diff --git a/docs/build/doctrees/environment.pickle b/docs/build/doctrees/environment.pickle
index 0c5b3b0..1204820 100644
Binary files a/docs/build/doctrees/environment.pickle and b/docs/build/doctrees/environment.pickle differ
diff --git a/docs/build/doctrees/index.doctree b/docs/build/doctrees/index.doctree
index 275b757..e2c0270 100644
Binary files a/docs/build/doctrees/index.doctree and b/docs/build/doctrees/index.doctree differ
diff --git a/docs/build/html/_sources/index.rst.txt b/docs/build/html/_sources/index.rst.txt
index c473442..5c9a385 100644
--- a/docs/build/html/_sources/index.rst.txt
+++ b/docs/build/html/_sources/index.rst.txt
@@ -16,14 +16,7 @@ Welcome to pyrimidine's world of genetic algorithm
    :maxdepth: 2
    :caption: Document
 
-   source/Home
-   source/Install
-   source/Release History
-   source/API Design
-   source/Examples
-   source/Customization
-   source/Helpers
-   source/Media
+   source/index
 
 .. toctree::
    :maxdepth: 1
diff --git a/docs/build/html/index.html b/docs/build/html/index.html
index 6b9a30a..3d45b6b 100644
--- a/docs/build/html/index.html
+++ b/docs/build/html/index.html
@@ -15,7 +15,7 @@
     <script defer="defer" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" />
-    <link rel="next" title="pyrimidine: a universal framework for genetic algorithm" href="source/Home.html" />
+    <link rel="next" title="Welcome to pyrimidine’s world of genetic algorithm" href="source/index.html" />
 <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Neuton&amp;subset=latin" type="text/css" media="screen" charset="utf-8" />
 <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Nobile:regular,italic,bold,bolditalic&amp;subset=latin" type="text/css" media="screen" charset="utf-8" />
 <!--[if lte IE 6]>
@@ -34,7 +34,7 @@ <h3>Navigation</h3>
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
         <li class="right" >
-          <a href="source/Home.html" title="pyrimidine: a universal framework for genetic algorithm"
+          <a href="source/index.html" title="Welcome to pyrimidine’s world of genetic algorithm"
              accesskey="N">next</a> |</li>
         <li class="nav-item nav-item-0"><a href="#">pyrimidine 1.7 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Welcome to pyrimidine’s world of genetic algorithm</a></li> 
@@ -54,64 +54,24 @@ <h1>Welcome to pyrimidine’s world of genetic algorithm<a class="headerlink" hr
 <div class="toctree-wrapper compound">
 <p class="caption" role="heading"><span class="caption-text">Document</span></p>
 <ul>
-<li class="toctree-l1"><a class="reference internal" href="source/Home.html">pyrimidine: a universal framework for genetic algorithm</a><ul>
-<li class="toctree-l2"><a class="reference internal" href="source/Home.html#why">Why</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Home.html#download">Download</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Home.html#idea-of-algebra-inspired">Idea of algebra-inspired</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Home.html#fitness">Fitness</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Home.html#statement-of-need">Statement of need</a></li>
+<li class="toctree-l1"><a class="reference internal" href="source/index.html">Welcome to pyrimidine’s world of genetic algorithm</a><ul>
+<li class="toctree-l2"><a class="reference internal" href="source/Home.html">pyrimidine: a universal framework for genetic algorithm</a></li>
+<li class="toctree-l2"><a class="reference internal" href="source/Install.html">Installation and Getting Started</a></li>
+<li class="toctree-l2"><a class="reference internal" href="source/Release%20History.html">Release History</a></li>
+<li class="toctree-l2"><a class="reference internal" href="source/API%20Design.html">API Design</a></li>
+<li class="toctree-l2"><a class="reference internal" href="source/Examples.html">Examples and Comparison of Algorithms</a></li>
+<li class="toctree-l2"><a class="reference internal" href="source/Customization.html">Customization</a></li>
+<li class="toctree-l2"><a class="reference internal" href="source/Helpers.html">Helpers</a></li>
+<li class="toctree-l2"><a class="reference internal" href="source/Developers.html">Developers</a></li>
+<li class="toctree-l2"><a class="reference internal" href="source/Media.html">Misc</a></li>
+<li class="toctree-l2"><a class="reference external" href="https://github.com/Freakwill/pyrimidine">GitHub Page</a></li>
 </ul>
 </li>
-<li class="toctree-l1"><a class="reference internal" href="source/Install.html">Installation and Getting Started</a><ul>
-<li class="toctree-l2"><a class="reference internal" href="source/Install.html#install-pyrimidine">Install pyrimidine</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Install.html#requirements">Requirements</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Install.html#first-test">First test</a></li>
+<li class="toctree-l1"><a class="reference internal" href="source/index.html#modules-overview">Modules Overview</a><ul>
+<li class="toctree-l2"><a class="reference internal" href="source/pyrimidine.html">pyrimidine package</a></li>
 </ul>
 </li>
-<li class="toctree-l1"><a class="reference internal" href="source/Release%20History.html">Release History</a><ul>
-<li class="toctree-l2"><a class="reference internal" href="source/Release%20History.html#v1-7">v1.7</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Release%20History.html#v1-6">v1.6</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Release%20History.html#v1-5">v1.5</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Release%20History.html#before-v1-5">before v1.5</a></li>
-</ul>
-</li>
-<li class="toctree-l1"><a class="reference internal" href="source/API%20Design.html">API Design</a><ul>
-<li class="toctree-l2"><a class="reference internal" href="source/API%20Design.html#modules">Modules</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/API%20Design.html#metaclasses">Metaclasses</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/API%20Design.html#mixin-classes">Mixin Classes</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/API%20Design.html#basic-classes">Basic Classes</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/API%20Design.html#methods">Methods</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/API%20Design.html#arguments-parameters-attributions">Arguments/Parameters/Attributions</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/API%20Design.html#params-alias"><code class="docutils literal notranslate"><span class="pre">params</span></code>/<code class="docutils literal notranslate"><span class="pre">alias</span></code></a></li>
-</ul>
-</li>
-<li class="toctree-l1"><a class="reference internal" href="source/Examples.html">Examples and Comparison of Algorithms</a><ul>
-<li class="toctree-l2"><a class="reference internal" href="source/Examples.html#example-1">Example 1</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Examples.html#example-2">Example 2</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Examples.html#example-3-evolution-strategy">Example 3 — Evolution Strategy</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Examples.html#example-4-quantum-ga">Example 4 — Quantum GA</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Examples.html#example-5-multipopulation">Example 5 — MultiPopulation</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Examples.html#exmaple-6-game">Exmaple 6 — Game</a></li>
-</ul>
-</li>
-<li class="toctree-l1"><a class="reference internal" href="source/Customization.html">Customization</a><ul>
-<li class="toctree-l2"><a class="reference internal" href="source/Customization.html#principle">Principle</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Customization.html#customization-tricks">Customization Tricks</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Customization.html#evolution-strategy">Evolution Strategy</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Customization.html#differential-evolution">Differential Evolution</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Customization.html#local-search">Local Search</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Customization.html#hacking">Hacking</a></li>
-</ul>
-</li>
-<li class="toctree-l1"><a class="reference internal" href="source/Helpers.html">Helpers</a><ul>
-<li class="toctree-l2"><a class="reference internal" href="source/Helpers.html#optimization">Optimization</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Helpers.html#decorators">Decorators</a></li>
-</ul>
-</li>
-<li class="toctree-l1"><a class="reference internal" href="source/Media.html">Misc</a><ul>
-<li class="toctree-l2"><a class="reference internal" href="source/Media.html#pictures">Pictures</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Media.html#videos">Videos</a></li>
-<li class="toctree-l2"><a class="reference internal" href="source/Media.html#tutorial">Tutorial</a></li>
+<li class="toctree-l1"><a class="reference internal" href="source/index.html#indices">Indices</a><ul class="simple">
 </ul>
 </li>
 </ul>
@@ -165,8 +125,8 @@ <h3><a href="#">Table of Contents</a></h3>
   </div>
   <div>
     <h4>Next topic</h4>
-    <p class="topless"><a href="source/Home.html"
-                          title="next chapter">pyrimidine: a universal framework for genetic algorithm</a></p>
+    <p class="topless"><a href="source/index.html"
+                          title="next chapter">Welcome to pyrimidine’s world of genetic algorithm</a></p>
   </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
@@ -199,7 +159,7 @@ <h3>Navigation</h3>
           <a href="py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
         <li class="right" >
-          <a href="source/Home.html" title="pyrimidine: a universal framework for genetic algorithm"
+          <a href="source/index.html" title="Welcome to pyrimidine’s world of genetic algorithm"
              >next</a> |</li>
         <li class="nav-item nav-item-0"><a href="#">pyrimidine 1.7 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Welcome to pyrimidine’s world of genetic algorithm</a></li> 
diff --git a/docs/build/html/searchindex.js b/docs/build/html/searchindex.js
index 3630167..d262fc7 100644
--- a/docs/build/html/searchindex.js
+++ b/docs/build/html/searchindex.js
@@ -1 +1 @@
-Search.setIndex({"alltitles": {"A simple example \u2014 Knapsack problem": [[4, "a-simple-example-knapsack-problem"]], "API Design": [[1, "api-design"]], "About": [[0, null], [10, null]], "About elements(individuals in a population or populations in a multi-population/community)": [[1, "about-elements-individuals-in-a-population-or-populations-in-a-multi-population-community"]], "About fitness": [[1, "about-fitness"]], "Another Problem": [[4, "another-problem"]], "Arguments/Parameters/Attributions": [[1, "arguments-parameters-attributions"]], "Basic Classes": [[1, "basic-classes"]], "Basic operation": [[1, "basic-operation"]], "Cache": [[5, "cache"]], "Chromosomes": [[1, "chromosomes"]], "Codes": [[4, "codes"]], "Comparison of Algorithms": [[4, "comparison-of-algorithms"]], "Contents": [[10, null]], "Create quantum GA": [[4, "create-quantum-ga"]], "Customization": [[2, "customization"]], "Customization Tricks": [[2, "customization-tricks"]], "Decorators": [[5, "decorators"]], "Developers": [[0, null], [3, "developers"], [3, "id1"]], "Differential Evolution": [[2, "differential-evolution"]], "Document": [[0, null]], "Download": [[6, "download"]], "Environment": [[1, "environment"]], "Evolution Strategy": [[2, "evolution-strategy"]], "Evolutionary Strategy": [[2, "evolutionary-strategy"]], "Example 1": [[4, "example-1"]], "Example 2": [[4, "example-2"]], "Example 3 \u2014 Evolution Strategy": [[4, "example-3-evolution-strategy"]], "Example 4 \u2014 Quantum GA": [[4, "example-4-quantum-ga"]], "Example 5 \u2014 MultiPopulation": [[4, "example-5-multipopulation"]], "Examples and Comparison of Algorithms": [[4, "examples-and-comparison-of-algorithms"]], "Exmaple 6 \u2014 Game": [[4, "exmaple-6-game"]], "First test": [[7, "first-test"]], "Fitness": [[6, "fitness"]], "Fitness models": [[1, "fitness-models"]], "GA with local search": [[2, "ga-with-local-search"]], "Genetic operation": [[1, "genetic-operation"]], "Hacking": [[2, "hacking"]], "Helpers": [[5, "helpers"]], "Hybrid-population": [[4, "hybrid-population"]], "Idea of algebra-inspired": [[6, "idea-of-algebra-inspired"]], "Indices": [[0, "indices"], [10, "indices"]], "Individuals": [[1, "individuals"]], "Install pyrimidine": [[7, "install-pyrimidine"]], "Installation and Getting Started": [[7, "installation-and-getting-started"]], "Iterative models/algorithms": [[1, "iterative-models-algorithms"]], "List-like operation": [[1, "list-like-operation"]], "Local Search": [[2, "local-search"]], "Memory": [[5, "memory"]], "Metaclasses": [[1, "metaclasses"]], "Methods": [[1, "methods"]], "Misc": [[8, "misc"]], "Mixin Classes": [[1, "mixin-classes"]], "Modules": [[1, "modules"]], "Modules Overview": [[0, "modules-overview"], [10, "modules-overview"]], "Multi-populations": [[1, "multi-populations"]], "Optimization": [[5, "optimization"]], "Optimizer": [[5, "optimizer"]], "Others": [[1, "others"]], "Philosophy": [[3, "philosophy"]], "Pictures": [[8, "pictures"]], "Population models": [[1, "population-models"]], "Populations": [[1, "populations"]], "Principle": [[2, "principle"]], "Release History": [[9, "release-history"]], "Requirements": [[7, "requirements"]], "Side-effect and pure": [[1, "side-effect-and-pure"]], "Side_effect": [[5, "side-effect"]], "Source code": [[4, "source-code"]], "Statement of need": [[6, "statement-of-need"]], "Subpackages": [[11, null]], "Tabu Searching": [[2, "tabu-searching"]], "Tutorial": [[8, "tutorial"]], "Videos": [[8, "videos"]], "Visualization": [[4, "visualization"]], "Visualization and comparison": [[4, "visualization-and-comparison"]], "Welcome to pyrimidine\u2019s world of genetic algorithm": [[0, "welcome-to-pyrimidine-s-world-of-genetic-algorithm"], [10, "welcome-to-pyrimidine-s-world-of-genetic-algorithm"]], "Why": [[6, "why"]], "before v1.5": [[9, "before-v1-5"]], "de_minimize": [[5, "de-minimize"]], "ga_minimize": [[5, "ga-minimize"]], "params/alias": [[1, "params-alias"]], "pyrimidine package": [[11, "pyrimidine-package"]], "pyrimidine.base module": [[11, "module-pyrimidine.base"]], "pyrimidine.benchmarks subpackage": [[12, "pyrimidine-benchmarks-subpackage"]], "pyrimidine.benchmarks.approximation module": [[12, "module-pyrimidine.benchmarks.approximation"]], "pyrimidine.benchmarks.cluster module": [[12, "module-pyrimidine.benchmarks.cluster"]], "pyrimidine.benchmarks.fitting module": [[12, "module-pyrimidine.benchmarks.fitting"]], "pyrimidine.benchmarks.linear_model