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Combine all the genome statistics alongside phylogeny #18

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chriswyatt1 opened this issue Aug 15, 2024 · 1 comment
Open

Combine all the genome statistics alongside phylogeny #18

chriswyatt1 opened this issue Aug 15, 2024 · 1 comment
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@chriswyatt1
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Combine all the output of QUAST, BUSCO and AGAT, as well as the tree in newick format from Orthofinder (ORTHOFINDER_GO)

Use the script in the additional script folder (R) to produce a plot with the phyogeny, plus all the stats to the right.

Could rewrite in Python if you prefer. Something like this:

image
@chriswyatt1 chriswyatt1 self-assigned this Aug 22, 2024
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Look into other options for plots. And which data to plot

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