.1 +pyyaml==6.0.1 +pyzmq==25.1.2 +qrules==0.10.1 +qtconsole==5.5.1 +qtpy==2.4.1 +referencing==0.33.0 +requests==2.31.0 +rfc3339-validator==0.1.4 +rfc3986-validator==0.1.1 +rich==13.7.1 +rope==1.12.0 +rpds-py==0.18.0 +ruff==0.3.2 +scipy==1.12.0 +send2trash==1.8.2 +six==1.16.0 +smmap==5.0.1 +sniffio==1.3.1 +snowballstemmer==2.2.0 +soupsieve==2.5 +sphinx==7.2.6 +sphinx-api-relink==0.0.8 +sphinx-autobuild==2024.2.4 +sphinx-book-theme==1.1.2 +sphinx-codeautolink==0.15.0 +sphinx-comments==0.0.3 +sphinx-copybutton==0.5.2 +sphinx-design==0.5.0 +sphinx-thebe==0.3.1 +sphinx-togglebutton==0.3.2 +sphinxcontrib-applehelp==1.0.8 +sphinxcontrib-devhelp==1.0.6 +sphinxcontrib-htmlhelp==2.0.5 +sphinxcontrib-jsmath==1.0.1 +sphinxcontrib-qthelp==1.0.7 +sphinxcontrib-serializinghtml==1.1.10 +sphobjinv==2.3.1 +sqlalchemy==2.0.28 +stack-data==0.6.3 +sympy==1.12 +tabulate==0.9.0 +tensorboard==2.16.2 +tensorboard-data-server==0.7.2 +tensorflow==2.16.1 +tensorflow-probability==0.24.0 +termcolor==2.4.0 +terminado==0.18.1 +tinycss2==1.2.1 +tornado==6.4 +tox==4.14.1 +tqdm==4.66.2 +traitlets==5.14.2 +types-protobuf==4.24.0.20240311 +types-python-dateutil==2.8.19.20240311 +types-pyyaml==6.0.12.20240311 +types-requests==2.31.0.20240311 +types-tensorflow==2.15.0.20240311 +types-tqdm==4.66.0.20240106 +typing-extensions==4.10.0 +tzdata==2024.1 +ujson==5.9.0 +uri-template==1.3.0 +urllib3==2.2.1 +virtualenv==20.25.1 +wcwidth==0.2.13 +webcolors==1.13 +webencodings==0.5.1 +websocket-client==1.7.0 +werkzeug==3.0.1 +wheel==0.43.0 +widgetsnbextension==4.0.10 +wrapt==1.16.0 +zipp==3.17.0 + +# The following packages were excluded from the output: +# setuptools diff --git a/.constraints/py3.8.txt b/.constraints/py3.8.txt index 5720efe6..7cf7e7b8 100644 --- a/.constraints/py3.8.txt +++ b/.constraints/py3.8.txt @@ -1,5 +1,5 @@ # This file was autogenerated by uv via the following command: -# uv pip compile pyproject.toml -o .constraints/py3.8.txt --all-extras --no-annotate --python-version=3.8 --no-emit-package setuptools +# uv pip compile pyproject.toml -o .constraints/py3.8.txt --all-extras --color=always --no-annotate --python-version=3.8 --no-emit-package setuptools absl-py==2.1.0 accessible-pygments==0.0.4 alabaster==0.7.13 @@ -27,7 +27,7 @@ charset-normalizer==3.3.2 click==8.1.7 cloudpickle==3.0.0 colorama==0.4.6 -comm==0.2.1 +comm==0.2.2 contourpy==1.1.1 coverage==7.4.3 cycler==0.12.1 @@ -43,18 +43,18 @@ execnet==2.0.2 executing==2.0.1 fastjsonschema==2.19.1 filelock==3.13.1 -flatbuffers==24.3.6 +flatbuffers==24.3.7 fonttools==4.49.0 fqdn==1.5.1 gast==0.4.0 gitdb==4.0.11 gitpython==3.1.42 -google-auth==2.28.1 +google-auth==2.28.2 google-auth-oauthlib==0.4.6 google-pasta==0.2.0 graphviz==0.20.1 greenlet==3.0.3 -grpcio==1.62.0 +grpcio==1.62.1 h11==0.14.0 h5py==3.10.0 hepunits==2.3.3 @@ -65,7 +65,7 @@ idna==3.6 imagesize==1.4.1 iminuit==2.25.2 importlib-metadata==7.0.2 -importlib-resources==6.1.3 +importlib-resources==6.2.0 iniconfig==2.0.0 ipykernel==6.29.3 ipympl==0.9.3 @@ -84,21 +84,21 @@ jsonschema==4.21.1 jsonschema-specifications==2023.12.1 jupyter==1.0.0 jupyter-cache==0.6.1 -jupyter-client==8.6.0 +jupyter-client==8.6.1 jupyter-console==6.6.3 -jupyter-core==5.7.1 -jupyter-events==0.9.0 +jupyter-core==5.7.2 +jupyter-events==0.9.1 jupyter-lsp==2.2.4 jupyter-server==2.13.0 jupyter-server-mathjax==0.2.6 -jupyter-server-terminals==0.5.2 +jupyter-server-terminals==0.5.3 jupyterlab==4.1.4 jupyterlab-code-formatter==2.2.1 jupyterlab-git==0.50.0 jupyterlab-lsp==5.1.0 jupyterlab-myst==2.3.1 jupyterlab-pygments==0.3.0 -jupyterlab-server==2.25.3 +jupyterlab-server==2.25.4 jupyterlab-widgets==3.0.10 keras==2.11.0 kiwisolver==1.4.5 @@ -116,14 +116,14 @@ mdurl==0.1.2 mistune==3.0.2 ml-dtypes==0.2.0 mpmath==1.3.0 -mypy==1.8.0 +mypy==1.9.0 mypy-extensions==1.0.0 myst-nb==0.17.2 myst-parser==0.18.1 nbclient==0.6.8 nbconvert==7.16.2 nbdime==4.0.1 -nbformat==5.9.2 +nbformat==5.10.2 nbmake==1.5.3 nest-asyncio==1.6.0 nodeenv==1.8.0 @@ -134,7 +134,7 @@ numpy==1.24.4 oauthlib==3.2.2 opt-einsum==3.3.0 overrides==7.7.0 -packaging==23.2 +packaging==24.0 pandas==2.0.3 pandocfilters==1.5.1 parso==0.8.3 @@ -155,7 +155,7 @@ psutil==5.9.8 ptyprocess==0.7.0 pure-eval==0.2.2 py-cpuinfo==9.0.0 -pyarrow==15.0.0 +pyarrow==15.0.1 pyasn1==0.5.1 pyasn1-modules==0.3.0 pycparser==2.21 @@ -163,7 +163,7 @@ pydata-sphinx-theme==0.14.4 pygments==2.17.2 pyparsing==3.1.2 pyproject-api==1.6.1 -pytest==8.0.2 +pytest==8.1.1 pytest-benchmark==4.0.0 pytest-cov==4.1.0 pytest-mock==3.12.0 @@ -183,13 +183,13 @@ qtconsole==5.5.1 qtpy==2.4.1 referencing==0.33.0 requests==2.31.0 -requests-oauthlib==1.3.1 +requests-oauthlib==1.4.0 rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 rope==1.12.0 rpds-py==0.18.0 rsa==4.9 -ruff==0.3.1 +ruff==0.3.2 scipy==1.10.1 send2trash==1.8.2 six==1.16.0 @@ -226,18 +226,18 @@ tensorflow-estimator==2.11.0 tensorflow-io-gcs-filesystem==0.34.0 tensorflow-probability==0.20.1 termcolor==2.4.0 -terminado==0.18.0 +terminado==0.18.1 tinycss2==1.2.1 tomli==2.0.1 tornado==6.4 tox==4.14.1 tqdm==4.66.2 -traitlets==5.14.1 -types-protobuf==4.24.0.20240302 -types-python-dateutil==2.8.19.20240106 -types-pyyaml==6.0.12.12 -types-requests==2.31.0.20240218 -types-tensorflow==2.15.0.20240303 +traitlets==5.14.2 +types-protobuf==4.24.0.20240311 +types-python-dateutil==2.8.19.20240311 +types-pyyaml==6.0.12.20240311 +types-requests==2.31.0.20240311 +types-tensorflow==2.15.0.20240311 types-tqdm==4.66.0.20240106 typing-extensions==4.10.0 tzdata==2024.1 @@ -250,7 +250,7 @@ webcolors==1.13 webencodings==0.5.1 websocket-client==1.7.0 werkzeug==3.0.1 -wheel==0.42.0 +wheel==0.43.0 widgetsnbextension==4.0.10 wrapt==1.16.0 zipp==3.17.0 diff --git a/.constraints/py3.9.txt b/.constraints/py3.9.txt index e33d7e93..31df0068 100644 --- a/.constraints/py3.9.txt +++ b/.constraints/py3.9.txt @@ -1,5 +1,5 @@ # This file was autogenerated by uv via the following command: -# uv pip compile pyproject.toml -o .constraints/py3.9.txt --all-extras --no-annotate --python-version=3.9 --no-emit-package setuptools +# uv pip compile pyproject.toml -o .constraints/py3.9.txt --all-extras --color=always --no-annotate --python-version=3.9 --no-emit-package setuptools absl-py==2.1.0 accessible-pygments==0.0.4 alabaster==0.7.16 @@ -26,7 +26,7 @@ charset-normalizer==3.3.2 click==8.1.7 cloudpickle==3.0.0 colorama==0.4.6 -comm==0.2.1 +comm==0.2.2 contourpy==1.2.0 coverage==7.4.3 cycler==0.12.1 @@ -42,18 +42,16 @@ execnet==2.0.2 executing==2.0.1 fastjsonschema==2.19.1 filelock==3.13.1 -flatbuffers==24.3.6 +flatbuffers==24.3.7 fonttools==4.49.0 fqdn==1.5.1 gast==0.5.4 gitdb==4.0.11 gitpython==3.1.42 -google-auth==2.28.1 -google-auth-oauthlib==1.2.0 google-pasta==0.2.0 graphviz==0.20.1 greenlet==3.0.3 -grpcio==1.62.0 +grpcio==1.62.1 h11==0.14.0 h5py==3.10.0 hepunits==2.3.3 @@ -64,7 +62,7 @@ idna==3.6 imagesize==1.4.1 iminuit==2.25.2 importlib-metadata==7.0.2 -importlib-resources==6.1.3 +importlib-resources==6.2.0 iniconfig==2.0.0 ipykernel==6.29.3 ipympl==0.9.3 @@ -83,23 +81,23 @@ jsonschema==4.21.1 jsonschema-specifications==2023.12.1 jupyter==1.0.0 jupyter-cache==1.0.0 -jupyter-client==8.6.0 +jupyter-client==8.6.1 jupyter-console==6.6.3 -jupyter-core==5.7.1 -jupyter-events==0.9.0 +jupyter-core==5.7.2 +jupyter-events==0.9.1 jupyter-lsp==2.2.4 jupyter-server==2.13.0 jupyter-server-mathjax==0.2.6 -jupyter-server-terminals==0.5.2 +jupyter-server-terminals==0.5.3 jupyterlab==4.1.4 jupyterlab-code-formatter==2.2.1 jupyterlab-git==0.50.0 