module": [[12, "module-pyrimidine.benchmarks.linear_model"]], "pyrimidine.benchmarks.matrix module": [[12, "module-pyrimidine.benchmarks.matrix"]], "pyrimidine.benchmarks.neural_network module": [[12, "module-pyrimidine.benchmarks.neural_network"]], "pyrimidine.benchmarks.optimization module": [[12, "module-pyrimidine.benchmarks.optimization"]], "pyrimidine.benchmarks.others module": [[12, "module-pyrimidine.benchmarks.others"]], "pyrimidine.benchmarks.special module": [[12, "module-pyrimidine.benchmarks.special"]], "pyrimidine.chromosome module": [[11, "module-pyrimidine.chromosome"]], "pyrimidine.de module": [[11, "module-pyrimidine.de"]], "pyrimidine.deco module": [[11, "module-pyrimidine.deco"]], "pyrimidine.ep module": [[11, "module-pyrimidine.ep"]], "pyrimidine.errors module": [[11, "module-pyrimidine.errors"]], "pyrimidine.es module": [[11, "module-pyrimidine.es"]], "pyrimidine.gene module": [[11, "module-pyrimidine.gene"]], "pyrimidine.individual module": [[11, "module-pyrimidine.individual"]], "pyrimidine.learn subpackage": [[13, "pyrimidine-learn-subpackage"]], "pyrimidine.learn.cluster module": [[13, "module-pyrimidine.learn.cluster"]], "pyrimidine.learn.linear_regression module": [[13, "module-pyrimidine.learn.linear_regression"]], "pyrimidine.learn.neural_network module": [[13, "module-pyrimidine.learn.neural_network"]], "pyrimidine.local_search subpackage": [[14, "pyrimidine-local-search-subpackage"]], "pyrimidine.local_search.random_walk module": [[14, "module-pyrimidine.local_search.random_walk"]], "pyrimidine.local_search.simulated_annealing module": [[14, "module-pyrimidine.local_search.simulated_annealing"]], "pyrimidine.local_search.tabu_search module": [[14, "module-pyrimidine.local_search.tabu_search"]], "pyrimidine.meta module": [[11, "module-pyrimidine.meta"]], "pyrimidine.misc subpackage": [[15, "pyrimidine-misc-subpackage"]], "pyrimidine.misc.aco module": [[15, "module-pyrimidine.misc.aco"]], "pyrimidine.misc.ba module": [[15, "module-pyrimidine.misc.ba"]], "pyrimidine.misc.fa module": [[15, "module-pyrimidine.misc.fa"]], "pyrimidine.misc.gsa module": [[15, "module-pyrimidine.misc.gsa"]], "pyrimidine.misc.sma module": [[15, "module-pyrimidine.misc.sma"]], "pyrimidine.misc.ssa module": [[15, "module-pyrimidine.misc.ssa"]], "pyrimidine.multipopulation module": [[11, "module-pyrimidine.multipopulation"]], "pyrimidine.optimize module": [[11, "module-pyrimidine.optimize"]], "pyrimidine.population module": [[11, "module-pyrimidine.population"]], "pyrimidine.pso module": [[11, "module-pyrimidine.pso"]], "pyrimidine.qga module": [[11, "module-pyrimidine.qga"]], "pyrimidine.saga module": [[11, "module-pyrimidine.saga"]], "pyrimidine.studga module": [[11, "module-pyrimidine.studga"]], "pyrimidine: a universal framework for genetic algorithm": [[6, "pyrimidine-a-universal-framework-for-genetic-algorithm"]], "use QuantumChromosome": [[4, "use-quantumchromosome"]], "v1.5": [[9, "v1-5"]], "v1.6": [[9, "v1-6"]], "v1.7": [[9, "v1-7"]]}, "docnames": ["index", "source/API Design", "source/Customization", "source/Developers", "source/Examples", "source/Helpers", "source/Home", "source/Install", "source/Media", "source/Release History", "source/index", "source/pyrimidine", "source/pyrimidine.benchmarks", "source/pyrimidine.learn", "source/pyrimidine.local_search", "source/pyrimidine.misc"], "envversion": {"sphinx": 61, "sphinx.domains.c": 3, "sphinx.domains.changeset": 1, "sphinx.domains.citation": 1, "sphinx.domains.cpp": 9, "sphinx.domains.index": 1, "sphinx.domains.javascript": 3, "sphinx.domains.math": 2, "sphinx.domains.python": 4, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx.ext.intersphinx": 1, "sphinx.ext.todo": 2}, "filenames": ["index.rst", "source/API Design.md", "source/Customization.md", "source/Developers.md", "source/Examples.md", "source/Helpers.md", "source/Home.md", "source/Install.md", "source/Media.md", "source/Release History.md", "source/index.rst", "source/pyrimidine.rst", "source/pyrimidine.benchmarks.rst", "source/pyrimidine.learn.rst", "source/pyrimidine.local_search.rst", "source/pyrimidine.misc.rst"], "indexentries": {}, "objects": {"pyrimidine": [[11, 0, 0, "-", "base"], [11, 0, 0, "-", "chromosome"], [11, 0, 0, "-", "de"], [11, 0, 0, "-", "deco"], [11, 0, 0, "-", "ep"], [11, 0, 0, "-", "errors"], [11, 0, 0, "-", "es"], [11, 0, 0, "-", "gene"], [11, 0, 0, "-", "individual"], [11, 0, 0, "-", "meta"], [11, 0, 0, "-", "multipopulation"], [11, 0, 0, "-", "optimize"], [11, 0, 0, "-", "population"], [11, 0, 0, "-", "pso"], [11, 0, 0, "-", "qga"], [11, 0, 0, "-", "saga"], [11, 0, 0, "-", "studga"], [11, 0, 0, "-", "utils"]], "pyrimidine.base": [[11, 1, 1, "", "BaseChromosome"], [11, 1, 1, "", "BaseCommunity"], [11, 1, 1, "", "BaseEnvironment"], [11, 1, 1, "", "BaseGene"], [11, 1, 1, "", "BaseIndividual"], [11, 1, 1, "", "BaseMultiPopulation"], [11, 1, 1, "", "BasePopulation"], [11, 5, 1, "", "random"]], "pyrimidine.base.BaseChromosome": [[11, 2, 1, "", "alias"], [11, 3, 1, "", "class_name"], [11, 4, 1, "", "cross"], [11, 4, 1, "", "decode"], [11, 2, 1, "id0", "default_size"], [11, 2, 1, "id7", "element_class"], [11, 4, 1, "", "equal_to"], [11, 4, 1, "", "mutate"], [11, 2, 1, "", "params"], [11, 4, 1, "", "random"], [11, 4, 1, "", "replicate"], [11, 4, 1, "", "transition"], [11, 4, 1, "", "x"]], "pyrimidine.base.BaseCommunity": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "flatten"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.base.BaseEnvironment": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "evaluate"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "select"]], "pyrimidine.base.BaseGene": [[11, 4, 1, "", "random"], [11, 2, 1, "id8", "values"]], "pyrimidine.base.BaseIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "cross"], [11, 4, 1, "", "cross2"], [11, 4, 1, "", "decode"], [11, 2, 1, "", "default_size"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "get_neighbour"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mutate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "replicate"], [11, 4, 1, "", "transition"]], "pyrimidine.base.BaseMultiPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 2, 1, "id9", "default_size"], [11, 2, 1, "id10", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "flatten"], [11, 4, 1, "", "get_best_individual"], [11, 3, 1, "", "individuals"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mate"], [11, 4, 1, "", "migrate"], [11, 4, 1, "", "mutate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "select"], [11, 4, 1, "", "transition"]], "pyrimidine.base.BasePopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "cross"], [11, 2, 1, "", "default_size"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "get_rank"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "local_search"], [11, 4, 1, "", "mate"], [11, 4, 1, "", "mate_with"], [11, 4, 1, "", "merge"], [11, 4, 1, "", "migrate"], [11, 4, 1, "", "mutate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "rank"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "select"], [11, 4, 1, "", "transition"]], "pyrimidine.benchmarks": [[12, 0, 0, "-", "approximation"], [12, 0, 0, "-", "cluster"], [12, 0, 0, "-", "fitting"], [12, 0, 0, "-", "linear_model"], [12, 0, 0, "-", "matrix"], [12, 0, 0, "-", "neural_network"], [12, 0, 0, "-", "optimization"], [12, 0, 0, "-", "others"], [12, 0, 0, "-", "special"]], "pyrimidine.benchmarks.approximation": [[12, 1, 1, "", "Function1DApproximation"], [12, 5, 1, "", "lin_comb"]], "pyrimidine.benchmarks.cluster": [[12, 1, 1, "", "KMeans"]], "pyrimidine.benchmarks.cluster.KMeans": [[12, 4, 1, "", "random"]], "pyrimidine.benchmarks.fitting": [[12, 1, 1, "", "CurveFitting"], [12, 1, 1, "", "Fitting"], [12, 1, 1, "", "Painting"], [12, 5, 1, "", "basis"]], "pyrimidine.benchmarks.fitting.CurveFitting": [[12, 4, 1, "", "fit"]], "pyrimidine.benchmarks.fitting.Fitting": [[12, 4, 1, "", "fit"], [12, 4, 1, "", "random"]], "pyrimidine.benchmarks.fitting.Painting": [[12, 4, 1, "", "fit"], [12, 4, 1, "", "toimage"]], "pyrimidine.benchmarks.linear_model": [[12, 5, 1, "", "fun"], [12, 5, 1, "", "lsq"]], "pyrimidine.benchmarks.matrix": [[12, 1, 1, "", "NMF"]], "pyrimidine.benchmarks.matrix.NMF": [[12, 4, 1, "", "random"]], "pyrimidine.benchmarks.neural_network": [[12, 1, 1, "", "MLP"], [12, 1, 1, "", "RNN"]], "pyrimidine.benchmarks.neural_network.MLP": [[12, 4, 1, "", "random"]], "pyrimidine.benchmarks.neural_network.RNN": [[12, 4, 1, "", "random"]], "pyrimidine.benchmarks.optimization": [[12, 1, 1, "", "CurvePath"], [12, 1, 1, "", "FacilityLayout"], [12, 1, 1, "", "Knapsack"], [12, 1, 1, "", "MLE"], [12, 1, 1, "", "MinSpanningTree"], [12, 1, 1, "", "MixMLE"], [12, 1, 1, "", "MultiKnapsack"], [12, 1, 1, "", "ShortestPath"]], "pyrimidine.benchmarks.optimization.FacilityLayout": [[12, 4, 1, "", "random"]], "pyrimidine.benchmarks.optimization.Knapsack": [[12, 4, 1, "", "argsort"], [12, 4, 1, "", "example"], [12, 3, 1, "", "n_bags"], [12, 4, 1, "", "random"], [12, 3, 1, "", "sorted"]], "pyrimidine.benchmarks.optimization.MLE": [[12, 4, 1, "", "random"]], "pyrimidine.benchmarks.optimization.MixMLE": [[12, 4, 1, "", "logpdf"], [12, 4, 1, "", "random"]], "pyrimidine.benchmarks.optimization.MultiKnapsack": [[12, 4, 1, "", "argsort"], [12, 4, 1, "", "random"]], "pyrimidine.benchmarks.optimization.ShortestPath": [[12, 4, 1, "", "random"]], "pyrimidine.benchmarks.others": [[12, 1, 1, "", "Kantorovich"]], "pyrimidine.benchmarks.special": [[12, 5, 1, "", "alpine"], [12, 5, 1, "", "griewangk"], [12, 5, 1, "", "hansen"], [12, 5, 1, "", "michalewiez"], [12, 5, 1, "", "rastrigrin"], [12, 5, 1, "", "rosenbrock"], [12, 5, 1, "", "schaffer"]], "pyrimidine.chromosome": [[11, 1, 1, "", "ArrayChromosome"], [11, 1, 1, "", "BinaryChromosome"], [11, 1, 1, "", "CircleChromosome"], [11, 1, 1, "", "DigitChromosome"], [11, 1, 1, "", "FloatChromosome"], [11, 1, 1, "", "FloatMatrixChromosome"], [11, 1, 1, "", "ListChromosome"], [11, 1, 1, "", "MatrixChromosome"], [11, 1, 1, "", "NaturalChromosome"], [11, 1, 1, "", "NumpyArrayChromosome"], [11, 1, 1, "", "PermutationChromosome"], [11, 1, 1, "", "PositiveChromosome"], [11, 1, 1, "", "ProbabilityChromosome"], [11, 1, 1, "", "QuantumChromosome"], [11, 1, 1, "", "StochasticMatrixChromosome"], [11, 1, 1, "", "UnitFloatChromosome"], [11, 1, 1, "", "VectorChromosome"], [11, 5, 1, "", "random"]], "pyrimidine.chromosome.ArrayChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "copy"], [11, 4, 1, "", "cross"], [11, 2, 1, "id11", "element_class"], [11, 4, 1, "", "mutate"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.BinaryChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "dual"], [11, 2, 1, "", "element_class"], [11, 4, 1, "", "mutate"], [11, 4, 1, "", "one"], [11, 2, 1, "", "params"], [11, 4, 1, "", "zero"]], "pyrimidine.chromosome.CircleChromosome": [[11, 2, 1, "", "alias"], [11, 2, 1, "", "element_class"], [11, 4, 1, "", "mutate"], [11, 4, 1, "", "normalize"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.DigitChromosome": [[11, 2, 1, "", "alias"], [11, 2, 1, "", "element_class"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.FloatChromosome": [[11, 2, 1, "", "alias"], [11, 2, 1, "", "element_class"], [11, 4, 1, "", "mutate"], [11, 2, 1, "", "params"], [11, 4, 1, "", "random_neighbour"], [11, 2, 1, "", "sigma"]], "pyrimidine.chromosome.FloatMatrixChromosome": [[11, 2, 1, "", "alias"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.ListChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "copy"], [11, 4, 1, "", "cross"], [11, 2, 1, "id12", "element_class"], [11, 4, 1, "", "mutate"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.MatrixChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "cross"], [11, 4, 1, "", "mutate"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.NaturalChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "dual"], [11, 2, 1, "", "element_class"], [11, 4, 1, "", "mutate"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.NumpyArrayChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "clone"], [11, 4, 1, "", "copy"], [11, 4, 1, "", "cross"], [11, 4, 1, "", "cross2"], [11, 2, 1, "id13", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "mutate"], [11, 2, 1, "", "params"], [11, 4, 1, "", "random"]], "pyrimidine.chromosome.PermutationChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "cross"], [11, 2, 1, "", "default_size"], [11, 4, 1, "", "dual"], [11, 2, 1, "", "element_class"], [11, 4, 1, "", "identity"], [11, 4, 1, "", "move_toward"], [11, 4, 1, "", "mutate"], [11, 2, 1, "", "params"], [11, 4, 1, "", "random"]], "pyrimidine.chromosome.PositiveChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "normalize"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.ProbabilityChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "check"], [11, 4, 1, "", "cross"], [11, 2, 1, "", "element_class"], [11, 4, 1, "", "mutate"], [11, 4, 1, "", "normalize"], [11, 2, 1, "", "params"], [11, 4, 1, "", "random"], [11, 4, 1, "", "random_neighbour"]], "pyrimidine.chromosome.QuantumChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "decode"], [11, 4, 1, "", "measure"], [11, 3, 1, "", "measure_result"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.StochasticMatrixChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "normalize"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.UnitFloatChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "dual"], [11, 2, 1, "", "element_class"], [11, 4, 1, "", "mutate"], [11, 4, 1, "", "normalize"], [11, 2, 1, "", "params"], [11, 4, 1, "", "tobinary"]], "pyrimidine.chromosome.VectorChromosome": [[11, 2, 1, "", "alias"], [11, 2, 1, "", "params"]], "pyrimidine.de": [[11, 1, 1, "", "DifferentialEvolution"], [11, 1, 1, "", "DifferentialEvolution1"], [11, 5, 1, "", "random"]], "pyrimidine.de.DifferentialEvolution": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 2, 1, "", "default_size"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "init"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "move"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "transition"]], "pyrimidine.de.DifferentialEvolution1": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "init"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "move"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.deco": [[11, 1, 1, "", "Regester"], [11, 1, 1, "", "add_cache"], [11, 1, 1, "", "add_memory"], [11, 5, 1, "", "basic_memory"], [11, 5, 1, "", "clear_cache"], [11, 5, 1, "", "clear_fitness"], [11, 5, 1, "", "method_cache"], [11, 1, 1, "", "regester_map"], [11, 1, 1, "", "set_fitness"], [11, 5, 1, "", "side_effect"]], "pyrimidine.deco.add_cache": [[11, 2, 1, "", "attrs"], [11, 