mineral_system.yml

version: 2
resources: json
preprocessing:
  - type: pmap
    path: ["MineralSystem", ..]
    code: |
      from slugify import slugify
      import hashlib

      # copy & modify Namrata's code a bit
      def process_mineral_system(ms):
        merged_string = []
        fields = ['source', 'pathway', 'trap', 'preservation', 'energy', 'outflow']
        for f in fields:
          if f in ms:
              f_object = ms[f]
              for item in f_object:
                  merged_string.append(slugify(item.get('theoretical','')))
                  merged_string.append(slugify(item.get('criteria','')))                  
        if 'deposit_type' in ms:
          for dt in ms['deposit_type']:
            merged_string.append(slugify(dt))
        merged_string = '__'.join(merged_string)
        assert len(merged_string) > 0
        if len(merged_string) > 120:
          merged_string = merged_string[:120] + hashlib.sha256(merged_string.encode()).hexdigest()[:16]
        return 'sys__' + merged_string

      def process_document(data):
        merged_string = ''
        if 'doi' in data:
          merged_string = merged_string + slugify(data['doi'])
          merged_string += '-'
        elif 'uri' in data:
          merged_string = merged_string + slugify(data['uri'])
          merged_string += '-'
        else:
          merged_string = merged_string+ slugify(data.get('title', ''))
          merged_string += '-'
          merged_string = merged_string+ slugify(str(data.get('year', '')))
          merged_string += '-'
          merged_string = merged_string+ slugify(str(data.get('authors', '')))
          merged_string += '-'
          merged_string = merged_string+ slugify(str(data.get('month', '')))
          merged_string += '-'

        assert len(merged_string) > 0
        if len(merged_string) > 120:
          merged_string = merged_string[:120] + hashlib.sha256(merged_string.encode()).hexdigest()[:16]
        return 'doc__' + merged_string

      mndr_url = "https://minmod.isi.edu/resource/"
      value["id"] = mndr_url + process_mineral_system(value)

      fields = ["source", "pathway", "trap", "preservation", "energy", "outflow"]
      for f in fields:
        if f in value:
          for f_object in value[f]:
            if "supporting_references" in f_object:
              for reference in f_object["supporting_references"]:
                if "document" in reference:
                  document = reference["document"]
                  doc_data = {"document": document}
                  document["id"] = mndr_url + process_document(doc_data)
      return value
attributes:
  ms_id: ["MineralSystem", .., "id"]
  deposit_type:
    path: ["MineralSystem", .., "deposit_type", ..]
  source_criteria:
    path: ["MineralSystem", .., "source", .., "criteria"]
  source_theoretical:
    path: ["MineralSystem", .., "source", .., ["theoretical"]]
  source_potential_dataset_name:
    path: ["MineralSystem", .., "source", .., ["potential_dataset"], .., "name"]
  source_potential_dataset_score:
    path: ["MineralSystem", .., "source", .., ["potential_dataset"], .., "relevance_score"]
  source_id_reference:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., "id"]
  source_issue_document:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["document"], ["issue"]]
  source_id_document:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["document"], "id"]
  source_uri_document:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["document"], ["uri"]]
  source_doi:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["document"], ["doi"]]
  source_volume:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["document"], ["volume"]]
  source_year_document:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["document"], ["year"]]
  source_month_document:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["document"], ["month"]]
  source_authors:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["document"], ["authors"]]
    value_type: list[str]
  source_journal:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["document"], ["journal"]]
  source_description_document:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["document"], ["description"]]
  source_title_document:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["document"], ["title"]]
  source_page:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["page_info"], .., ["page"]]
  source_bounding_box:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"]]
  source_x_min:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["x_min"]]
  source_x_max:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["x_max"]]
  source_y_min:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["y_min"]]
  source_y_max:
    path: ["MineralSystem", .., "source", .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["y_max"]]