jupyterlab-lsp==5.1.0 jupyterlab-myst==2.3.1 jupyterlab-pygments==0.3.0 -jupyterlab-server==2.25.3 +jupyterlab-server==2.25.4 jupyterlab-widgets==3.0.10 -keras==2.15.0 +keras==3.0.5 kiwisolver==1.4.5 libclang==16.0.6 livereload==2.6.3 @@ -113,16 +111,17 @@ matplotlib-inline==0.1.6 mdit-py-plugins==0.4.0 mdurl==0.1.2 mistune==3.0.2 -ml-dtypes==0.2.0 +ml-dtypes==0.3.2 mpmath==1.3.0 -mypy==1.8.0 +mypy==1.9.0 mypy-extensions==1.0.0 myst-nb==1.0.0 myst-parser==2.0.0 +namex==0.0.7 nbclient==0.6.8 nbconvert==7.16.2 nbdime==4.0.1 -nbformat==5.9.2 +nbformat==5.10.2 nbmake==1.5.3 nest-asyncio==1.6.0 nodeenv==1.8.0 @@ -130,10 +129,9 @@ notebook==7.1.1 notebook-shim==0.2.4 numba==0.59.0 numpy==1.26.4 -oauthlib==3.2.2 opt-einsum==3.3.0 overrides==7.7.0 -packaging==23.2 +packaging==24.0 pandas==2.2.1 pandocfilters==1.5.1 parso==0.8.3 @@ -152,15 +150,13 @@ psutil==5.9.8 ptyprocess==0.7.0 pure-eval==0.2.2 py-cpuinfo==9.0.0 -pyarrow==15.0.0 -pyasn1==0.5.1 -pyasn1-modules==0.3.0 +pyarrow==15.0.1 pycparser==2.21 pydata-sphinx-theme==0.15.2 pygments==2.17.2 pyparsing==3.1.2 pyproject-api==1.6.1 -pytest==8.0.2 +pytest==8.1.1 pytest-benchmark==4.0.0 pytest-cov==4.1.0 pytest-mock==3.12.0 @@ -180,13 +176,12 @@ qtconsole==5.5.1 qtpy==2.4.1 referencing==0.33.0 requests==2.31.0 -requests-oauthlib==1.3.1 rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 +rich==13.7.1 rope==1.12.0 rpds-py==0.18.0 -rsa==4.9 -ruff==0.3.1 +ruff==0.3.2 scipy==1.12.0 send2trash==1.8.2 six==1.16.0 @@ -215,25 +210,24 @@ sqlalchemy==2.0.28 stack-data==0.6.3 sympy==1.12 tabulate==0.9.0 -tensorboard==2.15.2 +tensorboard==2.16.2 tensorboard-data-server==0.7.2 -tensorflow==2.15.0 -tensorflow-estimator==2.15.0 +tensorflow==2.16.1 tensorflow-io-gcs-filesystem==0.36.0 -tensorflow-probability==0.23.0 +tensorflow-probability==0.24.0 termcolor==2.4.0 -terminado==0.18.0 +terminado==0.18.1 tinycss2==1.2.1 tomli==2.0.1 tornado==6.4 tox==4.14.1 tqdm==4.66.2 -traitlets==5.14.1 -types-protobuf==4.24.0.20240302 -types-python-dateutil==2.8.19.20240106 -types-pyyaml==6.0.12.12 -types-requests==2.31.0.20240218 -types-tensorflow==2.15.0.20240303 +traitlets==5.14.2 +types-protobuf==4.24.0.20240311 +types-python-dateutil==2.8.19.20240311 +types-pyyaml==6.0.12.20240311 +types-requests==2.31.0.20240311 +types-tensorflow==2.15.0.20240311 types-tqdm==4.66.0.20240106 typing-extensions==4.10.0 tzdata==2024.1 @@ -246,9 +240,9 @@ webcolors==1.13 webencodings==0.5.1 websocket-client==1.7.0 werkzeug==3.0.1 -wheel==0.42.0 +wheel==0.43.0 widgetsnbextension==4.0.10 -wrapt==1.14.1 +wrapt==1.16.0 zipp==3.17.0 # The following packages were excluded from the output: diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 9217a793..4e2b1661 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -60,7 +60,7 @@ repos: - --extras-require=doc,jax,pwa,viz - repo: https://github.com/astral-sh/ruff-pre-commit - rev: v0.3.1 + rev: v0.3.2 hooks: - id: ruff args: [--fix] @@ -152,6 +152,6 @@ repos: - python - repo: https://github.com/ComPWA/mirrors-pyright - rev: v1.1.352 + rev: v1.1.353 hooks: - id: pyright From 9b6caf1d7657241b1eb8de492571bdaabaf82ac6 Mon Sep 17 00:00:00 2001 From: Remco de Boer <29308176+redeboer@users.noreply.github.com> Date: Tue, 12 Mar 2024 21:33:33 +0100 Subject: [PATCH 4/9] FIX: remove `PytestRemovedIn8Warning` ignore --- pyproject.toml | 1 - 1 file changed, 1 deletion(-) diff --git a/pyproject.toml b/pyproject.toml index 42b3345f..1a86c9e7 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -268,7 +268,6 @@ filterwarnings = [ "ignore:.*the imp module is deprecated in favour of importlib.*:DeprecationWarning", "ignore:Passing a schema to Validator.iter_errors is deprecated.*:DeprecationWarning", "ignore:Please use `spmatrix` from the `scipy.sparse` namespace.