2, 1, "", "cmd"], [11, 2, 1, "", "methods"]], "pyrimidine.ep": [[11, 1, 1, "", "BaseEPIndividual"], [11, 1, 1, "", "EvolutionProgramming"]], "pyrimidine.ep.BaseEPIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "decode"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mutate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 3, 1, "", "variance"]], "pyrimidine.ep.EvolutionProgramming": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "select"], [11, 4, 1, "", "transition"]], "pyrimidine.errors": [[11, 6, 1, "", "RegesterError"], [11, 6, 1, "", "UnavalibleAttributeError"], [11, 6, 1, "", "UnknownSizeError"]], "pyrimidine.es": [[11, 1, 1, "", "EvolutionStrategy"]], "pyrimidine.es.EvolutionStrategy": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "init"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "select_best_individuals"], [11, 4, 1, "", "transition"]], "pyrimidine.gene": [[11, 1, 1, "", "BinaryGene"], [11, 1, 1, "", "CircleGene"], [11, 1, 1, "", "DigitGene"], [11, 1, 1, "", "FloatGene"], [11, 1, 1, "", "IntegerGene"], [11, 1, 1, "", "NaturalGene"], [11, 1, 1, "", "PeriodicGene"], [11, 1, 1, "", "SemiCircleGene"], [11, 1, 1, "", "UnitFloatGene"]], "pyrimidine.gene.BinaryGene": [[11, 4, 1, "", "random"]], "pyrimidine.gene.CircleGene": [[11, 2, 1, "", "lb"], [11, 2, 1, "", "period"], [11, 2, 1, "", "ub"]], "pyrimidine.gene.FloatGene": [[11, 2, 1, "", "lb"], [11, 4, 1, "", "random"], [11, 2, 1, "", "ub"]], "pyrimidine.gene.IntegerGene": [[11, 2, 1, "", "lb"], [11, 4, 1, "", "random"], [11, 2, 1, "", "ub"]], "pyrimidine.gene.NaturalGene": [[11, 2, 1, "", "lb"], [11, 4, 1, "", "random"], [11, 2, 1, "", "ub"]], "pyrimidine.gene.PeriodicGene": [[11, 3, 1, "", "period"]], "pyrimidine.gene.SemiCircleGene": [[11, 2, 1, "", "lb"], [11, 2, 1, "", "ub"]], "pyrimidine.gene.UnitFloatGene": [[11, 2, 1, "", "lb"], [11, 2, 1, "", "ub"]], "pyrimidine.individual": [[11, 1, 1, "", "AgeIndividual"], [11, 1, 1, "", "GenderIndividual"], [11, 1, 1, "", "MixedIndividual"], [11, 1, 1, "", "MonoIndividual"], [11, 1, 1, "", "MultiIndividual"], [11, 1, 1, "", "PhantomIndividual"], [11, 2, 1, "", "PolyIndividual"], [11, 5, 1, "", "binaryIndividual"], [11, 5, 1, "", "makeBinaryIndividual"], [11, 5, 1, "", "makeIndividual"]], "pyrimidine.individual.AgeIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.individual.GenderIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 3, 1, "", "gender"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.individual.MixedIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "default_size"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "random"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.individual.MonoIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "chromosome"], [11, 4, 1, "", "decode"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "random"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "set_size"]], "pyrimidine.individual.MultiIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.individual.PhantomIndividual": [[11, 4, 1, "", "after_setter"], [11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "backup"], [11, 3, 1, "", "cache"], [11, 4, 1, "", "clear_cache"], [11, 4, 1, "", "cleared"], [11, 4, 1, "", "copy"], [11, 3, 1, "", "elements"], [11, 3, 1, "", "fitness"], [11, 4, 1, "", "init"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 2, 1, "", "phantom"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "set_cache"]], "pyrimidine.learn": [[13, 0, 0, "-", "cluster"], [13, 0, 0, "-", "linear_regression"], [13, 0, 0, "-", "neural_network"]], "pyrimidine.learn.cluster": [[13, 1, 1, "", "GAKmeans"]], "pyrimidine.learn.cluster.GAKmeans": [[13, 4, 1, "", "config"], [13, 4, 1, "", "create_model"], [13, 2, 1, "", "estimated_params"], [13, 4, 1, "", "set_fit_request"], [13, 4, 1, "", "set_score_request"]], "pyrimidine.learn.linear_regression": [[13, 1, 1, "", "GALinearRegression"]], "pyrimidine.learn.linear_regression.GALinearRegression": [[13, 4, 1, "", "config"], [13, 4, 1, "", "create_model"], [13, 2, 1, "", "estimated_params"], [13, 4, 1, "", "set_fit_request"], [13, 4, 1, "", "set_score_request"]], "pyrimidine.learn.neural_network": [[13, 1, 1, "", "GAMLPRegressor"]], "pyrimidine.learn.neural_network.GAMLPRegressor": [[13, 4, 1, "", "config"], [13, 4, 1, "", "create_model"], [13, 2, 1, "", "estimated_params"], [13, 2, 1, "", "hidden_dim"], [13, 2, 1, "", "max_iter"], [13, 2, 1, "", "n_layers"], [13, 4, 1, "", "set_fit_request"], [13, 4, 1, "", "set_score_request"]], "pyrimidine.local_search": [[14, 0, 0, "-", "random_walk"], [14, 0, 0, "-", "simulated_annealing"], [14, 0, 0, "-", "tabu_search"]], "pyrimidine.local_search.random_walk": [[14, 1, 1, "", "RandomWalk"]], "pyrimidine.local_search.random_walk.RandomWalk": [[14, 4, 1, "", "mutate"], [14, 2, 1, "", "params"], [14, 4, 1, "", "transit"]], "pyrimidine.local_search.simulated_annealing": [[14, 1, 1, "", "SimulatedAnnealing"]], "pyrimidine.local_search.simulated_annealing.SimulatedAnnealing": [[14, 2, 1, "", "alias"], [14, 4, 1, "", "apply"], [14, 3, 1, "", "elements"], [14, 4, 1, "", "isa"], [14, 4, 1, "", "move"], [14, 3, 1, "", "n_elements"], [14, 2, 1, "id0", "params"], [14, 4, 1, "", "regester"], [14, 4, 1, "", "regester_map"], [14, 4, 1, "", "transition"]], "pyrimidine.local_search.tabu_search": [[14, 1, 1, "", "BaseTabuSearch"], [14, 1, 1, "", "SimpleTabuSearch"], [14, 5, 1, "", "random"]], "pyrimidine.local_search.tabu_search.BaseTabuSearch": [[14, 2, 1, "", "alias"], [14, 4, 1, "", "apply"], [14, 4, 1, "", "backup"], [14, 4, 1, "", "copy"], [14, 3, 1, "", "elements"], [14, 3, 1, "", "fitness"], [14, 4, 1, "", "get_neighbour"], [14, 4, 1, "", "init"], [14, 4, 1, "", "isa"], [14, 3, 1, "", "memory"], [14, 3, 1, "", "n_elements"], [14, 2, 1, "", "params"], [14, 4, 1, "", "regester"], [14, 4, 1, "", "regester_map"], [14, 4, 1, "", "set_memory"], [14, 3, 1, "", "solution"], [14, 4, 1, "", "transition"], [14, 4, 1, "", "update_tabu_list"]], "pyrimidine.local_search.tabu_search.SimpleTabuSearch": [[14, 2, 1, "", "alias"], [14, 4, 1, "", "apply"], [14, 3, 1, "", "elements"], [14, 4, 1, "", "get_neighbour"], [14, 4, 1, "", "isa"], [14, 3, 1, "", "n_elements"], [14, 2, 1, "", "params"], [14, 4, 1, "", "regester"], [14, 4, 1, "", "regester_map"]], "pyrimidine.meta": [[11, 1, 1, "", "MetaArray"], [11, 1, 1, "", "MetaContainer"], [11, 1, 1, "", "MetaHighContainer"], [11, 1, 1, "", "MetaList"], [11, 1, 1, "", "MetaSingle"], [11, 1, 1, "", "MetaTuple"], [11, 1, 1, "", "ParamType"], [11, 1, 1, "", "System"], [11, 5, 1, "", "inherit"]], "pyrimidine.meta.MetaContainer": [[11, 4, 1, "", "random"]], "pyrimidine.meta.ParamType": [[11, 4, 1, "", "mixin"], [11, 4, 1, "", "set"], [11, 4, 1, "", "set_params"]], "pyrimidine.misc": [[15, 0, 0, "-", "aco"], [15, 0, 0, "-", "ba"], [15, 0, 0, "-", "fa"], [15, 0, 0, "-", "gsa"], [15, 0, 0, "-", "sma"], [15, 0, 0, "-", "ssa"]], "pyrimidine.misc.aco": [[15, 1, 1, "", "BaseAnt"], [15, 1, 1, "", "BaseAntColony"], [15, 5, 1, "", "random"]], "pyrimidine.misc.aco.BaseAnt": [[15, 4, 1, "", "get_length"], [15, 4, 1, "", "init"], [15, 4, 1, "", "move"], [15, 2, 1, "", "params"], [15, 4, 1, "", "release_pheromone"], [15, 4, 1, "", "reset"]], "pyrimidine.misc.aco.BaseAntColony": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "apply"], [15, 2, 1, "", "element_class"], [15, 3, 1, "", "elements"], [15, 4, 1, "", "from_distances"], [15, 4, 1, "", "from_positions"], [15, 4, 1, "", "init"], [15, 4, 1, "", "isa"], [15, 4, 1, "", "move"], [15, 3, 1, "", "move_proba"], [15, 3, 1, "", "n_elements"], [15, 2, 1, "", "params"], [15, 4, 1, "", "regester"], [15, 4, 1, "", "regester_map"], [15, 4, 1, "", "transition"], [15, 4, 1, "", "update_pheromone"]], "pyrimidine.misc.ba": [[15, 1, 1, "", "Bat"], [15, 1, 1, "", "Bats"], [15, 5, 1, "", "random"]], "pyrimidine.misc.ba.Bat": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "apply"], [15, 3, 1, "", "elements"], [15, 4, 1, "", "isa"], [15, 4, 1, "", "move"], [15, 3, 1, "", "n_elements"], [15, 2, 1, "", "params"], [15, 3, 1, "", "position"], [15, 4, 1, "", "regester"], [15, 4, 1, "", "regester_map"], [15, 3, 1, "", "velocity"]], "pyrimidine.misc.ba.Bats": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "apply"], [15, 3, 1, "", "elements"], [15, 4, 1, "", "init"], [15, 4, 1, "", "isa"], [15, 3, 1, "", "n_elements"], [15, 2, 1, "", "params"], [15, 4, 1, "", "regester"], [15, 4, 1, "", "regester_map"], [15, 4, 1, "", "transition"]], "pyrimidine.misc.fa": [[15, 1, 1, "", "BaseFirefly"], [15, 1, 1, "", "StandardFireflies"], [15, 5, 1, "", "attractiveness"]], "pyrimidine.misc.fa.BaseFirefly": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "apply"], [15, 3, 1, "", "elements"], [15, 4, 1, "", "isa"], [15, 3, 1, "", "n_elements"], [15, 2, 1, "", "params"], [15, 4, 1, "", "random_move"], [15, 4, 1, "", "regester"], [15, 4, 1, "", "regester_map"], [15, 4, 1, "", "update_vilocity"]], "pyrimidine.misc.fa.StandardFireflies": [[15, 2, 1, "", "element_class"], [15, 2, 1, "", "params"], [15, 4, 1, "", "transition"]], "pyrimidine.misc.gsa": [[15, 1, 1, "", "GravitySearch"], [15, 1, 1, "", "Particle"], [15, 5, 1, "", "random"]], "pyrimidine.misc.gsa.GravitySearch": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "compute_accelerate"], [15, 4, 1, "", "compute_mass"], [15, 2, 1, "", "default_size"], [15, 2, 1, "", "element_class"], [15, 4, 1, "", "move"], [15, 2, 1, "", "params"], [15, 4, 1, "", "transition"]], "pyrimidine.misc.gsa.Particle": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "apply"], [15, 2, 1, "", "default_size"], [15, 2, 1, "", "element_class"], [15, 3, 1, "", "elements"], [15, 4, 1, "", "isa"], [15, 4, 1, "", "move"], [15, 3, 1, "", "n_elements"], [15, 2, 1, "", "params"], [15, 3, 1, "", "position"], [15, 4, 1, "", "regester"], [15, 4, 1, "", "regester_map"], [15, 3, 1, "", "velocity"]], "pyrimidine.misc.sma": [[15, 1, 1, "", "SlimeMould"], [15, 1, 1, "", "SlimyMaterial"], [15, 5, 1, "", "random"]], "pyrimidine.misc.sma.SlimeMould": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "apply"], [15, 4, 1, "", "approach_food"], [15, 2, 1, "", "element_class"], [15, 3, 1, "", "elements"], [15, 4, 1, "", "get_ranks"], [15, 4, 1, "", "isa"], [15, 3, 1, "", "n_elements"], [15, 2, 1, "", "params"], [15, 4, 1, "", "regester"], [15, 4, 1, "", "regester_map"], [15, 4, 1, "", "transition"]], "pyrimidine.misc.sma.SlimyMaterial": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "apply"], [15, 4, 1, "", "approach_food"], [15, 4, 1, "", "backup"], [15, 4, 1, "", "copy"], [15, 3, 1, "", "elements"], [15, 3, 1, "", "fitness"], [15, 4, 1, "", "init"], [15, 4, 1, "", "isa"], [15, 3, 1, "", "memory"], [15, 3, 1, "", "n_elements"], [15, 2, 1, "", "params"], [15, 4, 1, "", "random_move"], [15, 4, 1, "", "regester"], [15, 4, 1, "", "regester_map"], [15, 4, 1, "", "set_memory"], [15, 3, 1, "", "solution"]], "pyrimidine.misc.ssa": [[15, 1, 1, "", "BaseSparrow"], [15, 1, 1, "", "Producer"], [15, 1, 1, "", "Scrounger"], [15, 1, 1, "", "StandardSparrowSearch"], [15, 5, 1, "", "random"]], "pyrimidine.misc.ssa.BaseSparrow": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "backup"], [15, 4, 1, "", "copy"], [15, 3, 1, "", "fitness"], [15, 4, 1, "", "init"], [15, 3, 1, "", "memory"], [15, 4, 1, "", "move"], [15, 2, 1, "", "params"], [15, 4, 1, "", "set_memory"], [15, 3, 1, "", "solution"]], "pyrimidine.misc.ssa.Producer": [[15, 2, 1, "", "alias"], [15, 2, 1, "", "params"]], "pyrimidine.misc.ssa.Scrounger": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "move"], [15, 2, 1, "", "params"]], "pyrimidine.misc.ssa.StandardSparrowSearch": [[15, 2, 1, "", "element_class"], [15, 4, 1, "", "init"], [15, 2, 1, "", "params"], [15, 4, 1, "", "transition"]], "pyrimidine.multipopulation": [[11, 1, 1, "", "DualPopulation"], [11, 1, 1, "", "HybridPopulation"], [11, 1, 1, "", "MultiPopulation"], [11, 5, 1, "", "random"]], "pyrimidine.multipopulation.DualPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 2, 1, "", "default_size"], [11, 3, 1, "", "elements"], [11, 3, 1, "", "female_fitness"], [11, 3, 1, "", "female_population"], [11, 3, 1, "", "females"], [11, 4, 1, "", "flatten"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "male_fitness"], [11, 3, 1, "", "male_population"], [11, 3, 1, "", "males"], [11, 4, 1, "", "match"], [11, 4, 1, "", "mate"], [11, 4, 1, "", "merge"], [11, 4, 1, "", "mutate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "select"], [11, 4, 1, "", "transition"]], "pyrimidine.multipopulation.HybridPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "flatten"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "migrate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.multipopulation.MultiPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "flatten"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.optimize": [[11, 1, 1, "", "Optimizer"], [11, 5, 1, "", "de_minimize"], [11, 5, 1, "", "ga_minimize"], [11, 5, 1, "", "ga_minimize_1d"]], "pyrimidine.optimize.Optimizer": [[11, 2, 1, "", "Population"], [11, 2, 1, "", "min_max"]], "pyrimidine.population": [[11, 1, 1, "", "AgePopulation"], [11, 1, 1, "", "DualPopulation"], [11, 1, 1, "", "EliminationPopulation"], [11, 1, 1, "", "GamogenesisPopulation"], [11, 1, 1, "", "HOFPopulation"], [11, 1, 1, "", "LocalSearchPopulation"], [11, 1, 1, "", "ModifiedPopulation"], [11, 2, 1, "", "Population"], [11, 1, 1, "", "StandardPopulation"], [11, 5, 1, "", "makeBinaryPopulation"], [11, 5, 1, "", "random"]], "pyrimidine.population.AgePopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "eliminate"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "transition"]], "pyrimidine.population.DualPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "dual"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "transition"]], "pyrimidine.population.EliminationPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "eliminate"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "transition"]], "pyrimidine.population.GamogenesisPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "get_homosex"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.population.HOFPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "best_individual"], [11, 3, 1, "", "elements"], [11, 2, 1, "", "hall_of_fame"], [11, 4, 1, "", "init"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "max_fitness"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "transition"], [11, 4, 1, "", "update_hall_of_fame"]], "pyrimidine.population.LocalSearchPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "transition"]], "pyrimidine.population.ModifiedPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mutate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.population.StandardPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "transition"]], "pyrimidine.pso": [[11, 