Function initialize_cp

[thednainus]

Hello,

I would suggest to replace the line https://github.com/EpiModel/EpiModelHPC/blob/master/R/initialize_cp.R#L31

to x$control$start <- control$start

The reason for that is because EpiModel add several other "variables" to the control object. If I replace x$control to control, I will miss what was added to x$control, and then checkpoint will fail to restart for several reasons.

Cheers,
Fabricia.

[AdrienLeGuillou]

Hi @thednainus,

sorry for the (very) late answer. We just finished the implementation of a checkpointing system inside core netsim. We made a lot of changes to netsim over the past year and instead of porting them to netsim_hpc we merged everything in netsim.

For the new checkpointing system, here is documentation on our wiki here, and also in EpiModel's control.net function documentation. This will work with any way you call netsim. I has also built functionality for this to be used in his new slurmworkflow approach. (links in wiki as well)