*:DeprecationWarning", - "ignore:The .* argument to NotebookFile is deprecated.*:pytest.PytestRemovedIn8Warning", "ignore:The distutils package is deprecated and slated for removal.*:DeprecationWarning", "ignore:divide by zero encountered in divide:RuntimeWarning", "ignore:divide by zero encountered in true_divide:RuntimeWarning", From 3fb43f6a93605b2528b1bc6a983c84f647778df5 Mon Sep 17 00:00:00 2001 From: GitHub Date: Tue, 12 Mar 2024 20:38:06 +0000 Subject: [PATCH 5/9] MAINT: update pip constraints and pre-commit --- .constraints/py3.10.txt | 2 +- .constraints/py3.11.txt | 2 +- .constraints/py3.12.txt | 2 +- .constraints/py3.8.txt | 2 +- .constraints/py3.9.txt | 2 +- 5 files changed, 5 insertions(+), 5 deletions(-) diff --git a/.constraints/py3.10.txt b/.constraints/py3.10.txt index 27488fe5..27716ac0 100644 --- a/.constraints/py3.10.txt +++ b/.constraints/py3.10.txt @@ -1,5 +1,5 @@ # This file was autogenerated by uv via the following command: -# uv pip compile pyproject.toml -o .constraints/py3.10.txt --all-extras --color=always --no-annotate --python-version=3.10 --no-emit-package setuptools +# uv pip compile pyproject.toml -o .constraints/py3.10.txt --all-extras --no-annotate --python-version=3.10 --no-emit-package setuptools absl-py==2.1.0 accessible-pygments==0.0.4 alabaster==0.7.16 diff --git a/.constraints/py3.11.txt b/.constraints/py3.11.txt index 0750fd5f..bad5668b 100644 --- a/.constraints/py3.11.txt +++ b/.constraints/py3.11.txt @@ -1,5 +1,5 @@ # This file was autogenerated by uv via the following command: -# uv pip compile pyproject.toml -o .constraints/py3.11.txt --all-extras --color=always --no-annotate --python-version=3.11 --no-emit-package setuptools +# uv pip compile pyproject.toml -o .constraints/py3.11.txt --all-extras --no-annotate --python-version=3.11 --no-emit-package setuptools absl-py==2.1.0 accessible-pygments==0.0.4 alabaster==0.7.16 diff --git a/.constraints/py3.12.txt b/.constraints/py3.12.txt index 187aa64c..7b3a9b5d 100644 --- a/.constraints/py3.12.txt +++ b/.constraints/py3.12.txt @@ -1,5 +1,5 @@ # This file was autogenerated by uv via the following command: -# uv pip compile pyproject.toml -o .constraints/py3.12.txt --all-extras --color=always --no-annotate --python-version=3.12 --no-emit-package setuptools +# uv pip compile pyproject.toml -o .constraints/py3.12.txt --all-extras --no-annotate --python-version=3.12 --no-emit-package setuptools absl-py==2.1.0 accessible-pygments==0.0.4 alabaster==0.7.16 diff --git a/.constraints/py3.8.txt b/.constraints/py3.8.txt index 7cf7e7b8..e057f358 100644 --- a/.constraints/py3.8.txt +++ b/.constraints/py3.8.txt @@ -1,5 +1,5 @@ # This file was autogenerated by uv via the following command: -# uv pip compile pyproject.toml -o .constraints/py3.8.txt --all-extras --color=always --no-annotate --python-version=3.8 --no-emit-package setuptools +# uv pip compile pyproject.toml -o .constraints/py3.8.txt --all-extras --no-annotate --python-version=3.8 --no-emit-package setuptools absl-py==2.1.0 accessible-pygments==0.0.4 alabaster==0.7.13 diff --git a/.constraints/py3.9.txt b/.constraints/py3.9.txt index 31df0068..3ba7a990 100644 --- a/.constraints/py3.9.txt +++ b/.constraints/py3.9.txt @@ -1,5 +1,5 @@ # This file was autogenerated by uv via the following command: -# uv pip compile pyproject.toml -o .constraints/py3.9.txt --all-extras --color=always --no-annotate --python-version=3.9 --no-emit-package setuptools +# uv pip compile pyproject.toml -o .constraints/py3.9.txt --all-extras --no-annotate --python-version=3.9 --no-emit-package setuptools absl-py==2.1.0 accessible-pygments==0.0.4 alabaster==0.7.16 From e1e4468f783e98cd60e1333359a8f9f42652992c Mon Sep 17 00:00:00 2001 From: GitHub Date: Sat, 6 Apr 2024 09:56:10 +0000 Subject: [PATCH 6/9] MAINT: update pip constraints and pre-commit --- .constraints/py3.12.txt | 95 +++++++++++++++++++++-------------------- 1 file changed, 48 insertions(+), 47 deletions(-) diff --git a/.constraints/py3.12.txt b/.constraints/py3.12.txt index 7b3a9b5d..1333880b 100644 --- a/.constraints/py3.12.txt +++ b/.constraints/py3.12.txt @@ -14,7 +14,7 @@ async-lru==2.0.4 attrs==23.2.0 babel==2.14.0 beautifulsoup4==4.12.3 -black==24.2.0 +black==24.3.0 bleach==6.1.0 cachetools==5.3.3 cattrs==23.2.3 @@ -27,8 +27,8 @@ click==8.1.7 cloudpickle==3.0.0 colorama==0.4.6 comm==0.2.2 -contourpy==1.2.0 -coverage==7.4.3 +contourpy==1.2.1 +coverage==7.4.4 cycler==0.12.1 debugpy==1.8.1 decorator==5.1.1 @@ -37,43 +37,43 @@ distlib==0.3.8 dm-tree==0.1.8 docstring-to-markdown==0.15 docutils==0.20.1 -execnet==2.0.2 +execnet==2.1.0 executing==2.0.1 fastjsonschema==2.19.1 -filelock==3.13.1 -flatbuffers==24.3.7 -fonttools==4.49.0 +filelock==3.13.3 +flatbuffers==24.3.25 +fonttools==4.51.0 fqdn==1.5.1 gast==0.5.4 gitdb==4.0.11 -gitpython==3.1.42 +gitpython==3.1.43 google-pasta==0.2.0 -graphviz==0.20.1 +graphviz==0.20.3 greenlet==3.0.3 grpcio==1.62.1 h11==0.14.0 h5py==3.10.0 hepunits==2.3.3 -httpcore==1.0.4 +httpcore==1.0.5 httpx==0.27.0 identify==2.5.35 idna==3.6 imagesize==1.4.1 iminuit==2.25.2 -importlib-metadata==7.0.2 +importlib-metadata==7.1.0 iniconfig==2.0.0 -ipykernel==6.29.3 +ipykernel==6.29.4 ipympl==0.9.3 -ipython==8.22.2 +ipython==8.23.0 ipython-genutils==0.2.0 ipywidgets==8.1.2 isoduration==20.11.0 isort==5.13.2 -jax==0.4.25 -jaxlib==0.4.25 +jax==0.4.26 +jaxlib==0.4.26 jedi==0.19.1 jinja2==3.1.3 -json5==0.9.22 +json5==0.9.24 jsonpointer==2.4 jsonschema==4.21.1 jsonschema-specifications==2023.12.1 @@ -82,29 +82,29 @@ jupyter-cache==1.0.0 jupyter-client==8.6.1 jupyter-console==6.6.3 jupyter-core==5.7.2 -jupyter-events==0.9.1 +jupyter-events==0.10.0 jupyter-lsp==2.2.4 jupyter-server==2.13.0 jupyter-server-mathjax==0.2.6 jupyter-server-terminals==0.5.3 -jupyterlab==4.1.4 +jupyterlab==4.1.5 jupyterlab-code-formatter==2.2.1 jupyterlab-git==0.50.0 jupyterlab-lsp==5.1.0 -jupyterlab-myst==2.3.1 +jupyterlab-myst==2.3.2 jupyterlab-pygments==0.3.0 jupyterlab-server==2.25.4 jupyterlab-widgets==3.0.10 -keras==3.0.5 +keras==3.1.1 kiwisolver==1.4.5 -libclang==16.0.6 +libclang==18.1.1 livereload==2.6.3 llvmlite==0.42.0 lsprotocol==2023.0.1 -markdown==3.5.2 +markdown==3.6 markdown-it-py==3.0.0 markupsafe==2.1.5 -matplotlib==3.8.3 +matplotlib==3.8.4 matplotlib-inline==0.1.6 mdit-py-plugins==0.4.0 mdurl==0.1.2 @@ -117,30 +117,31 @@ myst-nb==1.0.0 myst-parser==2.0.0 namex==0.0.7 nbclient==0.6.8 -nbconvert==7.16.2 +nbconvert==7.16.3 nbdime==4.0.1 -nbformat==5.10.2 +nbformat==5.10.4 nbmake==1.5.3 nest-asyncio==1.6.0 nodeenv==1.8.0 -notebook==7.1.1 +notebook==7.1.2 notebook-shim==0.2.4 -numba==0.59.0 +numba==0.59.1 numpy==1.26.4 opt-einsum==3.3.0 +optree==0.11.0 overrides==7.7.0 packaging==24.0 pandas==2.2.1 pandocfilters==1.5.1 -parso==0.8.3 +parso==0.8.4 particle==0.23.1 pathspec==0.12.1 pexpect==4.9.0 phasespace==1.9.0 -pillow==10.2.0 +pillow==10.3.0 platformdirs==4.2.0 pluggy==1.4.0 -pre-commit==3.6.2 +pre-commit==3.7.0 prometheus-client==0.20.0 prompt-toolkit==3.0.43 protobuf==4.25.3 @@ -148,23 +149,23 @@ psutil==5.9.8 ptyprocess==0.7.0 pure-eval==0.2.2 py-cpuinfo==9.0.0 -pyarrow==15.0.1 -pycparser==2.21 +pyarrow==15.0.2 +pycparser==2.22 pydata-sphinx-theme==0.15.2 pygments==2.17.2 pyparsing==3.1.2 pyproject-api==1.6.1 pytest==8.1.1 pytest-benchmark==4.0.0 -pytest-cov==4.1.0 -pytest-mock==3.12.0 +pytest-cov==5.0.0 +pytest-mock==3.14.0 pytest-xdist==3.5.0 python-constraint==1.3.1 python-dateutil==2.9.0.post0 python-json-logger==2.0.7 