1, 1, "", "BaseParticle"], [11, 1, 1, "", "DiscreteParticleSwarm"], [11, 1, 1, "", "Particle"], [11, 1, 1, "", "ParticleSwarm"], [11, 5, 1, "", "random"]], "pyrimidine.pso.BaseParticle": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "backup"], [11, 3, 1, "", "best_position"], [11, 4, 1, "", "copy"], [11, 4, 1, "", "decode"], [11, 2, 1, "", "default_size"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 3, 1, "", "fitness"], [11, 4, 1, "", "init"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "memory"], [11, 4, 1, "", "move"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 3, 1, "", "position"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "set_memory"], [11, 3, 1, "", "solution"], [11, 4, 1, "", "update_vilocity"], [11, 3, 1, "", "velocity"]], "pyrimidine.pso.DiscreteParticleSwarm": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "move"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.pso.Particle": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 2, 1, "", "default_size"], [11, 3, 1, "", "direction"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 3, 1, "", "position"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "update_vilocity"], [11, 4, 1, "", "update_vilocity_by_fame"], [11, 3, 1, "", "velocity"]], "pyrimidine.pso.ParticleSwarm": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "backup"], [11, 3, 1, "", "best_fitness"], [11, 2, 1, "", "default_size"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "init"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "move"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "transition"], [11, 4, 1, "", "update_hall_of_fame"]], "pyrimidine.qga": [[11, 1, 1, "", "QuantumPopulation"]], "pyrimidine.qga.QuantumPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "backup"], [11, 2, 1, "", "default_size"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "update_hall_of_fame"]], "pyrimidine.saga": [[11, 1, 1, "", "BaseSelfAdaptiveIndividual"], [11, 1, 1, "", "RankingIndividual"], [11, 1, 1, "", "SSAPopulation"], [11, 1, 1, "", "SelfAdaptiveIndividual"], [11, 5, 1, "", "lim"], [11, 5, 1, "", "random"]], "pyrimidine.saga.BaseSelfAdaptiveIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "desire"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "mate_prob"], [11, 3, 1, "", "mutate_prob"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.saga.RankingIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 2, 1, "", "ranking"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.saga.SSAPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "doom"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "is_crowd"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "match"], [11, 4, 1, "", "mate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "select"], [11, 4, 1, "", "transition"]], "pyrimidine.saga.SelfAdaptiveIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "desire"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mate"], [11, 3, 1, "", "mate_prob"], [11, 4, 1, "", "mutate"], [11, 3, 1, "", "mutate_prob"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 3, 1, "", "trait"]], "pyrimidine.studga": [[11, 1, 1, "", "StudPopulation"], [11, 5, 1, "", "random"]], "pyrimidine.studga.StudPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.utils": [[11, 5, 1, "", "boltzmann_select"], [11, 5, 1, "", "choice"], [11, 5, 1, "", "choice_uniform"], [11, 5, 1, "", "choice_with_fitness"], [11, 5, 1, "", "copy"], [11, 5, 1, "", "hl"], [11, 5, 1, "", "max0"], [11, 5, 1, "", "metropolis_rule"], [11, 5, 1, "", "pattern"], [11, 5, 1, "", "prufer_decode"], [11, 5, 1, "", "randint2"], [11, 5, 1, "", "random"], [11, 5, 1, "", "rotate"], [11, 5, 1, "", "rotations"]]}, "objnames": {"0": ["py", "module", "Python module"], "1": ["py", "class", "Python class"], "2": ["py", "attribute", "Python attribute"], "3": ["py", "property", "Python property"], "4": ["py", "method", "Python method"], "5": ["py", "function", "Python function"], "6": ["py", "exception", "Python exception"]}, "objtypes": {"0": "py:module", "1": "py:class", "2": "py:attribute", "3": "py:property", "4": "py:method", "5": "py:function", "6": "py:exception"}, "terms": {"": [2, 4, 6, 12, 14, 15], "0": [2, 4, 5, 8, 11, 12, 13, 14, 15], "0001": [2, 11, 13, 14], "001": 15, "0078125": 5, "01001101": 11, "01100010011111010100100110111010001110101100011111": 4, "05": 11, "06": 11, "0b100": 11, "0x1065715e0": 11, "1": [0, 2, 5, 6, 10, 11, 12, 13, 14, 15], "10": [2, 4, 7, 11, 13, 14, 15], "100": [2, 4, 11, 12, 13, 14, 15], "11": 7, "111": [2, 4, 5], "13": 15, "134": 11, "141592653589793": 11, "14285714285717": 4, "15": [2, 4], "169": 15, "178": 15, "179": 15, "190": 14, "1942": 11, "1948": 11, "1966": 11, "1973": [2, 11], "1983": 14, "1986": 14, "1989": 14, "1995": 11, "1997": 14, "1998": 11, "1d": 11, "1e": 11, "2": [0, 5, 6, 10, 11, 12, 13, 14, 15], "20": [2, 4, 5, 6, 11, 15], "200": [2, 5, 14], "2001": 11, "2005": [11, 15], "2009": 15, "2010": 15, "2011": 15, "2012": 15, "2013": 15, "2016": 15, "2020": 15, "206": 14, "21": 15, "22": 15, "220": 14, "2232": 15, "2248": 15, "23": 4, "243": 4, "25": [2, 4], "252": 4, "278": 4, "28": 4, "280": 4, "283185307179586": 11, "29": 15, "2n": 11, "3": [0, 2, 7, 10, 11, 12, 13, 15], "300": [12, 13], "302": 4, "315": 8, "32": 14, "350": 8, "353": 15, "36": 11, "37": 11, "373": 15, "4": [0, 10, 11, 12, 13, 14, 15], "4598": 14, "464": 15, "480": 8, "483": 15, "5": [0, 10, 11, 12, 15], "50": [4, 5, 11, 12], "500": 12, "526737168276654": 4, "560": 8, "57142857142856": 4, "589508565206224": 4, "6": [0, 10, 11, 12, 15], "600": 8, "631855694235433": 4, "640": 8, "671": 14, "679": 14, "7": [0, 4, 10, 11, 12, 15], "7142857142857": 4, "71428571428572": 4, "75": [2, 11, 15], "8": [4, 7, 11, 12, 13, 15], "9": [7, 11, 15], "910889654016373": 4, "944664098197542": 4, "95": [4, 15], "99": [2, 14], "A": [1, 6, 11, 12, 15], "And": 11, "As": [6, 11], "But": [1, 11], "For": [1, 4, 6, 11], "If": [1, 2, 5, 6, 8, 11, 15], "In": [2, 4, 5, 6, 11, 15], "It": [1, 2, 4, 6, 7, 11, 15], "No": [6, 11], "One": [1, 4], "The": [1, 2, 3, 4, 5, 6, 9, 11, 13, 14, 15], "Then": [2, 4], "There": [2, 6], "To": [4, 5, 6, 11, 15], "Will": 2, "_": [1, 2, 4], "__class__": 4, "__init__": 4, "__int__": 11, "__lt__": 4, "__main__": 4, "__name__": 4, "__str__": 4, "_cach": 11, "_choromosom": 6, "_chromosom": [4, 6], "_chromosome1": 6, "_chromosome2": 6, "_decod": 11, "_evalu": 4, "_fit": [1, 2, 4, 5, 6, 11], "_hybridpopul": 4, "_individu": [4, 11], "_individual1": 6, "_individual2": 6, "_memori": [5, 11], "_multipopul": 4, "_particl": 2, "_popul": 4, "_prob": 1, "_rate": 1, "a1x": 12, "a1xt": 12, "a2f": 12, "ab": 4, "abstract": 1, "acceler": [2, 15], "acceleration_coeffici": 11, "acceleromet": 8, "access": [8, 11], "accord": 11, "achiev": 6, "aco": [9, 11], "across": 6, "act": 11, "action": [2, 14], "ad": 13, "adapt": [6, 11], "add": [6, 9, 11], "add_cach": 11, "add_memori": [5, 11], "add_subplot": [2, 4, 5], "adher": 2, "adjust": 15, "adopt": 6, "advis": [2, 11], "affect": 11, "after": [2, 4, 5, 11, 15], "after_sett": 11, "ag": 11, "again": 11, "ageindividu": 11, "agepopul": 11, "aim": 1, "al": 15, "alam": 6, "alarm": 15, "algebr": 11, "algebra": [0, 1, 3, 10], "algo": [9, 11, 14], "algorithm": [2, 3, 5, 7, 9, 11, 13, 14, 15], "alia": [0, 10, 11, 13, 14, 15], "all": [1, 2, 11], "allow": [8, 13], "allowfullscreen": 8, "along": 5, "alpha": [12, 15], "alpin": 12, "also": [2, 6, 7, 11], "alwai": [1, 5], "am": 6, "amir": 15, "among": 11, "an": [1, 2, 3, 4, 5, 6, 9, 11, 13, 14, 15], "analysi": 15, "ani": [0, 4, 9, 10, 11], "anneal": [2, 6, 11, 14, 15], "anoth": [11, 14, 15], "ant": [9, 15], "anthor": 11, "api": [0, 2, 6, 10], "append": [1, 2, 4], "appli": [6, 11, 14, 15], "applic": [3, 6, 15], "approach": [11, 15], "approach_food": 15, "approxim": 11, "ar": [1, 6, 11, 13, 15], "arg": [2, 4, 5, 11, 13, 14, 15], "argmax": 11, "argsort": [1, 4, 12], "argument": [0, 2, 9, 10, 11], "arrai": [1, 4, 6, 7, 11, 13], "arraychromosom": 11, "articl": 6, "as_chromosom": 11, "aspir": 2, "assert": 11, "assign": 2, "associ": 6, "astyp": 4, "attenuation_coeffici": 15, "attr": 11, "attr_nam": 11, "attract": 15, "attribut": [0, 2, 6, 10, 11, 14, 15], "attributeerror": 11, "author": [4, 7], "auto": 13, "autoplai": 8, "autoref": 6, "ax": [2, 4, 5], "ax2": 4, "b": [4, 11, 12], "b1": 12, "b2": 12, "ba": [1, 11], "backup": [2, 4, 5, 11, 14, 15], "base": [1, 2, 4, 5, 6, 12, 13, 14, 15], "baseant": 15, "baseantcoloni": 15, "basechromosom": [6, 11], "basecommun": 11, "baseenvioren": 11, "baseenviron": 11, "baseepindividu": 11, "baseestim": 13, "basefirefli": 15, "basegen": 11, "baseindividu": [1, 2, 6, 11, 14, 15], "basemultipopul": [4, 11], "baseparticl": [2, 11, 15], "basepopul": [1, 2, 4, 6, 11, 15], "baseproblem": 12, "baseselfadaptiveindividu": 11, "basesparrow": 15, "basetabusearch": [2, 14], "basi": [12, 15], "basic": [0, 10], "basic_memori": [4, 5, 6, 11], "bat": 15, "becaus": 6, "been": [2, 6, 11], "befor": [0, 10, 15], "begin": 6, "behavior": [5, 6, 11, 15], "behaviour": 11, "beij": 3, "below": 6, "benchmark": [4, 5, 11], "berlin": 15, "best": [1, 2, 4, 5, 6, 11, 14, 15], "best_el": [1, 11, 15], "best_fit": [2, 5, 11], "best_individu": [4, 11, 15], "best_particl": 11, "best_posit": 11, "beta": 15, "better": [2, 15], "between": [4, 6, 11], "bimsa": 3, "bin": [2, 4, 5], "binari": [1, 4, 11], "binarychromosom": [1, 4, 5, 11], "binarygen": 11, "binaryindividu": [1, 11], "biologischen": [2, 11], "blum": 15, "bm": 11, "bo": 15, "boltzmann_select": 11, "bool": [11, 13, 14, 15], "boolean": 6, "bound": 11, "break": 2, "byte": 11, "bytearrai": 11, "c": [4, 11, 12, 14], "c1zt": 12, "c2": 12, "c2g": 12, "cach": [1, 6, 9, 11], "calcul": [1, 11], "call": [1, 2, 6, 11], "can": [1, 2, 4, 5, 6, 7, 11], "capabl": 6, "case": [1, 2, 5, 11], "certain": [11, 14, 15], "chage": 11, "chang": [1, 5, 6, 9, 11, 13], "channel": 12, "check": [4, 5, 7, 11, 14, 15], "cheng": 6, "child": [2, 4, 11], "choic": [2, 11, 12], "choice_uniform": 11, "choice_with_fit": 11, "choos": 11, "choromosom": 11, "chosen": 11, "christian": 15, "chromesom": 11, "chromosom": [2, 4, 6, 7, 14, 15], "ci": 12, "cij": 12, "circlechromosom": [4, 11], "circlegen": 11, "cl": [4, 11, 14, 15], "class": [0, 2, 4, 5, 6, 9, 10, 11, 12, 13, 14, 15], "class_nam": 11, "classic": 1, "classmethod": [4, 11, 13, 15], "clear": [5, 11], "clear_cach": 11, "clear_fit": 11, "clipboard": 8, "clone": [1, 2, 4, 5, 11], "cluster": 11, "cluster_centers_": 13, "cmd": 11, "co": [4, 12], "code": [1, 6, 9, 11], "coef": [2, 12], "coef_": 13, "coefs_": 13, "coerciv": 1, "collect": [1, 4, 11], "collectivemixin": [1, 4, 11], "coloni": [9, 15], "command": [7, 11], "common": 5, "compact": 1, "comparison": [0, 2, 6, 10], "compet": 4, "compete_prob": 4, "competit": [0, 10, 11], "complic": [2, 11], "compos": [6, 9, 11], "compuls": 2, "comput": [1, 4, 5, 6, 7, 9, 11, 14, 15], "compute_acceler": 15, "compute_mass": 15, "concis": 6, "conf": 11, "config": 13, "configur": 13, "consid": [4, 5, 11, 15], "consist": 11, "constant": 4, "contain": [1, 4, 5, 6, 11], "containt": 11, "context": 1, "continu": 15, "control": 8, "conveni": [9, 11], "convert": 11, "cooper": 15, "copi": [1, 2, 4, 11, 14, 15], "copy_x": 13, "core": [1, 4, 11, 14, 15], "corespond": 12, "correct": 9, "correspond": 5, "could": [1, 6, 11], "counter": [4, 11], "cpy": [2, 4], "craft": [2, 11], "creat": [1, 2, 6, 7, 13, 14], "create_model": 13, "critic": 15, "cross": [1, 2, 4, 11, 14, 15], "cross2": 11, "cross_prob": [2, 11], "crossov": [1, 11], "current": [2, 5, 6, 15], "curv": [2, 4], "curvefit": 12, "curvepath": 12, "custom": [0, 10, 11], "d": [2, 4, 11, 12, 14, 15], "danger": 15, "data": [2, 4, 6, 11, 13, 14, 15], "datafram": [4, 6], "de": [1, 2, 5], "de_minim": 11, "deap": 6, "debug": 9, "deco": [1, 4, 5], "decod": [1, 4, 5, 7, 11], "decor": [0, 1, 4, 6, 9, 10, 11], "decoupl": 6, "def": [1, 2, 4, 5, 11], "default": [4, 5, 11, 13], "default_s": [2, 4, 5, 6, 11, 15], "defin": [1, 2, 4, 5, 6, 9, 11, 15], "definit": [2, 6], "demand": 6, "demo": [2, 4, 5], "denot": 6, "deod": 7, "der": [2, 11], "deriv": [2, 11], "descript": 4, "deseri": 1, "design": [0, 2, 6, 7, 10, 11], "desir": 11, "detail": 6, "determin": 15, "develop": [6, 7, 10, 11, 15], "deviat": 4, "dic": 5, "dict": [2, 11, 14], "dictionari": [1, 11], "differ": [1, 2, 7, 11], "differenti": [0, 6, 10, 11], "differentialevolut": [2, 11], "differentialevolution1": 11, "digit_convert": [4, 7], "digitchromosom": 11, "digitgen": 11, "dimens": 2, "direct": [11, 15], "directli": 11, "dirti": 1, "discret": 11, "discreteparticleswarm": 11, "distanc": 15, "distinct": 6, "distribut": 11, "divers": 6, "do": [1, 2, 4, 5], "document": [7, 9], "doe": 1, "domain": [6, 15], "doom": 11, "dose": 5, "dot": 11, "download": [0, 7, 10], "draw": 4, "dual": [1, 11], "dual_prob": 11, "dualpopul": 11, "duplic": 4, "dure": 6, "e": [1, 6, 13, 14, 15], "ea": 1, "each": [2, 4, 5, 6, 11, 13, 15], "earliest": 6, "easi": [2, 6], "eberhart": 11, "echo": 15, "echoloc": 15, "edg": 12, "effect": [5, 6, 11, 13], "effici": 6, "either": 6, "eleg": 4, "element": [4, 6, 11, 14, 15], "element_class": [2, 4, 5, 6, 11, 14, 15], "elif": 4, "elimin": 11, "eliminationpopul": 11, "els": [2, 4, 5, 11], "emit": 15, "empti": 5, "enabl": 6, "enable_metadata_rout": 13, "encapsul": [5, 6], "encod": [1, 4, 6, 11], "encrypt": 8, "enet": 11, "engin": 15, "enhanc": 15, "enough": 6, "entir": 11, "enumer": [2, 4], "env": [2, 4, 5], "environ": 11, "ep": 1, "epoch": 2, "epsilon": 11, "equal": 4, "equal_to": 11, "equaval": 11, "equiv": [1, 4, 11], "equival": [1, 4], "erm": 12, "error": [1, 13], "esp": [1, 11], "essenc": 6, "essenti": 11, "estim": 13, "estimated_param": 13, "et": 15, "evalu": [4, 5, 11], "ever": 11, "evolu": 4, "evolut": [0, 1, 5, 6, 7, 10, 11, 15], "evolutionari": [0, 1, 6, 7, 10, 11, 15], "evolutionprogram": 11, "evolutionsstrategi": 2, "evolutionstrategi": [2, 4, 11], "evolv": [1, 2, 4, 5, 11], "exampl": [0, 1, 2, 5, 6, 9, 10, 11, 12], "excel": 6, "except": [1, 7, 11], "exchang": 4, "execut": [5, 11], "exist": 13, "exmapl": [0, 10], "exp": 12, "explicitli": 4, "explor": 2, "export": 6, "exptect": 11, "ext_c": [2, 14], "extend": [1, 2, 4, 11, 15], "extens": [6, 7], "extern": 2, "extrem": 4, "ezolv": 2, "ezstat": 7, "f": [2, 4, 5, 11, 12, 14, 15], "fa": [1, 11], "facilitylayout": 12, "factor": [2, 11], "fail": 8, "fals": [2, 11, 13], "fame": [11, 15], "fame_s": 11, "far": 6, "featur": 6, "femal": 11, "female_fit": 11, "female_popul": 11, "few": 7, "fg": 15, "field": 6, "fig": [2, 4, 5], "figur": [2, 4, 5], "fill": 2, "find": 15, "fintess": 1, "firefli": 15, "first": [0, 1, 2, 6, 10], "fit": [0, 