pyproject.toml

[tool.poetry]
name = "mtblsws-py"
version = "2.2.0"
description = ""
authors = ["MetaboLights Team <metabolights-dev@ebi.ac.uk>"]
readme = "README.md"
packages = [
    { include = "app" },
    { include = "scripts" },
    { include = "tests" }
]

[tool.poetry.dependencies]
python = ">=3.8.1,<3.10"

itsdangerous = "2.0.1"
Jinja2 = "3.0.3"
werkzeug = "2.0.3"
boto3 = "1.12.37"
cascadict = "0.8.4"
cirpy = "1.0.2"
ctfile = "0.1.8"
chardet = "3.0.4"
dirsync = "2.2.5"
Flask = "1.1.2"
Flask-Cors = "3.0.8"
Flask-RESTful = "0.3.8"
flask-restful-swagger = "0.20.1"
fuzzywuzzy = "0.18.0"
google-api-core = "1.26.3"
google-api-python-client = "1.8.0"
google-auth-httplib2 = "0.0.3"
google-auth-oauthlib = "0.4.1"
gspread_dataframe = "3.0.3"
gunicorn = "21.2.0"
gspread = "3.4.2"
isatools = "0.11.0"
jira = "2.0.0"
lxml = "4.9.1"
marshmallow = "2.21.0"
metaspace2020 = "1.7.2"
mzml2isa = "1.0.3"
numpy = "1.18.2"
oauth2client = "4.1.3"
pandas = "0.25.3"
psycopg2 = "2.9.9"
pubchempy = "1.0.4"
pronto = "0.12.2"
python-Levenshtein = "0.12.2"
plotly = "4.6.0"
pillow = "9.0.1"
requests = "2.27.0"
recommonmark = "0.6.0"
xmltodict = "0.12.0"
zeep = "3.4.0"
Elasticsearch = "1.4.0"
Flask-Mail = "0.9.1"
SQLAlchemy = "1.4.35"
ftputil = "5.0.4"
rdkit = "2023.3.3"
chembl-structure-pipeline = "1.2.0"
Unidecode = "^1.3.8"
python-jose = "3.3.0"
passlib = "1.7.4"
tweepy = "4.14.0"
celery = "5.3.4"
toml = "0.10.2"
python-dotenv = "1.0.0"
redis = "5.0.1"
pydantic = "^2.4.2"
pydantic-settings = "^2.0.3"
metabolights-utils = "^1.1.5"
owlready2 = "^0.45"
Cython = "0.29.37"

[tool.poetry.group.dev.dependencies]
poetry = "^1.6.1"
pytest = "^7.4.3"
pylint = "^3.0.2"

[build-system]
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"

[tool.pylint.'MESSAGES CONTROL']
# disable = "W0612,C0301,C0115,C0116,C0303,C0114,W0311,W0718"
disable = "W,C,R,F"