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cyto_plot_gating_scheme fails when OR gates are contained in the gating template #222

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danychauvin opened this issue Nov 13, 2024 · 0 comments
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@danychauvin
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Describe the bug
When trying to use cyto_plot_gating_scheme on my data, using a gating template containing a OR gate, nothing is plotted, and I get the following message:

Only NOT boolean gates are supported.
Error in FUN(X[[i]], ...) : NA does not exist in this GatingHierarchy!

To Reproduce
Steps to reproduce the behavior:
Apply a gating template to your dataset, with an OR gate. Try to run cyto_plot_gating_scheme.

Expected behavior
It should plot all gates that are not OR gates.

Desktop (please complete the following information):

  • Linux
  • R 4.3.0
  • cytoexploreR 1.1.0

Let me know if you need more info. Thank you for all the work. This package is fantastic work!

Best,
Dany

@danychauvin danychauvin added the Bug Something isn't working label Nov 13, 2024
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