2, 4, 5, 9, 10, 11, 13, 14, 15], "fit_intercept": 13, "fitness_cach": [4, 5, 6], "fitnessmixin": [1, 6, 11, 14, 15], "fix": 6, "flag": 2, "flatten": 11, "fleme": 11, "flexibl": 2, "float": [4, 11], "float64": 11, "floatchromosom": [2, 4, 11, 15], "floatgen": 11, "floatmatrixchromosom": 11, "flow": [11, 15], "fogel": [6, 11], "folder": 9, "follow": [1, 2, 4, 6, 7, 11], "forc": [11, 14, 15], "form": [6, 11, 15], "formal": [11, 14], "fortin": 6, "found": 6, "foundat": 15, "frame": 6, "framebord": 8, "framework": [0, 7, 10, 11, 15], "fred": 14, "freedom": 2, "frequenc": [11, 15], "frequent": [1, 11], "from": [1, 2, 4, 5, 6, 7, 11, 14, 15], "from_dist": 15, "from_posit": 15, "frommann": [2, 11], "fsm": 11, "fulli": 6, "fun": 12, "func": 11, "function": [1, 5, 6, 9, 11, 12], "function1dapproxim": 12, "further": 6, "futur": [2, 11], "g": [1, 6, 11, 13, 14, 15], "ga": [0, 1, 5, 6, 7, 8, 10, 11, 13, 14, 15], "ga_minim": 11, "ga_minimize_1d": 11, "ga_minimzi": 5, "gaft": 6, "gagnon": 15, "gakmean": 13, "galinearregress": 13, "gama": 6, "game": [0, 10], "gamlpregressor": 13, "gamma": 15, "gamogenesi": 11, "gamogenesispopul": 11, "gandomi": 15, "gelatt": 14, "gender": 11, "genderindividu": 11, "gene": [1, 6, 14], "gener": [1, 2, 4, 5, 8, 11], "genet": [2, 11, 15], "geppi": 6, "get": [0, 1, 2, 4, 9, 10, 11, 14, 15], "get_": 1, "get_al": 1, "get_all_fit": [1, 4], "get_best_el": [1, 11, 15], "get_best_individu": [2, 4, 11, 15], "get_best_particl": 11, "get_best_popul": 11, "get_best_populationspopul": 11, "get_homosex": 11, "get_length": 15, "get_neighbour": [2, 11, 14], "get_rank": [11, 15], "get_worst_": 15, "get_worst_el": [9, 15], "github": [0, 6, 10], "give": [5, 6, 9], "given": [4, 11, 13], "global": [2, 11, 15], "glover": 14, "good": 4, "gplearn": 6, "gravit": 15, "graviti": 15, "gravity_coeffici": 15, "gravitysearch": 15, "greedy_degre": 15, "griewangk": 12, "gsa": 11, "guid": 13, "gyroscop": 8, "h": 15, "ha": [2, 5, 6, 11, 13], "hack": [0, 10], "hall": 11, "hall_of_fam": [4, 5, 11, 15], "handl": [4, 11], "hansen": 12, "happen": 4, "haskel": 6, "have": [2, 4, 6, 11], "heidelberg": 15, "height": 8, "helper": [0, 1, 10, 11], "henc": 2, "here": [1, 2, 4, 5, 11], "hidden_dim": 13, "higher": 4, "highli": 6, "hinterd": 6, "histori": [0, 2, 4, 5, 10], "hl": 11, "hof": [11, 15], "hof_siz": [11, 15], "hofpopul": [1, 4, 5, 11, 15], "holland": 6, "holzboog": [2, 11], "hossein": 15, "how": [6, 13], "howev": [6, 7], "html": 8, "http": 8, "hybrid": [6, 9], "hybridpopul": [4, 11], "hyperparamet": 6, "i": [0, 1, 2, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15], "iannick": 15, "idea": [0, 10], "ident": 11, "ieee": 11, "ifram": 8, "ignor": [1, 13], "ii": 14, "imag": 12, "implement": [1, 2, 4, 6, 7, 9, 11], "import": [2, 4, 5, 7, 11], "improv": 6, "inact": 6, "includ": [2, 6, 7, 11], "incorpor": 2, "increas": [11, 14, 15], "increasingli": 11, "ind": [2, 4], "inde": 2, "index": [0, 4, 11], "individu": [2, 4, 5, 6, 9, 14, 15], "individul": 4, "indiviud": [1, 5, 11], "inertia": 11, "influenc": [1, 6], "inform": [5, 11, 14, 15], "inherit": [1, 2, 11], "init": [1, 2, 4, 11, 13, 14, 15], "initi": [2, 6, 11, 15], "initial_posit": 15, "initt": [2, 14], "input": [13, 15], "insert": 11, "insid": 13, "inspir": [0, 10, 15], "insprit": 6, "instal": [0, 6, 10], "instanc": [1, 11], "instanti": 1, "instead": [1, 13], "institut": 3, "int": [4, 11, 15], "int32": 11, "int64": 11, "int_": 4, "int_c": [2, 14], "integ": [6, 11], "integergen": 11, "integr": 6, "intellig": [1, 5, 15], "intercept_": 13, "intercepts_": 13, "intern": [2, 15], "interpret": 11, "interv": [11, 14, 15], "intervalconvert": 4, "introduc": [4, 5, 15], "introduct": [1, 15], "invalid": 1, "invent": 11, "is_crowd": 11, "isa": [11, 14, 15], "item": [4, 11], "iter": [2, 4, 5, 6, 9, 15], "iterativemixin": [1, 9], "its": [6, 15], "itself": [5, 6], "j": [2, 4, 11, 12, 14], "jiankai": 15, "john": 11, "jouni": 11, "journal": 15, "jr": 14, "jrand": 2, "judg": 11, "just": [4, 11], "k": [1, 2, 4, 11, 13, 14, 15], "kantorovich": 12, "katoch": 6, "kei": [11, 14, 15], "kennedi": 11, "kenneth": 11, "keyword": 11, "khatib": 11, "kide": 6, "kind": [6, 11], "kirkpatrick": [6, 14], "kmean": [12, 13], "knapsack": [1, 5, 12], "known": 4, "kwarg": [2, 4, 5, 11, 13, 14, 15], "kwpnpcnutci": 8, "l": [11, 15], "label": 6, "lack": 6, "laguna": 14, "lambda": [2, 4, 5, 11, 12], "lambda_": [2, 4, 11], "lampinen": 11, "languag": 6, "last": 11, "latest": 7, "law": 15, "lb": [11, 12], "lead": 6, "learn": [1, 4, 6, 11], "learning_factor": 11, "learning_r": 1, "least": 11, "left": 4, "legend": [4, 5], "len": [2, 4, 11], "length": 11, "let": 4, "level": 1, "librari": 6, "life": 15, "life_span": 11, "like": [5, 11], "lim": 11, "limit": [6, 9], "lin_comb": 12, "line": 4, "linear": 13, "linear_model": 11, "linear_regress": 11, "linearregress": 13, "linux": 7, "list": [6, 11], "listchromosom": 11, "listen": 15, "liter": 11, "literatur": 6, "littl": 4, "lloyd": 13, "load": 1, "loc": 4, "local": [0, 1, 6, 10, 11], "local_max_it": 15, "local_search": [1, 11], "localsearchpopul": [2, 11], "locat": 15, "logbook": 6, "logpdf": 12, "look": [2, 4], "loop": [1, 11], "loud": 15, "love": 11, "lower": 4, "lower_bound": 11, "lsq": 12, "luniv": 15, "lwc2v28kzga": 8, "m": [4, 11, 12, 14, 15], "machin": 1, "mai": 11, "main": 11, "mainli": [1, 2, 5, 6, 11], "make": [3, 4, 5, 6, 11], "makebinaryindividu": 11, "makebinarypopul": 11, "makeindividu": 11, "male": 11, "male_fit": 11, "male_popul": 11, "manag": 11, "manuel": 14, "map": 11, "map_": 11, "mapps": 11, "mapsto": 11, "markov": 11, "match": 11, "mate": [1, 2, 4, 11], "mate_prob": [4, 11, 15], "mate_with": 11, "math": 5, "mathemat": [1, 3, 6], "matplotlib": [2, 4, 5, 7], "matrix": 11, "matrixchromosom": 11, "matur": 6, "max": [4, 11, 12], "max0": 11, "max_fit": [4, 11], "max_it": [2, 4, 5, 9, 11, 13, 14, 15], "max_repeat": [4, 11], "max_t": 4, "max_veloc": 11, "maxim": 1, "maximum": [1, 4, 11, 15], "mayb": 11, "mean": [1, 4, 5, 11, 13], "mean_fit": [4, 5], "meanwhil": 11, "measur": [4, 11], "measure_result": [4, 11], "mechan": 13, "media": 8, "meet": 6, "memori": [2, 6, 11, 14, 15], "mere": 6, "merg": 11, "meta": [1, 6, 13], "metaarrai": [1, 11], "metaclass": [0, 2, 4, 6, 10, 11], "metacontain": [1, 2, 4, 6, 11], "metacontainor": 11, "metadata": 13, "metadata_rout": 13, "metaheurist": 15, "metahighcontain": [4, 6, 11], "metalist": 11, "metasingl": 11, "metatupl": 11, "method": [0, 2, 4, 5, 6, 7, 9, 10, 11, 13, 14, 15], "method_cach": 11, "metropoli": [2, 11], "metropolis_rul": [2, 11], "michalewiez": 12, "migrat": [1, 4, 11], "migrate_prob": 11, "min": [4, 11, 12], "min_": 5, "min_max": 11, "mini": 11, "minim": [4, 11], "minspanningtre": 12, "mirjalili": 15, "misc": [0, 9, 10, 11], "mix": [4, 11], "mixedindividu": [4, 6, 11], "mixin": [0, 2, 6, 10, 11], "mixml": 12, "mle": 12, "mlp": [12, 13], "mlpregressor": 13, "mode": 12, "model": 13, "modif": 6, "modifiedpopul": 11, "monobinaryindividu": 4, "monoindividu": [2, 4, 11], "more": [2, 5, 6, 11], "most": [1, 2], "mould": 15, "move": [2, 9, 11, 14, 15], "move_flag": 15, "move_proba": 15, "move_r": 15, "move_toward": 11, "mp": 4, "mp4": 8, "mu": [2, 4, 11, 12], "mu_c": 12, "multi": [4, 6, 11, 12], "multiindividu": [4, 11], "multiknapsack": 12, "multipopul": [0, 1, 10], "multipopulationmixin": 11, "multivari": 11, "must": 11, "mutat": [1, 2, 4, 11, 14, 15], "mutate_prob": [4, 11, 15], "mutate_prob_lb": 11, "mutate_prob_ub": 11, "mute": 11, "my": 4, "mydata": [4, 5], "myindividu": [2, 4, 5, 11], "myparticleswarm": 2, "mypop": [4, 5], "mypopul": [4, 5, 11], "n": [2, 4, 11, 12, 15], "n_": 1, "n_ant": 15, "n_bag": [4, 5, 12], "n_bat": 15, "n_chromosom": [1, 11, 14, 15], "n_cluster": 13, "n_compon": 12, "n_elder": 11, "n_element": [11, 14, 15], "n_epoch": [2, 14], "n_i": 4, "n_individu": [4, 11, 13, 15], "n_init": 13, "n_iter": 9, "n_job": 13, "n_layer": 13, "n_local_it": 11, "n_observ": 12, "n_particl": [11, 15], "n_popul": 11, "n_sel": 11, "n_step": 15, "n_string": 11, "nach": [2, 11], "name": [1, 4, 6, 7, 11, 13, 14, 15], "namli": 6, "natur": [4, 6, 11, 15], "naturalchromosom": 11, "naturalgen": 11, "ndarrai": [11, 12], "ndim": 4, "neat": 6, "need": [0, 2, 4, 5, 7, 10], "neighbour": [11, 14], "netw": 11, "network": 13, "neural": [11, 13], "neural_network": 11, "neuroevolut": 6, "new": [4, 6, 9, 11, 14, 15], "nezamabadi": 15, "ni": [4, 11], "niazi": 15, "nmf": 12, "node": [11, 12], "none": [2, 4, 5, 11, 12, 13, 14, 15], "normal": 11, "notat": 9, "note": [11, 13], "notimplementederror": [2, 11], "novel": [1, 2, 4, 11, 15], "now": [2, 6], "np": [2, 4, 11], "number": [1, 2, 4, 6, 11, 14, 15], "numer": [1, 6], "numpi": [4, 6, 7, 9, 11], "numpyarraychromosom": 11, "obj": 11, "object": [1, 4, 6, 11, 13, 14, 15], "observ": 9, "obstacl": 15, "occur": 11, "offer": [2, 7], "offspr": [2, 4, 11], "olson": 6, "one": [1, 2, 4, 5, 6, 11, 14, 15], "ones": 11, "onli": [1, 2, 5, 6, 7, 11, 13, 14], "oop": 6, "oper": [6, 11], "opt": [6, 11], "optim": [0, 2, 4, 6, 7, 9, 10, 13, 14, 15], "optimierung": [2, 11], "option": [11, 13, 14, 15], "order": [4, 11], "ordinari": 4, "orient": 6, "origin": [1, 8, 11, 13], "other": [2, 4, 5, 6, 11, 13, 14, 15], "otherwis": [5, 6, 11, 13], "output": [5, 11, 13, 15], "overrid": [1, 2, 11], "overriden": 4, "own": [1, 2, 4, 7], "p": [4, 11, 12, 14, 15], "packag": [2, 6, 7, 10], "pag": 15, "page": [0, 10], "paint": 12, "pair": 11, "panda": 7, "paper": 4, "paral": 9, "parallel": [9, 11], "param": [0, 2, 4, 10, 11, 12, 14, 15], "paramet": [0, 2, 10, 11, 13, 14, 15], "paramtyp": [1, 11], "parent": 11, "part": [5, 6, 11, 14], "parti": 6, "partial": 6, "partic": 2, "particl": [2, 6, 7, 11, 15], "particleswarm": [2, 11], "particular": 11, "particularli": [6, 15], "pass": [2, 4, 11, 13], "path": 15, "pattern": [6, 9, 11], "pd": 15, "pdf": [7, 12], "perceiv": 15, "period": 11, "periodicgen": 11, "permut": 11, "permutationchromosom": 11, "perspect": 6, "peter": 11, "phantom": [2, 11, 14, 15], "phantomindividu": [2, 11, 14], "philosophi": [6, 10], "physic": 15, "pictur": [0, 10], "pieter": 6, "pip": [6, 7], "pipelin": 13, "plai": [4, 8], "platform": 7, "player": 4, "pleas": [6, 11, 13], "plot": [2, 4, 5, 6], "plt": [2, 4, 5], "point": [11, 12], "polyindividu": [4, 11, 15], "pop": [1, 2, 4, 11, 13], "popul": [2, 6, 9, 13, 15], "popular": 6, "population_s": 11, "populationmixin": [1, 2, 4, 9, 11, 15], "posit": [2, 11, 13, 15], "positivechromosom": 11, "possess": 6, "possibl": [1, 4], "pour": 15, "pp": [11, 15], "practic": [2, 11], "pre": 11, "preced": 11, "prei": 15, "present": [2, 4], "press": 15, "previou": [2, 11], "price": 11, "primarili": 6, "principl": [0, 6, 10], "print": [4, 5, 11], "prinzipien": [2, 11], "prob": 11, "proba": 11, "probabilitychromosom": 11, "probabl": [1, 11], "problem": [1, 5, 6, 11, 12, 15], "proc": 11, "process": 11, "produc": [5, 15], "program": [1, 6, 11], "prohibit": 11, "properti": [1, 4, 5, 11, 12, 14, 15], "provid": [2, 6, 11, 13], "prufer": 11, "prufer_decod": 11, "pseudo": 1, "pso": [1, 2], "puls": 15, "pulse_r": 15, "purpos": 4, "py": [2, 6, 9], "pypi": [6, 7], "pyplot": [2, 4, 5], "pypy3": 7, "pyrimidin": [4, 5], "pysr": 6, "python": [2, 4, 6, 7, 11], "python3": [4, 5], "q": 4, "qa": 11, "quantum": [0, 6, 10, 11], "quantumchromosom": 11, "quantumpopul": 11, "quick": 2, "r": [4, 11], "r2": 15, "radtk": 6, "rainer": 11, "rais": [2, 11, 13], "rand": 15, "randint": [2, 4, 11], "randint2": [2, 4, 11], "random": [1, 2, 4, 5, 11, 12, 14, 15], "random_mov": 15, "random_neighbour": [2, 11], "random_st": 13, "random_walk": 11, "randomli": [1, 4, 5, 11], "randomwalk": 14, "rang": [2, 4], "rank": [4, 11, 15], "rankingindividu": 11, "rap": 3, "rashedi": 15, "rastrigrin": 12, "rate": 11, "raw": 8, "re": [5, 6, 11], "read": [5, 6], "real": [1, 6, 7, 11], "recent": 15, "rechenberg": [2, 11], "recommend": [1, 4, 6, 7], "record": [2, 5, 11], "redefin": 2, "reduc": 6, "ref": [2, 11, 14, 15], "refer": [2, 6, 11, 14, 15], "regard": [1, 4, 6, 11], "regest": [11, 14, 15], "regester_map": [11, 14, 15], "regestererror": 11, "regress": [6, 13], "releas": [0, 10], "release_pheromon": 15, "relev": [13, 15], "remark": 11, "remov": [1, 2, 4, 11], "repeat": [1, 4, 11], "repetit": 4, "replac": 2, "replic": [1, 11], "report": 15, "repres": [1, 2, 6, 11, 15], "request": 13, "requir": [0, 2, 4, 10, 11], "research": 2, "reset": 15, "reset_r": 15, "respect": 6, "respons": 6, "result": [4, 5, 6, 11], "retain": 13, "return": [2, 4, 5, 11, 13, 14, 15], "review": [6, 15], "revolut": 11, "rho": 15, "rich": 6, "right": 4, "rnn": 12, "rosenbrock": [2, 4, 12], "rotat": 11, "rout": 13, "rule": [2, 11, 14, 15], "run": [2, 7], "sa": [2, 14], "same": 11, "sampl": 11, "sample_weight": 13, "sapopul": 2, "saryazdi": 15, "save": [1, 4, 5], "scalabl": 6, "scale": [11, 15], "scale_fam": 11, "scenario": 6, "schaffer": 12, "scheme": 6, "scienc": [3, 15], "scikit": [6, 13], "scipi": 7, "scissor": 4, "scope": 11, "score": [4, 13], "scrounger": 15, "sd": 15, "search": [0, 1, 6, 10, 11, 14, 15], "section": [1, 2], "sediment": 15, "see": [1, 2, 4, 6, 13], "seen": 11, "seep": 11, "select": [1, 4, 11], "select_best_individu": [2, 4, 11], "self": [1, 2, 4, 5, 11, 12, 13], "selfadaptiveindividu": 11, "semicirclegen": 11, "sequanc": 4, "sequenc": [4, 11], "serial": 1, "seriou": 6, "serv": 6, "set": [1, 2, 4, 5, 11], "set_": 1, "set_cach": 11, "set_config": 13, "set_fit": [4, 11], "set_fit_request": 13, "set_memori": [11, 14, 15], "set_param": [2, 4, 11], "set_score_request": 13, "set_siz": 11, "set_titl": [2, 4, 5], "set_xlabel": [2, 4, 5], "set_ylabel": [2, 4, 5], "sever": [1, 4], "she": 15, "shena": 15, "short": 1, "shortag": 6, "shortestpath": 12, "should": [4, 6, 11, 13], "show": [2, 4, 5], "side": [5, 6, 11], "side_effect": [6, 11], "sigma": [11, 14], "significantli": 6, "simon": 6, "simpl": [1, 11], "simpletabusearch": 14, "simul": [1, 2, 6, 11, 14, 15], "simulated_ann": 11, "simulatedann": [2, 14], "sin": 12, "sinc": 2, "singl": [2, 6, 11], "size": [2, 4, 11, 12], "skelton": 2, "skeuomorph": 1, "sklearn": 13, "sklearn_api": 6, "slime": 15, "slimemould": 15, "slimymateri": 15, "sma": 11, "so": [4, 5, 6], "softwar": 6, "solut": [1, 2, 4, 5, 6, 7, 9, 11, 14, 15], "solv": [8, 9, 11, 15], "some": [1, 4, 6, 9, 11, 13], "song": 3, "sort": [1, 2, 12], "sourc": 6, "sp": 4, "space": [11, 15], "sparrow": 15, "spcical": 12, "special": [2, 4, 11], "specif": [2, 11], "specifi": [1, 6], "speed": 5, "springer": 15, "sqrt": 11, "src": 8, "ssa": 11, "ssapopul": 11, "st": 15, "stachost": 11, "stand": 7, "standard": [1, 2, 4, 6, 11, 15], "standardfirefli": 15, "standardpopul": [1, 4, 5, 11], "standardsparrowsearch": 15, "starndard": 15, "start": [0, 1, 10], "stat": [2, 4, 5], "state": [11, 14, 15], "statement": [0, 2, 4, 