python-lsp-jsonrpc==1.1.2 python-lsp-ruff==2.2.0 -python-lsp-server==1.10.0 +python-lsp-server==1.11.0 pytoolconfig==1.3.1 pytz==2024.1 pyyaml==6.0.1 @@ -172,15 +173,15 @@ pyzmq==25.1.2 qrules==0.10.1 qtconsole==5.5.1 qtpy==2.4.1 -referencing==0.33.0 +referencing==0.34.0 requests==2.31.0 rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 rich==13.7.1 -rope==1.12.0 +rope==1.13.0 rpds-py==0.18.0 -ruff==0.3.2 -scipy==1.12.0 +ruff==0.3.5 +scipy==1.13.0 send2trash==1.8.2 six==1.16.0 smmap==5.0.1 @@ -204,7 +205,7 @@ sphinxcontrib-jsmath==1.0.1 sphinxcontrib-qthelp==1.0.7 sphinxcontrib-serializinghtml==1.1.10 sphobjinv==2.3.1 -sqlalchemy==2.0.28 +sqlalchemy==2.0.29 stack-data==0.6.3 sympy==1.12 tabulate==0.9.0 @@ -216,16 +217,16 @@ termcolor==2.4.0 terminado==0.18.1 tinycss2==1.2.1 tornado==6.4 -tox==4.14.1 +tox==4.14.2 tqdm==4.66.2 traitlets==5.14.2 types-protobuf==4.24.0.20240311 -types-python-dateutil==2.8.19.20240311 +types-python-dateutil==2.9.0.20240316 types-pyyaml==6.0.12.20240311 -types-requests==2.31.0.20240311 -types-tensorflow==2.15.0.20240311 +types-requests==2.31.0.20240406 +types-tensorflow==2.15.0.20240314 types-tqdm==4.66.0.20240106 -typing-extensions==4.10.0 +typing-extensions==4.11.0 tzdata==2024.1 ujson==5.9.0 uri-template==1.3.0 @@ -235,11 +236,11 @@ wcwidth==0.2.13 webcolors==1.13 webencodings==0.5.1 websocket-client==1.7.0 -werkzeug==3.0.1 +werkzeug==3.0.2 wheel==0.43.0 widgetsnbextension==4.0.10 wrapt==1.16.0 -zipp==3.17.0 +zipp==3.18.1 # The following packages were excluded from the output: # setuptools From 47549724228aff5c983c5fa2f82c36094280a781 Mon Sep 17 00:00:00 2001 From: GitHub Date: Mon, 24 Jun 2024 07:46:30 +0000 Subject: [PATCH 7/9] MAINT: update pip constraints and pre-commit --- .constraints/py3.12.txt | 211 ++++++++++++++++++++-------------------- 1 file changed, 107 insertions(+), 104 deletions(-) diff --git a/.constraints/py3.12.txt b/.constraints/py3.12.txt index 1333880b..41825a1e 100644 --- a/.constraints/py3.12.txt +++ b/.constraints/py3.12.txt @@ -1,10 +1,10 @@ # This file was autogenerated by uv via the following command: # uv pip compile pyproject.toml -o .constraints/py3.12.txt --all-extras --no-annotate --python-version=3.12 --no-emit-package setuptools absl-py==2.1.0 -accessible-pygments==0.0.4 +accessible-pygments==0.0.5 alabaster==0.7.16 -ampform==0.15.0 -anyio==4.3.0 +ampform==0.15.4 +anyio==4.4.0 argon2-cffi==23.1.0 argon2-cffi-bindings==21.2.0 arrow==1.3.0 @@ -12,13 +12,13 @@ asttokens==2.4.1 astunparse==1.6.3 async-lru==2.0.4 attrs==23.2.0 -babel==2.14.0 +babel==2.15.0 beautifulsoup4==4.12.3 -black==24.3.0 +black==24.4.2 bleach==6.1.0 cachetools==5.3.3 cattrs==23.2.3 -certifi==2024.2.2 +certifi==2024.6.2 cffi==1.16.0 cfgv==3.4.0 chardet==5.2.0 @@ -28,7 +28,7 @@ cloudpickle==3.0.0 colorama==0.4.6 comm==0.2.2 contourpy==1.2.1 -coverage==7.4.4 +coverage==7.5.4 cycler==0.12.1 debugpy==1.8.1 decorator==5.1.1 @@ -36,13 +36,13 @@ defusedxml==0.7.1 distlib==0.3.8 dm-tree==0.1.8 docstring-to-markdown==0.15 -docutils==0.20.1 -execnet==2.1.0 +docutils==0.21.2 +execnet==2.1.1 executing==2.0.1 -fastjsonschema==2.19.1 -filelock==3.13.3 +fastjsonschema==2.20.0 +filelock==3.15.4 flatbuffers==24.3.25 -fonttools==4.51.0 +fonttools==4.53.0 fqdn==1.5.1 gast==0.5.4 gitdb==4.0.11 @@ -50,152 +50,151 @@ gitpython==3.1.43 google-pasta==0.2.0 graphviz==0.20.3 greenlet==3.0.3 -grpcio==1.62.1 +grpcio==1.64.1 h11==0.14.0 -h5py==3.10.0 -hepunits==2.3.3 +h5py==3.11.0 +hepunits==2.3.4 httpcore==1.0.5 httpx==0.27.0 -identify==2.5.35 -idna==3.6 +identify==2.5.36 +idna==3.7 imagesize==1.4.1 -iminuit==2.25.2 -importlib-metadata==7.1.0 +iminuit==2.26.0 +importlib-metadata==7.2.1 iniconfig==2.0.0 ipykernel==6.29.4 -ipympl==0.9.3 -ipython==8.23.0 +ipympl==0.9.4 +ipython==8.25.0 ipython-genutils==0.2.0 -ipywidgets==8.1.2 +ipywidgets==8.1.3 isoduration==20.11.0 isort==5.13.2 -jax==0.4.26 -jaxlib==0.4.26 +jax==0.4.30 +jaxlib==0.4.30 jedi==0.19.1 -jinja2==3.1.3 -json5==0.9.24 -jsonpointer==2.4 -jsonschema==4.21.1 +jinja2==3.1.4 +json5==0.9.25 +jsonpointer==3.0.0 +jsonschema==4.22.0 jsonschema-specifications==2023.12.1 jupyter==1.0.0 jupyter-cache==1.0.0 -jupyter-client==8.6.1 +jupyter-client==8.6.2 jupyter-console==6.6.3 jupyter-core==5.7.2 jupyter-events==0.10.0 -jupyter-lsp==2.2.4 -jupyter-server==2.13.0 +jupyter-lsp==2.2.5 +jupyter-server==2.14.1 jupyter-server-mathjax==0.2.6 jupyter-server-terminals==0.5.3 -jupyterlab==4.1.5 +jupyterlab==4.2.2 jupyterlab-code-formatter==2.2.1 -jupyterlab-git==0.50.0 +jupyterlab-git==0.50.1 jupyterlab-lsp==5.1.0 -jupyterlab-myst==2.3.2 +jupyterlab-myst==2.4.2 jupyterlab-pygments==0.3.0 -jupyterlab-server==2.25.4 -jupyterlab-widgets==3.0.10 -keras==3.1.1 +jupyterlab-server==2.27.2 +jupyterlab-widgets==3.0.11 +keras==3.3.3 kiwisolver==1.4.5 libclang==18.1.1 -livereload==2.6.3 -llvmlite==0.42.0 +llvmlite==0.43.0 lsprotocol==2023.0.1 markdown==3.6 markdown-it-py==3.0.0 markupsafe==2.1.5 -matplotlib==3.8.4 -matplotlib-inline==0.1.6 -mdit-py-plugins==0.4.0 +matplotlib==3.9.0 +matplotlib-inline==0.1.7 +mdit-py-plugins==0.4.1 mdurl==0.1.2 mistune==3.0.2 ml-dtypes==0.3.2 mpmath==1.3.0 -mypy==1.9.0 +mypy==1.10.0 mypy-extensions==1.0.0 -myst-nb==1.0.0 -myst-parser==2.0.0 -namex==0.0.7 +myst-nb==1.1.0 +myst-parser==3.0.1 +namex==0.0.8 nbclient==0.6.8 -nbconvert==7.16.3 +nbconvert==7.16.4 nbdime==4.0.1 nbformat==5.10.4 -nbmake==1.5.3 +nbmake==1.5.4 nest-asyncio==1.6.0 -nodeenv==1.8.0 -notebook==7.1.2 +nodeenv==1.9.1 +notebook==7.2.1 notebook-shim==0.2.4 -numba==0.59.1 +numba==0.60.0 numpy==1.26.4 opt-einsum==3.3.0 optree==0.11.0 overrides==7.7.0 -packaging==24.0 -pandas==2.2.1 +packaging==24.1 +pandas==2.2.2 pandocfilters==1.5.1 parso==0.8.4 -particle==0.23.1 +particle==0.24.0 pathspec==0.12.1 pexpect==4.9.0 -phasespace==1.9.0 +phasespace==1.10.3 pillow==10.3.0 -platformdirs==4.2.0 -pluggy==1.4.0 -pre-commit==3.7.0 +platformdirs==4.2.2 +pluggy==1.5.0 +pre-commit==3.7.1 prometheus-client==0.20.0 -prompt-toolkit==3.0.43 +prompt-toolkit==3.0.47 protobuf==4.25.3 -psutil==5.9.8 +psutil==6.0.0 ptyprocess==0.7.0 pure-eval==0.2.2 py-cpuinfo==9.0.0 -pyarrow==15.0.2 +pyarrow==16.1.0 pycparser==2.22 -pydata-sphinx-theme==0.15.2 -pygments==2.17.2 +pydata-sphinx-theme==0.15.3 +pygments==2.18.0 pyparsing==3.1.2 -pyproject-api==1.6.1 -pytest==8.1.1 +pyproject-api==1.7.1 +pytest==8.2.2 pytest-benchmark==4.0.0 pytest-cov==5.0.0 pytest-mock==3.14.0 -pytest-xdist==3.5.0 -python-constraint==1.3.1 +pytest-xdist==3.6.1 +python-constraint2==2.0.0b5 python-dateutil==2.9.0.post0 python-json-logger==2.0.7 python-lsp-jsonrpc==1.1.2 -python-lsp-ruff==2.2.0 +python-lsp-ruff==2.2.1 python-lsp-server==1.11.0 pytoolconfig==1.3.1 pytz==2024.1 pyyaml==6.0.1 -pyzmq==25.1.2 -qrules==0.10.1 -qtconsole==5.5.1 +pyzmq==26.0.3 +qrules==0.10.2 +qtconsole==5.5.2 qtpy==2.4.1 -referencing==0.34.0 -requests==2.31.0 +referencing==0.35.1 +requests==2.32.3 rfc3339-validator==0.1.4 rfc3986-validator==0.1.1 rich==13.7.1 rope==1.13.0 -rpds-py==0.18.0 -ruff==0.3.5 -scipy==1.13.0 -send2trash==1.8.2 +rpds-py==0.18.1 +ruff==0.4.10 +scipy==1.13.1 +send2trash==1.8.3 six==1.16.0 smmap==5.0.1 sniffio==1.3.1 snowballstemmer==2.2.0 soupsieve==2.5 -sphinx==7.2.6 -sphinx-api-relink==0.0.8 -sphinx-autobuild==2024.2.4 -sphinx-book-theme==1.1.2 -sphinx-codeautolink==0.15.0 +sphinx==7.3.7 +sphinx-api-relink==0.0.9 +sphinx-autobuild==2024.4.16 +sphinx-book-theme==1.1.3 +sphinx-codeautolink==0.15.2 sphinx-comments==0.0.3 sphinx-copybutton==0.5.2 -sphinx-design==0.5.0 +sphinx-design==0.6.0 sphinx-thebe==0.3.1 sphinx-togglebutton==0.3.2 sphinxcontrib-applehelp==1.0.8 @@ -204,10 +203,11 @@ sphinxcontrib-htmlhelp==2.0.5 sphinxcontrib-jsmath==1.0.1 sphinxcontrib-qthelp==1.0.7 sphinxcontrib-serializinghtml==1.1.10 -sphobjinv==2.3.1 -sqlalchemy==2.0.29 +sphobjinv==2.3.1.1 +sqlalchemy==2.0.31 stack-data==0.6.3 -sympy==1.12 +starlette==0.37.2 +sympy==1.12.1 tabulate==0.9.0 tensorboard==2.16.2 tensorboard-data-server==0.7.2 @@ -215,32 +215,35 @@ tensorflow==2.16.1 tensorflow-probability==0.24.0 termcolor==2.4.0 terminado==0.18.1 -tinycss2==1.2.1 -tornado==6.4 -tox==4.14.2 -tqdm==4.66.2 -traitlets==5.14.2 -types-protobuf==4.24.0.20240311 +tinycss2==1.3.0 +tornado==6.4.1 +tox==4.15.1 +tqdm==4.66.4 +traitlets==5.14.3 +types-protobuf==5.26.0.20240422 types-python-dateutil==2.9.0.20240316 types-pyyaml==6.0.12.20240311 -types-requests==2.31.0.20240406 -types-tensorflow==2.15.0.20240314 -types-tqdm==4.66.0.20240106 -typing-extensions==4.11.0 +types-requests==2.32.0.20240622 +types-tensorflow==2.16.0.20240618 +types-tqdm==4.66.0.20240417 +typing-extensions==4.12.2 tzdata==2024.1 -ujson==5.9.0 +ujson==5.10.0 uri-template==1.3.0 -urllib3==2.2.1 -virtualenv==20.25.1 +urllib3==2.2.2 +uvicorn==0.30.1 +virtualenv==20.26.3 +watchfiles==0.22.0 wcwidth==0.2.13 -webcolors==1.13 +webcolors==24.6.0 webencodings==0.5.1 -websocket-client==1.7.0 -werkzeug==3.0.2 +websocket-client==1.8.0 +websockets==12.0 +werkzeug==3.0.3 wheel==0.43.0 -widgetsnbextension==4.0.10 +widgetsnbextension==4.0.11 wrapt==1.16.0 -zipp==3.18.1 +zipp==3.19.2 # The following packages were excluded from the output: # setuptools From 01f6612e915b7ee89adcc2f6d83b52d8a16e5b5f Mon Sep 17 00:00:00 2001 From: Remco de Boer <29308176+redeboer@users.noreply.github.com> Date: Mon, 24 Jun 2024 09:54:55 +0200 Subject: [PATCH 8/9] MAINT: ignore `google._upb._message.MessageMapContainer` deprecation warning --- pyproject.toml | 1 + 1 file changed, 1 insertion(+) diff --git a/pyproject.toml b/pyproject.toml index e453534d..50c3b6ee 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -265,6 +265,7 @@ filterwarnings = [ "error", "ignore: `np.bool8` is a deprecated alias for `np.bool_`.*:DeprecationWarning", "ignore:.* is deprecated and will be removed in Pillow 10.*:DeprecationWarning", + "ignore:.*Type google\\._upb\\._message\\.MessageMapContainer uses PyType_Spec with a metaclass that has custom tp_new:DeprecationWarning", "ignore:.*Using or importing the ABCs.*:DeprecationWarning", "ignore:.*the imp module is deprecated in favour of importlib.*:DeprecationWarning", "ignore:Passing a schema to Validator.iter_errors is deprecated.*:DeprecationWarning", From 72679346102df23e32bd4d4d628e7c61a3140e24 Mon Sep 17 00:00:00 2001 From: Remco de Boer <29308176+redeboer@users.noreply.github.com> Date: Mon, 24 Jun 2024 10:03:00 +0200 Subject: [PATCH 9/9] MAINT: generalize deprecation warning regex match --- pyproject.toml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pyproject.toml b/pyproject.toml index 50c3b6ee..9366af7b 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -265,7 +265,7 @@ filterwarnings = [ "error", "ignore: `np.bool8` is a deprecated alias for `np.bool_`.*:DeprecationWarning", "ignore:.* is deprecated and will be removed in Pillow 10.*:DeprecationWarning", - "ignore:.*Type google\\._upb\\._message\\.MessageMapContainer uses PyType_Spec with a metaclass that has custom tp_new:DeprecationWarning", + "ignore:.*Type google\\._upb\\..*This is deprecated.*", "ignore:.*Using or importing the ABCs.*:DeprecationWarning", "ignore:.*the imp module is deprecated in favour of importlib.*:DeprecationWarning", "ignore:Passing a schema to Validator.iter_errors is deprecated.*:DeprecationWarning",