pl-xfm is a ChRIS
ds plugin which takes in .obj and .mnc files
from an input directory, applies the linear transformation
specified by its arguments, and writes the results
to an output directory.
pl-xfm is a ChRIS plugin, meaning it can
run from either within ChRIS or the command-line.
To get started with local command-line usage, use Apptainer
(a.k.a. Singularity) to run pl-xfm as a container.
To print its available options, run:
singularity exec docker://fnndsc/pl-xfm cxfm --helpTo scale every object inside a directory named incoming/
to be larger by a factor of 2, run
singularity exec docker://fnndsc/pl-xfm cxfm --scale 2.0 incoming/ outgoing/