10], "static": 12, "statist": [4, 7], "std": 1, "std_fit": [1, 4], "step": [4, 5, 11, 15], "stochast": 15, "stochasticmatrixchromosom": 11, "stone": 4, "store": [2, 5, 6, 11, 14, 15], "storn": 11, "str": [11, 13], "strategi": [0, 10, 11, 15], "strictli": 2, "string": 11, "structur": 6, "stud": 11, "studpopul": 11, "style": [2, 4, 6, 11], "sub": [11, 13], "subclass": [1, 2, 4, 11], "suffici": 6, "suit": 2, "sum": [4, 11], "sum_": [4, 12], "sum_c": 12, "sum_i": 12, "sum_ij": 12, "sum_j": 12, "supasil": 6, "super": [1, 2, 4, 5, 11], "suppos": [2, 5], "suppress": 11, "sure": [4, 11], "surround": 11, "swarm": [1, 2, 6, 7, 11, 15], "symbol": 6, "system": [1, 2, 6, 11], "sz": 11, "t": [2, 4, 11, 12, 14, 15], "t_i": 4, "tabu": 14, "tabu_list": [2, 14], "tabu_s": [2, 14], "tabu_search": 11, "take": [2, 11], "tan": 12, "task": [1, 4], "techniqu": 5, "technisch": [2, 11], "tediou": 6, "temperatur": [2, 11, 14], "termin": 2, "termt": [2, 14], "test": [0, 2, 9, 10], "test_individu": 2, "than": 15, "thei": [2, 6], "them": [1, 4, 11], "thi": [2, 5, 6, 11, 13, 14, 15], "think": 4, "third": 6, "three": 2, "threshold": 4, "through": 4, "ti": [4, 11], "time": 11, "tobinari": 11, "toc": [3, 4, 5], "toimag": 12, "tol": 13, "tool": 6, "tourn_siz": [11, 15], "tournament": 11, "toward": 11, "tpot": 6, "tradit": 4, "trait": 11, "transform": [4, 11], "transit": [1, 2, 4, 11, 14, 15], "translat": 11, "tree": 11, "trend": 15, "trick": [0, 10], "true": [2, 4, 5, 11, 13, 14, 15], "truncat": 11, "tsp": 8, "tupl": [6, 11], "tutori": [0, 10], "twinx": 4, "two": [2, 4, 5, 6, 11], "type": [0, 1, 2, 4, 6, 10, 11, 13, 14, 15], "type_": [4, 5, 11], "typic": 6, "u": [6, 7, 11], "ub": [11, 12], "uchromosom": 4, "ufunc": 12, "ultrason": 15, "unavalibleattributeerror": 11, "unchang": 13, "uncorrect": 5, "under": 1, "undergon": 6, "underli": 6, "understand": 6, "unextens": 6, "unifrom": 11, "unit": [1, 11], "unitfloatchromosom": 11, "unitfloatgen": 11, "unitintervalconvert": 4, "univers": [0, 10], "unix": 7, "unknownsizeerror": 11, "unlik": [6, 11], "unselect": 4, "up": [5, 11], "updat": [4, 5, 9, 11, 13, 15], "update_hall_of_fam": [4, 5, 11], "update_pheromon": 15, "update_tabu_list": [2, 14], "update_viloc": [11, 15], "update_vilocity_by_fam": 11, "upload": 6, "upper": [4, 11], "upper_bound": 11, "url": 8, "us": [1, 2, 5, 6, 7, 9, 11, 13, 15], "usag": 4, "user": [1, 4, 7, 11, 13], "userstr": 11, "usr": [2, 4, 5], "usual": 4, "usual_side_effect": 11, "util": [1, 2, 4, 6, 11, 13], "v": [1, 11], "v1": [0, 10], "valid": [1, 11], "valu": [2, 11, 14, 15], "vari": 11, "variabl": [11, 12, 15], "varianc": 11, "variant": 11, "varieti": 6, "variou": 6, "vb": 15, "vc": 15, "vecchi": 14, "vectorchromosom": 11, "veloc": [2, 11, 15], "verbos": [4, 13], "veri": 6, "versatil": [6, 7], "version": [1, 2, 7, 9, 13], "video": [0, 10], "view": [1, 6], "virtual": 15, "visual": [6, 7], "volatil": 15, "w": [12, 14], "wa": [14, 15], "wael": 11, "wai": 9, "walk": 14, "wang": 6, "want": [1, 5], "warm_start": 13, "we": [2, 4, 5, 6, 11], "weight": 12, "well": [1, 4, 6], "what": [1, 4, 11], "when": 11, "where": [2, 4, 6, 9, 11, 12, 14, 15], "whether": [11, 14, 15], "which": [1, 6, 7, 11], "while": [1, 2, 4, 11, 15], "whitespac": 11, "who": 15, "whole": 11, "whose": [1, 11], "why": [0, 10], "wi": 12, "wide": [6, 7], "width": 8, "wij": 12, "william": 3, "window": 7, "winner": 4, "within": [2, 6], "without": [4, 11], "work": [5, 13], "worst": [11, 15], "worst_ant": 15, "worst_el": [11, 15], "worst_individu": [11, 15], "worst_popul": 11, "would": 1, "wrap": 1, "wrapper": 11, "write": 8, "x": [4, 5, 11, 12, 13, 14, 15], "x0": 2, "x1": [2, 11], "x2": [2, 11], "x_1": 5, "x_2": 5, "xbest": 15, "xi": [11, 12], "xij": 12, "xin": 15, "xlim": 11, "xuea": 15, "xx": 2, "y": [4, 11, 12, 13], "yang": 15, "yet": 2, "you": [1, 2, 5, 6, 11, 13], "your": [2, 7, 11], "yourdata": [4, 5], "yourindividu": [4, 5], "yourpop": [4, 5], "yourpopul": [4, 5], "youtu": 8, "yt": 12, "zero": [4, 11], "zip": [2, 4, 11], "zt": 12}, "titles": ["Welcome to pyrimidine\u2019s world of genetic algorithm", "API Design", "Customization", "Developers", "Examples and Comparison of Algorithms", "Helpers", "pyrimidine: a universal framework for genetic algorithm", "Installation and Getting Started", "Misc", "Release History", "Welcome to pyrimidine\u2019s world of genetic algorithm", "pyrimidine package", "pyrimidine.benchmarks subpackage", "pyrimidine.learn subpackage", "pyrimidine.local_search subpackage", "pyrimidine.misc subpackage"], "titleterms": {"": [0, 10], "1": 4, "2": 4, "3": 4, "4": 4, "5": [4, 9], "6": [4, 9], "7": 9, "A": 4, "about": [0, 1, 10], "aco": 15, "algebra": 6, "algorithm": [0, 1, 4, 6, 10], "alia": 1, "anoth": 4, "api": 1, "approxim": 12, "argument": 1, "attribut": 1, "ba": 15, "base": 11, "basic": 1, "befor": 9, "benchmark": 12, "cach": 5, "chromosom": [1, 11], "class": 1, "cluster": [12, 13], "code": 4, "commun": 1, "comparison": 4, "content": 10, "creat": 4, "custom": 2, "de": 11, "de_minim": 5, "deco": 11, "decor": 5, "design": 1, "develop": [0, 3], "differenti": 2, "document": 0, "download": 6, "e": 11, "effect": 1, "element": 1, "environ": 1, "ep": 11, "error": 11, "evolut": [2, 4], "evolutionari": 2, "exampl": 4, "exmapl": 4, "fa": 15, "first": 7, "fit": [1, 6, 12], "framework": 6, "ga": [2, 4], "ga_minim": 5, "game": 4, "gene": 11, "genet": [0, 1, 6, 10], "get": 7, "gsa": 15, "hack": 2, "helper": 5, "histori": 9, "hybrid": 4, "idea": 6, "indic": [0, 10], "individu": [1, 11], "inspir": 6, "instal": 7, "iter": 1, "knapsack": 4, "learn": 13, "like": 1, "linear_model": 12, "linear_regress": 13, "list": 1, "local": 2, "local_search": 14, "matrix": 12, "memori": 5, "meta": 11, "metaclass": 1, "method": 1, "misc": [8, 15], "mixin": 1, "model": 1, "modul": [0, 1, 10, 11, 12, 13, 14, 15], "multi": 1, "multipopul": [4, 11], "need": 6, "neural_network": [12, 13], "oper": 1, "optim": [5, 11, 12], "other": [1, 12], "overview": [0, 10], "packag": 11, "param": 1, "paramet": 1, "philosophi": 3, "pictur": 8, "popul": [1, 4, 11], "principl": 2, "problem": 4, "pso": 11, "pure": 1, "pyrimidin": [0, 6, 7, 10, 11, 12, 13, 14, 15], "qga": 11, "quantum": 4, "quantumchromosom": 4, "random_walk": 14, "releas": 9, "requir": 7, "saga": 11, "search": 2, "side": 1, "side_effect": 5, "simpl": 4, "simulated_ann": 14, "sma": 15, "sourc": 4, "special": 12, "ssa": 15, "start": 7, "statement": 6, "strategi": [2, 4], "studga": 11, "subpackag": [11, 12, 13, 14, 15], "tabu": 2, "tabu_search": 14, "test": 7, "trick": 2, "tutori": 8, "univers": 6, "us": 4, "v1": 9, "video": 8, "visual": 4, "welcom": [0, 10], "why": 6, "world": [0, 10]}})
\ No newline at end of file
+Search.setIndex({"alltitles": {"A simple example \u2014 Knapsack problem": [[4, "a-simple-example-knapsack-problem"]], "API Design": [[1, "api-design"]], "About": [[0, null], [10, null]], "About elements(individuals in a population or populations in a multi-population/community)": [[1, "about-elements-individuals-in-a-population-or-populations-in-a-multi-population-community"]], "About fitness": [[1, "about-fitness"]], "Another Problem": [[4, "another-problem"]], "Arguments/Parameters/Attributions": [[1, "arguments-parameters-attributions"]], "Basic Classes": [[1, "basic-classes"]], "Basic operation": [[1, "basic-operation"]], "Cache": [[5, "cache"]], "Chromosomes": [[1, "chromosomes"]], "Codes": [[4, "codes"]], "Comparison of Algorithms": [[4, "comparison-of-algorithms"]], "Contents": [[10, null]], "Create quantum GA": [[4, "create-quantum-ga"]], "Customization": [[2, "customization"]], "Customization Tricks": [[2, "customization-tricks"]], "Decorators": [[5, "decorators"]], "Developers": [[0, null], [3, "developers"], [3, "id1"]], "Differential Evolution": [[2, "differential-evolution"]], "Document": [[0, null]], "Download": [[6, "download"]], "Environment": [[1, "environment"]], "Evolution Strategy": [[2, "evolution-strategy"]], "Evolutionary Strategy": [[2, "evolutionary-strategy"]], "Example 1": [[4, "example-1"]], "Example 2": [[4, "example-2"]], "Example 3 \u2014 Evolution Strategy": [[4, "example-3-evolution-strategy"]], "Example 4 \u2014 Quantum GA": [[4, "example-4-quantum-ga"]], "Example 5 \u2014 MultiPopulation": [[4, "example-5-multipopulation"]], "Examples and Comparison of Algorithms": [[4, "examples-and-comparison-of-algorithms"]], "Exmaple 6 \u2014 Game": [[4, "exmaple-6-game"]], "First test": [[7, "first-test"]], "Fitness": [[6, "fitness"]], "Fitness models": [[1, "fitness-models"]], "GA with local search": [[2, "ga-with-local-search"]], "Genetic operation": [[1, "genetic-operation"]], "Hacking": [[2, "hacking"]], "Helpers": [[5, "helpers"]], "Hybrid-population": [[4, "hybrid-population"]], "Idea of algebra-inspired": [[6, "idea-of-algebra-inspired"]], "Indices": [[0, "indices"], [10, "indices"]], "Individuals": [[1, "individuals"]], "Install pyrimidine": [[7, "install-pyrimidine"]], "Installation and Getting Started": [[7, "installation-and-getting-started"]], "Iterative models/algorithms": [[1, "iterative-models-algorithms"]], "List-like operation": [[1, "list-like-operation"]], "Local Search": [[2, "local-search"]], "Memory": [[5, "memory"]], "Metaclasses": [[1, "metaclasses"]], "Methods": [[1, "methods"]], "Misc": [[8, "misc"]], "Mixin Classes": [[1, "mixin-classes"]], "Modules": [[1, "modules"]], "Modules Overview": [[0, "modules-overview"], [10, "modules-overview"]], "Multi-populations": [[1, "multi-populations"]], "Optimization": [[5, "optimization"]], "Optimizer": [[5, "optimizer"]], "Others": [[1, "others"]], "Philosophy": [[3, "philosophy"]], "Pictures": [[8, "pictures"]], "Population models": [[1, "population-models"]], "Populations": [[1, "populations"]], "Principle": [[2, "principle"]], "Release History": [[9, "release-history"]], "Requirements": [[7, "requirements"]], "Side-effect and pure": [[1, "side-effect-and-pure"]], "Side_effect": [[5, "side-effect"]], "Source code": [[4, "source-code"]], "Statement of need": [[6, "statement-of-need"]], "Subpackages": [[11, null]], "Tabu Searching": [[2, "tabu-searching"]], "Tutorial": [[8, "tutorial"]], "Videos": [[8, "videos"]], "Visualization": [[4, "visualization"]], "Visualization and comparison": [[4, "visualization-and-comparison"]], "Welcome to pyrimidine\u2019s world of genetic algorithm": [[0, "welcome-to-pyrimidine-s-world-of-genetic-algorithm"], [10, "welcome-to-pyrimidine-s-world-of-genetic-algorithm"]], "Why": [[6, "why"]], "before v1.5": [[9, "before-v1-5"]], "de_minimize": [[5, "de-minimize"]], "ga_minimize": [[5, "ga-minimize"]], "params/alias": [[1, "params-alias"]], "pyrimidine package": [[11, "pyrimidine-package"]], "pyrimidine.base module": [[11, "module-pyrimidine.base"]], "pyrimidine.benchmarks subpackage": [[12, "pyrimidine-benchmarks-subpackage"]], "pyrimidine.benchmarks.approximation module": [[12, "module-pyrimidine.benchmarks.approximation"]], "pyrimidine.benchmarks.cluster module": [[12, "module-pyrimidine.benchmarks.cluster"]], "pyrimidine.benchmarks.fitting module": [[12, "module-pyrimidine.benchmarks.fitting"]], "pyrimidine.benchmarks.linear_model module": [[12, "module-pyrimidine.benchmarks.linear_model"]], "pyrimidine.benchmarks.matrix module": [[12, "module-pyrimidine.benchmarks.matrix"]], "pyrimidine.benchmarks.neural_network module": [[12, "module-pyrimidine.benchmarks.neural_network"]], "pyrimidine.benchmarks.optimization module": [[12, "module-pyrimidine.benchmarks.optimization"]], "pyrimidine.benchmarks.others module": [[12, "module-pyrimidine.benchmarks.others"]], "pyrimidine.benchmarks.special module": [[12, "module-pyrimidine.benchmarks.special"]], "pyrimidine.chromosome module": [[11, "module-pyrimidine.chromosome"]], "pyrimidine.de module": [[11, "module-pyrimidine.de"]], "pyrimidine.deco module": [[11, "module-pyrimidine.deco"]], "pyrimidine.ep module": [[11, "module-pyrimidine.ep"]], "pyrimidine.errors module": [[11, "module-pyrimidine.errors"]], "pyrimidine.es module": [[11, "module-pyrimidine.es"]], "pyrimidine.gene module": [[11, "module-pyrimidine.gene"]], "pyrimidine.individual module": [[11, "module-pyrimidine.individual"]], "pyrimidine.learn subpackage": [[13, "pyrimidine-learn-subpackage"]], "pyrimidine.learn.cluster module": [[13, "module-pyrimidine.learn.cluster"]], "pyrimidine.learn.linear_regression module": [[13, "module-pyrimidine.learn.linear_regression"]], "pyrimidine.learn.neural_network module": [[13, "module-pyrimidine.learn.neural_network"]], "pyrimidine.local_search subpackage": [[14, "pyrimidine-local-search-subpackage"]], "pyrimidine.local_search.random_walk module": [[14, "module-pyrimidine.local_search.random_walk"]], "pyrimidine.local_search.simulated_annealing module": [[14, "module-pyrimidine.local_search.simulated_annealing"]], "pyrimidine.local_search.tabu_search module": [[14, "module-pyrimidine.local_search.tabu_search"]], "pyrimidine.meta module": [[11, "module-pyrimidine.meta"]], "pyrimidine.misc subpackage": [[15, "pyrimidine-misc-subpackage"]], "pyrimidine.misc.aco module": [[15, "module-pyrimidine.misc.aco"]], "pyrimidine.misc.ba module": [[15, "module-pyrimidine.misc.ba"]], "pyrimidine.misc.fa module": [[15, "module-pyrimidine.misc.fa"]], "pyrimidine.misc.gsa module": [[15, "module-pyrimidine.misc.gsa"]], "pyrimidine.misc.sma module": [[15, "module-pyrimidine.misc.sma"]], "pyrimidine.misc.ssa module": [[15, "module-pyrimidine.misc.ssa"]], "pyrimidine.multipopulation module": [[11, "module-pyrimidine.multipopulation"]], "pyrimidine.optimize module": [[11, "module-pyrimidine.optimize"]], "pyrimidine.population module": [[11, "module-pyrimidine.population"]], "pyrimidine.pso module": [[11, "module-pyrimidine.pso"]], "pyrimidine.qga module": [[11, "module-pyrimidine.qga"]], "pyrimidine.saga module": [[11, "module-pyrimidine.saga"]], "pyrimidine.studga module": [[11, "module-pyrimidine.studga"]], "pyrimidine: a universal framework for genetic algorithm": [[6, "pyrimidine-a-universal-framework-for-genetic-algorithm"]], "use QuantumChromosome": [[4, "use-quantumchromosome"]], "v1.5": [[9, "v1-5"]], "v1.6": [[9, "v1-6"]], "v1.7": [[9, "v1-7"]]}, "docnames": ["index", "source/API Design", "source/Customization", "source/Developers", "source/Examples", "source/Helpers", "source/Home", "source/Install", "source/Media", "source/Release History", "source/index", "source/pyrimidine", "source/pyrimidine.benchmarks", "source/pyrimidine.learn", "source/pyrimidine.local_search", "source/pyrimidine.misc"], "envversion": {"sphinx": 61, "sphinx.domains.c": 3, "sphinx.domains.changeset": 1, "sphinx.domains.citation": 1, "sphinx.domains.cpp": 9, "sphinx.domains.index": 1, "sphinx.domains.javascript": 3, "sphinx.domains.math": 2, "sphinx.domains.python": 4, "sphinx.domains.rst": 2, "sphinx.domains.std": 