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Update heatcluster.yml
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DrB-S authored Oct 20, 2023
1 parent 35bbb91 commit d79dde9
Showing 1 changed file with 10 additions and 10 deletions.
20 changes: 10 additions & 10 deletions .github/workflows/heatcluster.yml
Original file line number Diff line number Diff line change
Expand Up @@ -8,33 +8,33 @@ jobs:
uses: actions/checkout@v3

- name: install dependencies
run: pip install pandas numpy scipy fastcluster scikit-learn seaborn matplotlib
run: pip install argparse logging pandas numpy pathlib seaborn matplotlib

- name: test
- name: test (tab-delimited)
run: python3 HeatCluster.py -i test/snp_matrix.txt

- name: test1
- name: test1 (comma-delimited)
run: ./HeatCluster.py -i test/snp-dists.txt -o test1

- name: test2
- name: test2 (blank - failure)
run: ./HeatCluster.py -i test/blank.txt -o test2 -t png

- name: test3
- name: test3 (melted - failure)
run: ./HeatCluster.py -i test/melted.txt -o test3

- name: test4
- name: test4 (small matrix)
run: ./HeatCluster.py -i test/small_matrix.csv -o test4

- name: test5
- name: test5 (medium matrix)
run: ./HeatCluster.py -i test/med_matrix.txt -o test5

- name: test6
- name: test6 (large matrix)
run: ./HeatCluster.py -i test/large_matrix.csv -o test6

- name: test7
- name: test7 (help)
run: ./HeatCluster.py -h

- name: test7
- name: test7 (version)
run: ./HeatCluster.py -v

- name: tree
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