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cannot install on R version 4.4.2 #223

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schvartzman opened this issue Dec 9, 2024 · 0 comments
Open

cannot install on R version 4.4.2 #223

schvartzman opened this issue Dec 9, 2024 · 0 comments
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Bug Something isn't working

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@schvartzman
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Describe the bug
I am getting the follow error when trying to install CytoExploreRData and CytoExploreR

To Reproduce
`> # CytoExploreRData

devtools::install_github("DillonHammill/CytoExploreRData")
Downloading GitHub repo DillonHammill/CytoExploreRData@HEAD
── R CMD build ────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
✔ checking for file ‘/private/var/folders/yx/y6blb_2120zf1w8ty97x0r180000gr/T/Rtmp9gSu3d/remotes105b35034bfc/DillonHammill-CytoExploreRData-488edf0/DESCRIPTION’ ...
─ preparing ‘CytoExploreRData’: (426ms)
✔ checking DESCRIPTION meta-information
Error: invalid version specification ‘’
Execution halted
Error: Failed to install 'CytoExploreRData' from GitHub:
! System command 'R' failed

CytoExploreR

devtools::install_github("DillonHammill/CytoExploreR")
Downloading GitHub repo DillonHammill/CytoExploreR@HEAD
Skipping 22 packages ahead of CRAN: Rhdf5lib, RProtoBufLib, S4Vectors, cytolib, BiocGenerics, Biobase, graph, flowCore, XVector, zlibbioc, SparseArray, S4Arrays, IRanges, MatrixGenerics, DelayedArray, ncdfFlow, Rgraphviz, RBGL, flowClust, flowWorkspace, flowViz, openCyto
── R CMD build ────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
✔ checking for file ‘/private/var/folders/yx/y6blb_2120zf1w8ty97x0r180000gr/T/Rtmp9gSu3d/remotes105b4e3997e8/DillonHammill-CytoExploreR-0efb1cc/DESCRIPTION’ ...
─ preparing ‘CytoExploreR’: (614ms)
✔ checking DESCRIPTION meta-information
Error: invalid version specification ‘’
Execution halted
Error: Failed to install 'CytoExploreR' from GitHub:
! System command 'R' failed`

Desktop (please complete the following information):
Using MacOS 15.1.1 and RStudio 2024.09.1+394

Also any updates on future version updates?

Thanks!

Juanma Schvartzman
Columbia University

@schvartzman schvartzman added the Bug Something isn't working label Dec 9, 2024
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