2, "sphinx.ext.intersphinx": 1, "sphinx.ext.todo": 2}, "filenames": ["index.rst", "source/API Design.md", "source/Customization.md", "source/Developers.md", "source/Examples.md", "source/Helpers.md", "source/Home.md", "source/Install.md", "source/Media.md", "source/Release History.md", "source/index.rst", "source/pyrimidine.rst", "source/pyrimidine.benchmarks.rst", "source/pyrimidine.learn.rst", "source/pyrimidine.local_search.rst", "source/pyrimidine.misc.rst"], "indexentries": {}, "objects": {"pyrimidine": [[11, 0, 0, "-", "base"], [11, 0, 0, "-", "chromosome"], [11, 0, 0, "-", "de"], [11, 0, 0, "-", "deco"], [11, 0, 0, "-", "ep"], [11, 0, 0, "-", "errors"], [11, 0, 0, "-", "es"], [11, 0, 0, "-", "gene"], [11, 0, 0, "-", "individual"], [11, 0, 0, "-", "meta"], [11, 0, 0, "-", "multipopulation"], [11, 0, 0, "-", "optimize"], [11, 0, 0, "-", "population"], [11, 0, 0, "-", "pso"], [11, 0, 0, "-", "qga"], [11, 0, 0, "-", "saga"], [11, 0, 0, "-", "studga"], [11, 0, 0, "-", "utils"]], "pyrimidine.base": [[11, 1, 1, "", "BaseChromosome"], [11, 1, 1, "", "BaseCommunity"], [11, 1, 1, "", "BaseEnvironment"], [11, 1, 1, "", "BaseGene"], [11, 1, 1, "", "BaseIndividual"], [11, 1, 1, "", "BaseMultiPopulation"], [11, 1, 1, "", "BasePopulation"], [11, 5, 1, "", "random"]], "pyrimidine.base.BaseChromosome": [[11, 2, 1, "", "alias"], [11, 3, 1, "", "class_name"], [11, 4, 1, "", "cross"], [11, 4, 1, "", "decode"], [11, 2, 1, "id0", "default_size"], [11, 2, 1, "id7", "element_class"], [11, 4, 1, "", "equal_to"], [11, 4, 1, "", "mutate"], [11, 2, 1, "", "params"], [11, 4, 1, "", "random"], [11, 4, 1, "", "replicate"], [11, 4, 1, "", "transition"], [11, 4, 1, "", "x"]], "pyrimidine.base.BaseCommunity": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "flatten"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.base.BaseEnvironment": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "evaluate"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "select"]], "pyrimidine.base.BaseGene": [[11, 4, 1, "", "random"], [11, 2, 1, "id8", "values"]], "pyrimidine.base.BaseIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "cross"], [11, 4, 1, "", "cross2"], [11, 4, 1, "", "decode"], [11, 2, 1, "", "default_size"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "get_neighbour"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mutate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "replicate"], [11, 4, 1, "", "transition"]], "pyrimidine.base.BaseMultiPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 2, 1, "id9", "default_size"], [11, 2, 1, "id10", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "flatten"], [11, 4, 1, "", "get_best_individual"], [11, 3, 1, "", "individuals"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mate"], [11, 4, 1, "", "migrate"], [11, 4, 1, "", "mutate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "select"], [11, 4, 1, "", "transition"]], "pyrimidine.base.BasePopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "cross"], [11, 2, 1, "", "default_size"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "get_rank"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "local_search"], [11, 4, 1, "", "mate"], [11, 4, 1, "", "mate_with"], [11, 4, 1, "", "merge"], [11, 4, 1, "", "migrate"], [11, 4, 1, "", "mutate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "rank"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "select"], [11, 4, 1, "", "transition"]], "pyrimidine.benchmarks": [[12, 0, 0, "-", "approximation"], [12, 0, 0, "-", "cluster"], [12, 0, 0, "-", "fitting"], [12, 0, 0, "-", "linear_model"], [12, 0, 0, "-", "matrix"], [12, 0, 0, "-", "neural_network"], [12, 0, 0, "-", "optimization"], [12, 0, 0, "-", "others"], [12, 0, 0, "-", "special"]], "pyrimidine.benchmarks.approximation": [[12, 1, 1, "", "Function1DApproximation"], [12, 5, 1, "", "lin_comb"]], "pyrimidine.benchmarks.cluster": [[12, 1, 1, "", "KMeans"]], "pyrimidine.benchmarks.cluster.KMeans": [[12, 4, 1, "", "random"]], "pyrimidine.benchmarks.fitting": [[12, 1, 1, "", "CurveFitting"], [12, 1, 1, "", "Fitting"], [12, 1, 1, "", "Painting"], [12, 5, 1, "", "basis"]], "pyrimidine.benchmarks.fitting.CurveFitting": [[12, 4, 1, "", "fit"]], "pyrimidine.benchmarks.fitting.Fitting": [[12, 4, 1, "", "fit"], [12, 4, 1, "", "random"]], "pyrimidine.benchmarks.fitting.Painting": [[12, 4, 1, "", "fit"], [12, 4, 1, "", "toimage"]], "pyrimidine.benchmarks.linear_model": [[12, 5, 1, "", "fun"], [12, 5, 1, "", "lsq"]], "pyrimidine.benchmarks.matrix": [[12, 1, 1, "", "NMF"]], "pyrimidine.benchmarks.matrix.NMF": [[12, 4, 1, "", "random"]], "pyrimidine.benchmarks.neural_network": [[12, 1, 1, "", "MLP"], [12, 1, 1, "", "RNN"]], "pyrimidine.benchmarks.neural_network.MLP": [[12, 4, 1, "", "random"]], "pyrimidine.benchmarks.neural_network.RNN": [[12, 4, 1, "", "random"]], "pyrimidine.benchmarks.optimization": [[12, 1, 1, "", "CurvePath"], [12, 1, 1, "", "FacilityLayout"], [12, 1, 1, "", "Knapsack"], [12, 1, 1, "", "MLE"], [12, 1, 1, "", "MinSpanningTree"], [12, 1, 1, "", "MixMLE"], [12, 1, 1, "", "MultiKnapsack"], [12, 1, 1, "", "ShortestPath"]], "pyrimidine.benchmarks.optimization.FacilityLayout": [[12, 4, 1, "", "random"]], "pyrimidine.benchmarks.optimization.Knapsack": [[12, 4, 1, "", "argsort"], [12, 4, 1, "", "example"], [12, 3, 1, "", "n_bags"], [12, 4, 1, "", "random"], [12, 3, 1, "", "sorted"]], "pyrimidine.benchmarks.optimization.MLE": [[12, 4, 1, "", "random"]], "pyrimidine.benchmarks.optimization.MixMLE": [[12, 4, 1, "", "logpdf"], [12, 4, 1, "", "random"]], "pyrimidine.benchmarks.optimization.MultiKnapsack": [[12, 4, 1, "", "argsort"], [12, 4, 1, "", "random"]], "pyrimidine.benchmarks.optimization.ShortestPath": [[12, 4, 1, "", "random"]], "pyrimidine.benchmarks.others": [[12, 1, 1, "", "Kantorovich"]], "pyrimidine.benchmarks.special": [[12, 5, 1, "", "alpine"], [12, 5, 1, "", "griewangk"], [12, 5, 1, "", "hansen"], [12, 5, 1, "", "michalewiez"], [12, 5, 1, "", "rastrigrin"], [12, 5, 1, "", "rosenbrock"], [12, 5, 1, "", "schaffer"]], "pyrimidine.chromosome": [[11, 1, 1, "", "ArrayChromosome"], [11, 1, 1, "", "BinaryChromosome"], [11, 1, 1, "", "CircleChromosome"], [11, 1, 1, "", "DigitChromosome"], [11, 1, 1, "", "FloatChromosome"], [11, 1, 1, "", "FloatMatrixChromosome"], [11, 1, 1, "", "ListChromosome"], [11, 1, 1, "", "MatrixChromosome"], [11, 1, 1, "", "NaturalChromosome"], [11, 1, 1, "", "NumpyArrayChromosome"], [11, 1, 1, "", "PermutationChromosome"], [11, 1, 1, "", "PositiveChromosome"], [11, 1, 1, "", "ProbabilityChromosome"], [11, 1, 1, "", "QuantumChromosome"], [11, 1, 1, "", "StochasticMatrixChromosome"], [11, 1, 1, "", "UnitFloatChromosome"], [11, 1, 1, "", "VectorChromosome"], [11, 5, 1, "", "random"]], "pyrimidine.chromosome.ArrayChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "copy"], [11, 4, 1, "", "cross"], [11, 2, 1, "id11", "element_class"], [11, 4, 1, "", "mutate"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.BinaryChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "dual"], [11, 2, 1, "", "element_class"], [11, 4, 1, "", "mutate"], [11, 4, 1, "", "one"], [11, 2, 1, "", "params"], [11, 4, 1, "", "zero"]], "pyrimidine.chromosome.CircleChromosome": [[11, 2, 1, "", "alias"], [11, 2, 1, "", "element_class"], [11, 4, 1, "", "mutate"], [11, 4, 1, "", "normalize"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.DigitChromosome": [[11, 2, 1, "", "alias"], [11, 2, 1, "", "element_class"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.FloatChromosome": [[11, 2, 1, "", "alias"], [11, 2, 1, "", "element_class"], [11, 4, 1, "", "mutate"], [11, 2, 1, "", "params"], [11, 4, 1, "", "random_neighbour"], [11, 2, 1, "", "sigma"]], "pyrimidine.chromosome.FloatMatrixChromosome": [[11, 2, 1, "", "alias"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.ListChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "copy"], [11, 4, 1, "", "cross"], [11, 2, 1, "id12", "element_class"], [11, 4, 1, "", "mutate"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.MatrixChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "cross"], [11, 4, 1, "", "mutate"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.NaturalChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "dual"], [11, 2, 1, "", "element_class"], [11, 4, 1, "", "mutate"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.NumpyArrayChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "clone"], [11, 4, 1, "", "copy"], [11, 4, 1, "", "cross"], [11, 4, 1, "", "cross2"], [11, 2, 1, "id13", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "mutate"], [11, 2, 1, "", "params"], [11, 4, 1, "", "random"]], "pyrimidine.chromosome.PermutationChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "cross"], [11, 2, 1, "", "default_size"], [11, 4, 1, "", "dual"], [11, 2, 1, "", "element_class"], [11, 4, 1, "", "identity"], [11, 4, 1, "", "move_toward"], [11, 4, 1, "", "mutate"], [11, 2, 1, "", "params"], [11, 4, 1, "", "random"]], "pyrimidine.chromosome.PositiveChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "normalize"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.ProbabilityChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "check"], [11, 4, 1, "", "cross"], [11, 2, 1, "", "element_class"], [11, 4, 1, "", "mutate"], [11, 4, 1, "", "normalize"], [11, 2, 1, "", "params"], [11, 4, 1, "", "random"], [11, 4, 1, "", "random_neighbour"]], "pyrimidine.chromosome.QuantumChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "decode"], [11, 4, 1, "", "measure"], [11, 3, 1, "", "measure_result"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.StochasticMatrixChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "normalize"], [11, 2, 1, "", "params"]], "pyrimidine.chromosome.UnitFloatChromosome": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "dual"], [11, 2, 1, "", "element_class"], [11, 4, 1, "", "mutate"], [11, 4, 1, "", "normalize"], [11, 2, 1, "", "params"], [11, 4, 1, "", "tobinary"]], "pyrimidine.chromosome.VectorChromosome": [[11, 2, 1, "", "alias"], [11, 2, 1, "", "params"]], "pyrimidine.de": [[11, 1, 1, "", "DifferentialEvolution"], [11, 1, 1, "", "DifferentialEvolution1"], [11, 5, 1, "", "random"]], "pyrimidine.de.DifferentialEvolution": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 2, 1, "", "default_size"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "init"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "move"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "transition"]], "pyrimidine.de.DifferentialEvolution1": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "init"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "move"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.deco": [[11, 1, 1, "", "Regester"], [11, 1, 1, "", "add_cache"], [11, 1, 1, "", "add_memory"], [11, 5, 1, "", "basic_memory"], [11, 5, 1, "", "clear_cache"], [11, 5, 1, "", "clear_fitness"], [11, 5, 1, "", "method_cache"], [11, 1, 1, "", "regester_map"], [11, 1, 1, "", "set_fitness"], [11, 5, 1, "", "side_effect"]], "pyrimidine.deco.add_cache": [[11, 2, 1, "", "attrs"], [11, 2, 1, "", "cmd"], [11, 2, 1, "", "methods"]], "pyrimidine.ep": [[11, 1, 1, "", "BaseEPIndividual"], [11, 1, 1, "", "EvolutionProgramming"]], "pyrimidine.ep.BaseEPIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "decode"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mutate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 3, 1, "", "variance"]], "pyrimidine.ep.EvolutionProgramming": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "select"], [11, 4, 1, "", "transition"]], "pyrimidine.errors": [[11, 6, 1, "", "RegesterError"], [11, 6, 1, "", "UnavalibleAttributeError"], [11, 6, 1, "", "UnknownSizeError"]], "pyrimidine.es": [[11, 1, 1, "", "EvolutionStrategy"]], "pyrimidine.es.EvolutionStrategy": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "init"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "select_best_individuals"], [11, 4, 1, "", "transition"]], "pyrimidine.gene": [[11, 1, 1, "", "BinaryGene"], [11, 1, 1, "", "CircleGene"], [11, 1, 1, "", "DigitGene"], [11, 1, 1, "", "FloatGene"], [11, 1, 1, "", "IntegerGene"], [11, 1, 1, "", "NaturalGene"], [11, 1, 1, "", "PeriodicGene"], [11, 1, 1, "", "SemiCircleGene"], [11, 1, 1, "", "UnitFloatGene"]], "pyrimidine.gene.BinaryGene": [[11, 4, 1, "", "random"]], "pyrimidine.gene.CircleGene": [[11, 2, 1, "", "lb"], [11, 2, 1, "", "period"], [11, 2, 1, "", "ub"]], "pyrimidine.gene.FloatGene": [[11, 2, 1, "", "lb"], [11, 4, 1, "", "random"], [11, 2, 1, "", "ub"]], "pyrimidine.gene.IntegerGene": [[11, 2, 1, "", "lb"], [11, 4, 1, "", "random"], [11, 2, 1, "", "ub"]], "pyrimidine.gene.NaturalGene": [[11, 2, 1, "", "lb"], [11, 4, 1, "", "random"], [11, 2, 1, "", "ub"]], "pyrimidine.gene.PeriodicGene": [[11, 3, 1, "", "period"]], "pyrimidine.gene.SemiCircleGene": [[11, 2, 1, "", "lb"], [11, 2, 1, "", "ub"]], "pyrimidine.gene.UnitFloatGene": [[11, 2, 1, "", "lb"], [11, 2, 1, "", "ub"]], "pyrimidine.individual": [[11, 1, 1, "", "AgeIndividual"], [11, 1, 1, "", "GenderIndividual"], [11, 1, 1, "", "MixedIndividual"], [11, 1, 1, "", "MonoIndividual"], [11, 1, 1, "", "MultiIndividual"], [11, 1, 1, "", "PhantomIndividual"], [11, 2, 1, "", "PolyIndividual"], [11, 5, 1, "", "binaryIndividual"], [11, 5, 1, "", "makeBinaryIndividual"], [11, 5, 1, "", "makeIndividual"]], "pyrimidine.individual.AgeIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.individual.GenderIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 3, 1, "", "gender"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.individual.MixedIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "default_size"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "random"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.individual.MonoIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "chromosome"], [11, 4, 1, "", "decode"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "random"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "set_size"]], "pyrimidine.individual.MultiIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.individual.PhantomIndividual": [[11, 4, 1, "", "after_setter"], [11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "backup"], [11, 3, 1, "", "cache"], [11, 4, 1, "", "clear_cache"], [11, 4, 1, "", "cleared"], [11, 4, 1, "", "copy"], [11, 3, 1, "", "elements"], [11, 3, 1, "", "fitness"], [11, 4, 1, "", "init"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 2, 1, "", "phantom"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "set_cache"]], "pyrimidine.learn": [[13, 0, 0, "-", "cluster"], [13, 0, 0, "-", "linear_regression"], [13, 0, 0, "-", "neural_network"]], "pyrimidine.learn.cluster": [[13, 1, 1, "", "GAKmeans"]], "pyrimidine.learn.cluster.GAKmeans": [[13, 