  pathway_criteria:
    path: ["MineralSystem", .., "pathway", .., "criteria"]
  pathway_theoretical:
    path: ["MineralSystem", .., "pathway", .., ["theoretical"]]
  pathway_potential_dataset_name:
    path: ["MineralSystem", .., "pathway", .., ["potential_dataset"], .., "name"]
  pathway_potential_dataset_score:
    path: ["MineralSystem", .., "pathway", .., ["potential_dataset"], .., "relevance_score"]
  pathway_id_reference:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., "id"]
  pathway_issue_document:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["document"], ["issue"]]
  pathway_id_document:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["document"], "id"]
  pathway_uri_document:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["document"], ["uri"]]
  pathway_doi:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["document"], ["doi"]]
  pathway_volume:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["document"], ["volume"]]
  pathway_year_document:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["document"], ["year"]]
  pathway_month_document:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["document"], ["month"]]
  pathway_authors:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["document"], ["authors"]]
    value_type: list[str]
  pathway_journal:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["document"], ["journal"]]
  pathway_description_document:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["document"], ["description"]]
  pathway_title_document:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["document"], ["title"]]
  pathway_page:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["page_info"], .., ["page"]]
  pathway_bounding_box:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"]]
  pathway_x_min:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["x_min"]]
  pathway_x_max:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["x_max"]]
  pathway_y_min:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["y_min"]]
  pathway_y_max:
    path: ["MineralSystem", .., "pathway", .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["y_max"]]

  trap_criteria:
    path: ["MineralSystem", .., ["trap"], .., "criteria"]
  trap_theoretical:
    path: ["MineralSystem", .., ["trap"], .., ["theoretical"]]
  trap_potential_dataset_name:
    path: ["MineralSystem", .., ["trap"], .., ["potential_dataset"], .., "name"]
  trap_potential_dataset_score:
    path: ["MineralSystem", .., ["trap"], .., ["potential_dataset"], .., "relevance_score"]
  trap_id_reference:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["id"]]
  trap_issue_document:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["document"], ["issue"]]
  trap_id_document:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["document"], "id"]
  trap_uri_document:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["document"], ["uri"]]
  trap_doi:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["document"], ["doi"]]
  trap_volume:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["document"], ["volume"]]
  trap_year_document:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["document"], ["year"]]
  trap_month_document:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["document"], ["month"]]
  trap_authors:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["document"], ["authors"]]
    value_type: list[str]
  trap_journal:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["document"], ["journal"]]
  trap_description_document:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["document"], ["description"]]
  trap_title_document:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["document"], ["title"]]
  trap_page:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["page_info"], .., ["page"]]
  trap_bounding_box:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"]]
  trap_x_min:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["x_min"]]
  trap_x_max:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["x_max"]]
  trap_y_min:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["y_min"]]
  trap_y_max:
    path: ["MineralSystem", .., ["trap"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["y_max"]]

  preservation_criteria:
    path: ["MineralSystem", .., ["preservation"], .., "criteria"]
  preservation_theoretical:
    path: ["MineralSystem", .., ["preservation"], .., ["theoretical"]]
  preservation_potential_dataset_name:
    path: ["MineralSystem", .., ["preservation"], .., ["potential_dataset"], .., "name"]
  preservation_potential_dataset_score:
    path: ["MineralSystem", .., ["preservation"], .., ["potential_dataset"], .., "relevance_score"]
  preservation_id_reference:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["id"]]
  preservation_issue_document:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["document"], ["issue"]]
  preservation_id_document:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["document"], "id"]
  preservation_uri_document:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["document"], ["uri"]]
  preservation_doi:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["document"], ["doi"]]
  preservation_volume:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["document"], ["volume"]]
  preservation_year_document:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["document"], ["year"]]
  preservation_month_document:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["document"], ["month"]]
  preservation_authors:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["document"], ["authors"]]
    value_type: list[str]
  preservation_journal:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["document"], ["journal"]]
  preservation_description_document:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["document"], ["description"]]
  preservation_title_document:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["document"], ["title"]]
  preservation_page:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["page_info"], .., ["page"]]
  preservation_bounding_box:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"]]
  preservation_x_min:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["x_min"]]
  preservation_x_max:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["x_max"]]
  preservation_y_min:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["y_min"]]
  preservation_y_max:
    path: ["MineralSystem", .., ["preservation"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["y_max"]]

  energy_criteria:
    path: ["MineralSystem", .., ["energy"], .., "criteria"]
  energy_theoretical:
    path: ["MineralSystem", .., ["energy"], .., ["theoretical"]]
  energy_potential_dataset_name:
    path: ["MineralSystem", .., ["energy"], .., ["potential_dataset"], .., "name"]
  energy_potential_dataset_score:
    path: ["MineralSystem", .., ["energy"], .., ["potential_dataset"], .., "relevance_score"]
  energy_id_reference:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["id"]]
  energy_issue_document:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["document"], ["issue"]]
  energy_id_document:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["document"], "id"]
  energy_uri_document:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["document"], ["uri"]]
  energy_doi:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["document"], ["doi"]]
  energy_volume:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["document"], ["volume"]]
  energy_year_document:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["document"], ["year"]]
  energy_month_document:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["document"], ["month"]]
  energy_authors:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["document"], ["authors"]]
    value_type: list[str]
  energy_journal:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["document"], ["journal"]]
  energy_description_document:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["document"], ["description"]]
  energy_title_document:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["document"], ["title"]]
  energy_page:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["page_info"], .., ["page"]]
  energy_bounding_box:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"]]
  energy_x_min:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["x_min"]]
  energy_x_max:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["x_max"]]
  energy_y_min:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["y_min"]]
  energy_y_max:
    path: ["MineralSystem", .., ["energy"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["y_max"]]

