s-expression-cwl.cwl

$graph:
- baseCommand: s-expression
  class: CommandLineTool
  hints:
    DockerRequirement:
      dockerPull: eoepca/s-expression:dev0.0.2
  id: clt
  inputs:
    input_reference:
      inputBinding:
        position: 1
        prefix: --input_reference
      type: Directory
    s_expression:
      inputBinding:
        position: 2
        prefix: --s-expression
      type: string
    cbn:
      inputBinding:
        position: 3
        prefix: --cbn
      type: string
  outputs:
    results:
      outputBinding:
        glob: .
      type: Directory
  requirements:
    EnvVarRequirement:
      envDef:
        PATH: /srv/conda/envs/env_app_snuggs/bin:/srv/conda/envs/env_app_snuggs/bin:/srv/conda/bin:/srv/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
    ResourceRequirement: {}
  #stderr: std.err
  #stdout: std.out
- class: Workflow
  doc: Applies s expressions to EO acquisitions
  id: s-expression
  inputs:
    input_reference:
      doc: Input product reference
      label: Input product reference
      type: Directory
    s_expression:
      doc: s expression
      label: s expression
      type: string
    cbn:
      doc: Common band name
      label: Common band name
      type: string
  label: s expressions
  outputs:
  - id: wf_outputs
    outputSource:
    - step_1/results
    type: Directory
  steps:
    step_1:
      in:
        input_reference: input_reference
        s_expression: s_expression
        cbn: cbn
      out:
      - results
      run: '#clt'
$namespaces:
  s: https://schema.org/
cwlVersion: v1.0
s:version: 0.0.2
s:softwareVersion: 0.0.2
s:citation: https://github.com/EOEPCA/app-s-expression#readme
s:codeRepository: https://github.com/EOEPCA/app-s-expression
s:dateCreated: "2022-05-03"
s:keywords: "s-expression, processing, EO, bands"
s:license: https://raw.githubusercontent.com/EOEPCA/eoepca/develop/LICENSE
s:releaseNotes: https://raw.githubusercontent.com/EOEPCA/app-s-expression/main/README.md
s:author:
  - class: s:Person
    s:name: Eoepca Developer
    s:email: developer@eoepca.org
    s:affiliation: EOEPCA
s:contributor:
  - class: s:Person
    s:name: Community Developer
    s:email: s:contributor@community.org
    s:affiliation: Community
schemas:
- http://schema.org/version/9.0/schemaorg-current-http.rdf