  outflow_criteria:
    path: ["MineralSystem", .., ["outflow"], .., "criteria"]
  outflow_theoretical:
    path: ["MineralSystem", .., ["outflow"], .., ["theoretical"]]
  outflow_potential_dataset_name:
    path: ["MineralSystem", .., ["outflow"], .., ["potential_dataset"], .., "name"]
  outflow_potential_dataset_score:
    path: ["MineralSystem", .., ["outflow"], .., ["potential_dataset"], .., "relevance_score"]
  outflow_id_reference:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["id"]]
  outflow_issue_document:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["document"], ["issue"]]
  outflow_id_document:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["document"], "id"]
  outflow_uri_document:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["document"], ["uri"]]
  outflow_doi:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["document"], ["doi"]]
  outflow_volume:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["document"], ["volume"]]
  outflow_year_document:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["document"], ["year"]]
  outflow_month_document:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["document"], ["month"]]
  outflow_authors:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["document"], ["authors"]]
    value_type: list[str]
  outflow_journal:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["document"], ["journal"]]
  outflow_description_document:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["document"], ["description"]]
  outflow_title_document:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["document"], ["title"]]
  outflow_page:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["page_info"], .., ["page"]]
  outflow_bounding_box:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"]]
  outflow_x_min:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["x_min"]]
  outflow_x_max:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["x_max"]]
  outflow_y_min:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["y_min"]]
  outflow_y_max:
    path: ["MineralSystem", .., ["outflow"], .., ["supporting_references"], .., ["page_info"], .., ["bounding_box"], ["y_max"]]

alignments:
  - type: auto

semantic_model:
  mno:MineralSystem:1:
    properties:
      - [drepr:uri, ms_id]
      - [mno:id, ms_id]
      - [mno:deposit_type, deposit_type, drepr:uri]
    links:
      - [mno:pathway, mno:MappableCriteria:2]
      - [mno:trap, mno:MappableCriteria:3]
      - [mno:source, mno:MappableCriteria:1]
      - [mno:prservation, mno:MappableCriteria:4]
      - [mno:outflow, mno:MappableCriteria:6]
      - [mno:energy, mno:MappableCriteria:5]
    subject: ms_id

  mno:MappableCriteria:2:
    properties:
      - [mno:criteria, pathway_criteria]
      - [mno:theoretical, pathway_theoretical]
    links:
      - [mno:potential_dataset, mno:EvidenceLayer:2]
      - [mno:supporting_references, mno:Reference:2]
    subject: pathway_criteria

  mno:EvidenceLayer:2:
    properties:
      - [mno:name, pathway_potential_dataset_name]
      - [mno:evidence_score, pathway_potential_dataset_score]

  mno:Reference:2:
    properties:
      - [mno:document_id, pathway_id_document]
    links:
      - [mno:document, mno:Document:2]
      - [mno:page_info, mno:PageInfo:2]

  mno:PageInfo:2:
    properties:
      - [mno:page, pathway_page]
    links:
      - [mno:bounding_box, mno:BoundingBox:2]

  mno:BoundingBox:2:
    properties:
      - [mno:x_min, pathway_x_min]
      - [mno:x_max, pathway_x_max]
      - [mno:y_min, pathway_y_min]
      - [mno:y_max, pathway_y_max]
    links: []
    subject: pathway_x_min

  mno:Document:2:
    properties:
      - [drepr:uri, pathway_id_document]
      - [mno:id, pathway_id_document]
      - [mno:uri, pathway_uri_document]
      - [mno:doi, pathway_doi]
      - [mno:journal, pathway_journal]
      - [mno:authors, pathway_authors]
      - [mno:description, pathway_description_document]
      - [mno:title, pathway_title_document]
      - [mno:volume, pathway_volume]
      - [mno:issue, pathway_issue_document]
      - [mno:month, pathway_month_document]
      - [mno:year, pathway_year_document]
    subject: pathway_id_document

  mno:MappableCriteria:3:
    properties:
      - [mno:criteria, trap_criteria]
      - [mno:theoretical, trap_theoretical]
    subject: trap_criteria
    links:
      - [mno:potential_dataset, mno:EvidenceLayer:3]
      - [mno:supporting_references, mno:Reference:3]

  mno:EvidenceLayer:3:
    properties:
      - [mno:name, trap_potential_dataset_name]
      - [mno:evidence_score, trap_potential_dataset_score]

  mno:Reference:3:
    properties:
      - [mno:document_id, trap_id_document]
    links:
      - [mno:document, mno:Document:3]
      - [mno:page_info, mno:PageInfo:3]

  mno:PageInfo:3:
    properties:
      - [mno:page, trap_page]
    links:
      - [mno:bounding_box, mno:BoundingBox:3]

  mno:BoundingBox:3:
    properties:
      - [mno:x_min, trap_x_min]
      - [mno:x_max, trap_x_max]
      - [mno:y_min, trap_y_min]
      - [mno:y_max, trap_y_max]
    subject: trap_x_min
    links: []

  mno:Document:3:
    properties:
      - [drepr:uri, trap_id_document]
      - [mno:id, trap_id_document]
      - [mno:uri, trap_uri_document]
      - [mno:doi, trap_doi]
      - [mno:journal, trap_journal]
      - [mno:authors, trap_authors]
      - [mno:description, trap_description_document]
      - [mno:title, trap_title_document]
      - [mno:volume, trap_volume]
      - [mno:issue, trap_issue_document]
      - [mno:month, trap_month_document]
      - [mno:year, trap_year_document]
    subject: trap_id_document

  mno:MappableCriteria:1:
    properties:
      - [mno:criteria, source_criteria]
      - [mno:theoretical, source_theoretical]
    links:
      - [mno:potential_dataset, mno:EvidenceLayer:1]
      - [mno:supporting_references, mno:Reference:1]
    subject: source_criteria

  mno:EvidenceLayer:1:
    properties:
      - [mno:name, source_potential_dataset_name]
      - [mno:evidence_score, source_potential_dataset_score]

  mno:Reference:1:
    properties:
      - [mno:document_id, source_id_document]
    links:
      - [mno:document, mno:Document:1]
      - [mno:page_info, mno:PageInfo:1]

  mno:PageInfo:1:
    properties:
      - [mno:page, source_page]
    links:
      - [mno:bounding_box, mno:BoundingBox:1]

  mno:BoundingBox:1:
    properties:
      - [mno:x_min, source_x_min]
      - [mno:x_max, source_x_max]
      - [mno:y_min, source_y_min]
      - [mno:y_max, source_y_max]
    links: []
    subject: source_x_min

  mno:Document:1:
    properties:
      - [drepr:uri, source_id_document]
      - [mno:id, source_id_document]
      - [mno:uri, source_uri_document]
      - [mno:doi, source_doi]
      - [mno:journal, source_journal]
      - [mno:authors, source_authors]
      - [mno:description, source_description_document]
      - [mno:title, source_title_document]
      - [mno:volume, source_volume]
      - [mno:issue, source_issue_document]
      - [mno:month, source_month_document]
      - [mno:year, source_year_document]
    subject: source_id_document

  mno:MappableCriteria:4:
    properties:
      - [mno:criteria, preservation_criteria]
      - [mno:theoretical, preservation_theoretical]
    subject: preservation_criteria
    links:
      - [mno:potential_dataset, mno:EvidenceLayer:4]
      - [mno:supporting_references, mno:Reference:4]

  mno:EvidenceLayer:4:
    properties:
      - [mno:name, preservation_potential_dataset_name]
      - [mno:evidence_score, preservation_potential_dataset_score]

  mno:Reference:4:
    properties:
      - [mno:document_id, preservation_id_document]
    links:
      - [mno:document, mno:Document:4]
      - [mno:page_info, mno:PageInfo:4]

  mno:PageInfo:4:
    properties:
      - [mno:page, preservation_page]
    links:
      - [mno:bounding_box, mno:BoundingBox:4]

  mno:BoundingBox:4:
    properties:
      - [mno:x_min, preservation_x_min]
      - [mno:x_max, preservation_x_max]
      - [mno:y_min, preservation_y_min]
      - [mno:y_max, preservation_y_max]
    subject: preservation_x_min
    links: []

  mno:Document:4:
    properties:
      - [drepr:uri, preservation_id_document]
      - [mno:id, preservation_id_document]
      - [mno:uri, preservation_uri_document]
      - [mno:doi, preservation_doi]
      - [mno:journal, preservation_journal]
      - [mno:authors, preservation_authors]
      - [mno:description, preservation_description_document]
      - [mno:title, preservation_title_document]
      - [mno:volume, preservation_volume]
      - [mno:issue, preservation_issue_document]
      - [mno:month, preservation_month_document]
      - [mno:year, preservation_year_document]
    subject: preservation_id_document

  mno:MappableCriteria:5:
    properties:
      - [mno:criteria, energy_criteria]
      - [mno:theoretical, energy_theoretical]
    subject: energy_criteria
    links:
      - [mno:potential_dataset, mno:EvidenceLayer:5]
      - [mno:supporting_references, mno:Reference:5]

  mno:EvidenceLayer:5:
    properties:
      - [mno:name, energy_potential_dataset_name]
      - [mno:evidence_score, energy_potential_dataset_score]

  mno:Reference:5:
    properties:
      - [mno:document_id, energy_id_document]
    links:
      - [mno:document, mno:Document:5]
      - [mno:page_info, mno:PageInfo:5]

  mno:PageInfo:5:
    properties:
      - [mno:page, energy_page]
    links:
      - [mno:bounding_box, mno:BoundingBox:5]

  mno:BoundingBox:5:
    properties:
      - [mno:x_min, energy_x_min]
      - [mno:x_max, energy_x_max]
      - [mno:y_min, energy_y_min]
      - [mno:y_max, energy_y_max]
    subject: energy_x_min
    links: []

  mno:Document:5:
    properties:
      - [drepr:uri, energy_id_document]
      - [mno:id, energy_id_document]
      - [mno:uri, energy_uri_document]
      - [mno:doi, energy_doi]
      - [mno:journal, energy_journal]
      - [mno:authors, energy_authors]
      - [mno:description, energy_description_document]
      - [mno:title, energy_title_document]
      - [mno:volume, energy_volume]
      - [mno:issue, energy_issue_document]
      - [mno:month, energy_month_document]
      - [mno:year, energy_year_document]
    subject: energy_id_document

  mno:MappableCriteria:6:
    properties:
      - [mno:criteria, outflow_criteria]
      - [mno:theoretical, outflow_theoretical]
    subject: outflow_criteria
    links:
      - [mno:potential_dataset, mno:EvidenceLayer:6]
      - [mno:supporting_references, mno:Reference:6]

  mno:EvidenceLayer:6:
    properties:
      - [mno:name, outflow_potential_dataset_name]
      - [mno:evidence_score, outflow_potential_dataset_score]

  mno:Reference:6:
    properties:
      - [mno:document_id, outflow_id_document]
    links:
      - [mno:document, mno:Document:6]
      - [mno:page_info, mno:PageInfo:6]

  mno:PageInfo:6:
    properties:
      - [mno:page, outflow_page]
    links:
      - [mno:bounding_box, mno:BoundingBox:6]

  mno:BoundingBox:6:
    properties:
      - [mno:x_min, outflow_x_min]
      - [mno:x_max, outflow_x_max]
      - [mno:y_min, outflow_y_min]
      - [mno:y_max, outflow_y_max]
    subject: outflow_x_min
    links: []

  mno:Document:6:
    properties:
      - [drepr:uri, outflow_id_document]
      - [mno:id, outflow_id_document]
      - [mno:uri, outflow_uri_document]
      - [mno:doi, outflow_doi]
      - [mno:journal, outflow_journal]
      - [mno:authors, outflow_authors]
      - [mno:description, outflow_description_document]
      - [mno:title, outflow_title_document]
      - [mno:volume, outflow_volume]
      - [mno:issue, outflow_issue_document]
      - [mno:month, outflow_month_document]
      - [mno:year, outflow_year_document]
    subject: outflow_id_document
  prefixes:
    mnr: https://minmod.isi.edu/resource/
    mno: https://minmod.isi.edu/ontology/
    rdf: http://www.w3.org/1999/02/22-rdf-syntax-ns#
    rdfs: http://www.w3.org/2000/01/rdf-schema#
    xsd: http://www.w3.org/2001/XMLSchema#
    owl: http://www.w3.org/2002/07/owl#
    drepr: https://purl.org/drepr/1.0/
    geo: http://www.opengis.net/ont/geosparql#