4, 1, "", "config"], [13, 4, 1, "", "create_model"], [13, 2, 1, "", "estimated_params"], [13, 4, 1, "", "set_fit_request"], [13, 4, 1, "", "set_score_request"]], "pyrimidine.learn.linear_regression": [[13, 1, 1, "", "GALinearRegression"]], "pyrimidine.learn.linear_regression.GALinearRegression": [[13, 4, 1, "", "config"], [13, 4, 1, "", "create_model"], [13, 2, 1, "", "estimated_params"], [13, 4, 1, "", "set_fit_request"], [13, 4, 1, "", "set_score_request"]], "pyrimidine.learn.neural_network": [[13, 1, 1, "", "GAMLPRegressor"]], "pyrimidine.learn.neural_network.GAMLPRegressor": [[13, 4, 1, "", "config"], [13, 4, 1, "", "create_model"], [13, 2, 1, "", "estimated_params"], [13, 2, 1, "", "hidden_dim"], [13, 2, 1, "", "max_iter"], [13, 2, 1, "", "n_layers"], [13, 4, 1, "", "set_fit_request"], [13, 4, 1, "", "set_score_request"]], "pyrimidine.local_search": [[14, 0, 0, "-", "random_walk"], [14, 0, 0, "-", "simulated_annealing"], [14, 0, 0, "-", "tabu_search"]], "pyrimidine.local_search.random_walk": [[14, 1, 1, "", "RandomWalk"]], "pyrimidine.local_search.random_walk.RandomWalk": [[14, 4, 1, "", "mutate"], [14, 2, 1, "", "params"], [14, 4, 1, "", "transit"]], "pyrimidine.local_search.simulated_annealing": [[14, 1, 1, "", "SimulatedAnnealing"]], "pyrimidine.local_search.simulated_annealing.SimulatedAnnealing": [[14, 2, 1, "", "alias"], [14, 4, 1, "", "apply"], [14, 3, 1, "", "elements"], [14, 4, 1, "", "isa"], [14, 4, 1, "", "move"], [14, 3, 1, "", "n_elements"], [14, 2, 1, "id0", "params"], [14, 4, 1, "", "regester"], [14, 4, 1, "", "regester_map"], [14, 4, 1, "", "transition"]], "pyrimidine.local_search.tabu_search": [[14, 1, 1, "", "BaseTabuSearch"], [14, 1, 1, "", "SimpleTabuSearch"], [14, 5, 1, "", "random"]], "pyrimidine.local_search.tabu_search.BaseTabuSearch": [[14, 2, 1, "", "alias"], [14, 4, 1, "", "apply"], [14, 4, 1, "", "backup"], [14, 4, 1, "", "copy"], [14, 3, 1, "", "elements"], [14, 3, 1, "", "fitness"], [14, 4, 1, "", "get_neighbour"], [14, 4, 1, "", "init"], [14, 4, 1, "", "isa"], [14, 3, 1, "", "memory"], [14, 3, 1, "", "n_elements"], [14, 2, 1, "", "params"], [14, 4, 1, "", "regester"], [14, 4, 1, "", "regester_map"], [14, 4, 1, "", "set_memory"], [14, 3, 1, "", "solution"], [14, 4, 1, "", "transition"], [14, 4, 1, "", "update_tabu_list"]], "pyrimidine.local_search.tabu_search.SimpleTabuSearch": [[14, 2, 1, "", "alias"], [14, 4, 1, "", "apply"], [14, 3, 1, "", "elements"], [14, 4, 1, "", "get_neighbour"], [14, 4, 1, "", "isa"], [14, 3, 1, "", "n_elements"], [14, 2, 1, "", "params"], [14, 4, 1, "", "regester"], [14, 4, 1, "", "regester_map"]], "pyrimidine.meta": [[11, 1, 1, "", "MetaArray"], [11, 1, 1, "", "MetaContainer"], [11, 1, 1, "", "MetaHighContainer"], [11, 1, 1, "", "MetaList"], [11, 1, 1, "", "MetaSingle"], [11, 1, 1, "", "MetaTuple"], [11, 1, 1, "", "ParamType"], [11, 1, 1, "", "System"], [11, 5, 1, "", "inherit"]], "pyrimidine.meta.MetaContainer": [[11, 4, 1, "", "random"]], "pyrimidine.meta.ParamType": [[11, 4, 1, "", "mixin"], [11, 4, 1, "", "set"], [11, 4, 1, "", "set_params"]], "pyrimidine.misc": [[15, 0, 0, "-", "aco"], [15, 0, 0, "-", "ba"], [15, 0, 0, "-", "fa"], [15, 0, 0, "-", "gsa"], [15, 0, 0, "-", "sma"], [15, 0, 0, "-", "ssa"]], "pyrimidine.misc.aco": [[15, 1, 1, "", "BaseAnt"], [15, 1, 1, "", "BaseAntColony"], [15, 5, 1, "", "random"]], "pyrimidine.misc.aco.BaseAnt": [[15, 4, 1, "", "get_length"], [15, 4, 1, "", "init"], [15, 4, 1, "", "move"], [15, 2, 1, "", "params"], [15, 4, 1, "", "release_pheromone"], [15, 4, 1, "", "reset"]], "pyrimidine.misc.aco.BaseAntColony": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "apply"], [15, 2, 1, "", "element_class"], [15, 3, 1, "", "elements"], [15, 4, 1, "", "from_distances"], [15, 4, 1, "", "from_positions"], [15, 4, 1, "", "init"], [15, 4, 1, "", "isa"], [15, 4, 1, "", "move"], [15, 3, 1, "", "move_proba"], [15, 3, 1, "", "n_elements"], [15, 2, 1, "", "params"], [15, 4, 1, "", "regester"], [15, 4, 1, "", "regester_map"], [15, 4, 1, "", "transition"], [15, 4, 1, "", "update_pheromone"]], "pyrimidine.misc.ba": [[15, 1, 1, "", "Bat"], [15, 1, 1, "", "Bats"], [15, 5, 1, "", "random"]], "pyrimidine.misc.ba.Bat": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "apply"], [15, 3, 1, "", "elements"], [15, 4, 1, "", "isa"], [15, 4, 1, "", "move"], [15, 3, 1, "", "n_elements"], [15, 2, 1, "", "params"], [15, 3, 1, "", "position"], [15, 4, 1, "", "regester"], [15, 4, 1, "", "regester_map"], [15, 3, 1, "", "velocity"]], "pyrimidine.misc.ba.Bats": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "apply"], [15, 3, 1, "", "elements"], [15, 4, 1, "", "init"], [15, 4, 1, "", "isa"], [15, 3, 1, "", "n_elements"], [15, 2, 1, "", "params"], [15, 4, 1, "", "regester"], [15, 4, 1, "", "regester_map"], [15, 4, 1, "", "transition"]], "pyrimidine.misc.fa": [[15, 1, 1, "", "BaseFirefly"], [15, 1, 1, "", "StandardFireflies"], [15, 5, 1, "", "attractiveness"]], "pyrimidine.misc.fa.BaseFirefly": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "apply"], [15, 3, 1, "", "elements"], [15, 4, 1, "", "isa"], [15, 3, 1, "", "n_elements"], [15, 2, 1, "", "params"], [15, 4, 1, "", "random_move"], [15, 4, 1, "", "regester"], [15, 4, 1, "", "regester_map"], [15, 4, 1, "", "update_vilocity"]], "pyrimidine.misc.fa.StandardFireflies": [[15, 2, 1, "", "element_class"], [15, 2, 1, "", "params"], [15, 4, 1, "", "transition"]], "pyrimidine.misc.gsa": [[15, 1, 1, "", "GravitySearch"], [15, 1, 1, "", "Particle"], [15, 5, 1, "", "random"]], "pyrimidine.misc.gsa.GravitySearch": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "compute_accelerate"], [15, 4, 1, "", "compute_mass"], [15, 2, 1, "", "default_size"], [15, 2, 1, "", "element_class"], [15, 4, 1, "", "move"], [15, 2, 1, "", "params"], [15, 4, 1, "", "transition"]], "pyrimidine.misc.gsa.Particle": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "apply"], [15, 2, 1, "", "default_size"], [15, 2, 1, "", "element_class"], [15, 3, 1, "", "elements"], [15, 4, 1, "", "isa"], [15, 4, 1, "", "move"], [15, 3, 1, "", "n_elements"], [15, 2, 1, "", "params"], [15, 3, 1, "", "position"], [15, 4, 1, "", "regester"], [15, 4, 1, "", "regester_map"], [15, 3, 1, "", "velocity"]], "pyrimidine.misc.sma": [[15, 1, 1, "", "SlimeMould"], [15, 1, 1, "", "SlimyMaterial"], [15, 5, 1, "", "random"]], "pyrimidine.misc.sma.SlimeMould": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "apply"], [15, 4, 1, "", "approach_food"], [15, 2, 1, "", "element_class"], [15, 3, 1, "", "elements"], [15, 4, 1, "", "get_ranks"], [15, 4, 1, "", "isa"], [15, 3, 1, "", "n_elements"], [15, 2, 1, "", "params"], [15, 4, 1, "", "regester"], [15, 4, 1, "", "regester_map"], [15, 4, 1, "", "transition"]], "pyrimidine.misc.sma.SlimyMaterial": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "apply"], [15, 4, 1, "", "approach_food"], [15, 4, 1, "", "backup"], [15, 4, 1, "", "copy"], [15, 3, 1, "", "elements"], [15, 3, 1, "", "fitness"], [15, 4, 1, "", "init"], [15, 4, 1, "", "isa"], [15, 3, 1, "", "memory"], [15, 3, 1, "", "n_elements"], [15, 2, 1, "", "params"], [15, 4, 1, "", "random_move"], [15, 4, 1, "", "regester"], [15, 4, 1, "", "regester_map"], [15, 4, 1, "", "set_memory"], [15, 3, 1, "", "solution"]], "pyrimidine.misc.ssa": [[15, 1, 1, "", "BaseSparrow"], [15, 1, 1, "", "Producer"], [15, 1, 1, "", "Scrounger"], [15, 1, 1, "", "StandardSparrowSearch"], [15, 5, 1, "", "random"]], "pyrimidine.misc.ssa.BaseSparrow": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "backup"], [15, 4, 1, "", "copy"], [15, 3, 1, "", "fitness"], [15, 4, 1, "", "init"], [15, 3, 1, "", "memory"], [15, 4, 1, "", "move"], [15, 2, 1, "", "params"], [15, 4, 1, "", "set_memory"], [15, 3, 1, "", "solution"]], "pyrimidine.misc.ssa.Producer": [[15, 2, 1, "", "alias"], [15, 2, 1, "", "params"]], "pyrimidine.misc.ssa.Scrounger": [[15, 2, 1, "", "alias"], [15, 4, 1, "", "move"], [15, 2, 1, "", "params"]], "pyrimidine.misc.ssa.StandardSparrowSearch": [[15, 2, 1, "", "element_class"], [15, 4, 1, "", "init"], [15, 2, 1, "", "params"], [15, 4, 1, "", "transition"]], "pyrimidine.multipopulation": [[11, 1, 1, "", "DualPopulation"], [11, 1, 1, "", "HybridPopulation"], [11, 1, 1, "", "MultiPopulation"], [11, 5, 1, "", "random"]], "pyrimidine.multipopulation.DualPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 2, 1, "", "default_size"], [11, 3, 1, "", "elements"], [11, 3, 1, "", "female_fitness"], [11, 3, 1, "", "female_population"], [11, 3, 1, "", "females"], [11, 4, 1, "", "flatten"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "male_fitness"], [11, 3, 1, "", "male_population"], [11, 3, 1, "", "males"], [11, 4, 1, "", "match"], [11, 4, 1, "", "mate"], [11, 4, 1, "", "merge"], [11, 4, 1, "", "mutate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "select"], [11, 4, 1, "", "transition"]], "pyrimidine.multipopulation.HybridPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "flatten"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "migrate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.multipopulation.MultiPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "flatten"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.optimize": [[11, 1, 1, "", "Optimizer"], [11, 5, 1, "", "de_minimize"], [11, 5, 1, "", "ga_minimize"], [11, 5, 1, "", "ga_minimize_1d"]], "pyrimidine.optimize.Optimizer": [[11, 2, 1, "", "Population"], [11, 2, 1, "", "min_max"]], "pyrimidine.population": [[11, 1, 1, "", "AgePopulation"], [11, 1, 1, "", "DualPopulation"], [11, 1, 1, "", "EliminationPopulation"], [11, 1, 1, "", "GamogenesisPopulation"], [11, 1, 1, "", "HOFPopulation"], [11, 1, 1, "", "LocalSearchPopulation"], [11, 1, 1, "", "ModifiedPopulation"], [11, 2, 1, "", "Population"], [11, 1, 1, "", "StandardPopulation"], [11, 5, 1, "", "makeBinaryPopulation"], [11, 5, 1, "", "random"]], "pyrimidine.population.AgePopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "eliminate"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "transition"]], "pyrimidine.population.DualPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "dual"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "transition"]], "pyrimidine.population.EliminationPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "eliminate"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "transition"]], "pyrimidine.population.GamogenesisPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "get_homosex"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.population.HOFPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "best_individual"], [11, 3, 1, "", "elements"], [11, 2, 1, "", "hall_of_fame"], [11, 4, 1, "", "init"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "max_fitness"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "transition"], [11, 4, 1, "", "update_hall_of_fame"]], "pyrimidine.population.LocalSearchPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "transition"]], "pyrimidine.population.ModifiedPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mutate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.population.StandardPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "transition"]], "pyrimidine.pso": [[11, 1, 1, "", "BaseParticle"], [11, 1, 1, "", "DiscreteParticleSwarm"], [11, 1, 1, "", "Particle"], [11, 1, 1, "", "ParticleSwarm"], [11, 5, 1, "", "random"]], "pyrimidine.pso.BaseParticle": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "backup"], [11, 3, 1, "", "best_position"], [11, 4, 1, "", "copy"], [11, 4, 1, "", "decode"], [11, 2, 1, "", "default_size"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 3, 1, "", "fitness"], [11, 4, 1, "", "init"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "memory"], [11, 4, 1, "", "move"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 3, 1, "", "position"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "set_memory"], [11, 3, 1, "", "solution"], [11, 4, 1, "", "update_vilocity"], [11, 3, 1, "", "velocity"]], "pyrimidine.pso.DiscreteParticleSwarm": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "move"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.pso.Particle": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 2, 1, "", "default_size"], [11, 3, 1, "", "direction"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 3, 1, "", "position"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "update_vilocity"], [11, 4, 1, "", "update_vilocity_by_fame"], [11, 3, 1, "", "velocity"]], "pyrimidine.pso.ParticleSwarm": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "backup"], [11, 3, 1, "", "best_fitness"], [11, 2, 1, "", "default_size"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "init"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "move"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "transition"], [11, 4, 1, "", "update_hall_of_fame"]], "pyrimidine.qga": [[11, 1, 1, "", "QuantumPopulation"]], "pyrimidine.qga.QuantumPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "backup"], [11, 2, 1, "", "default_size"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "update_hall_of_fame"]], "pyrimidine.saga": [[11, 1, 1, "", "BaseSelfAdaptiveIndividual"], [11, 1, 1, "", "RankingIndividual"], [11, 1, 1, "", "SSAPopulation"], [11, 1, 1, "", "SelfAdaptiveIndividual"], [11, 5, 1, "", "lim"], [11, 5, 1, "", "random"]], "pyrimidine.saga.BaseSelfAdaptiveIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "desire"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "mate_prob"], [11, 3, 1, "", "mutate_prob"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.saga.RankingIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 2, 1, "", "ranking"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.saga.SSAPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 4, 1, "", "doom"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "is_crowd"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "match"], [11, 4, 1, "", "mate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 4, 1, "", "select"], [11, 4, 1, "", "transition"]], "pyrimidine.saga.SelfAdaptiveIndividual": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "desire"], [11, 2, 1, "", "element_class"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mate"], [11, 3, 1, "", "mate_prob"], [11, 4, 1, "", "mutate"], [11, 3, 1, "", "mutate_prob"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"], [11, 3, 1, "", "trait"]], "pyrimidine.studga": [[11, 1, 1, "", "StudPopulation"], [11, 5, 1, "", "random"]], "pyrimidine.studga.StudPopulation": [[11, 2, 1, "", "alias"], [11, 4, 1, "", "apply"], [11, 3, 1, "", "elements"], [11, 4, 1, "", "isa"], [11, 4, 1, "", "mate"], [11, 3, 1, "", "n_elements"], [11, 2, 1, "", "params"], [11, 4, 1, "", "regester"], [11, 4, 1, "", "regester_map"]], "pyrimidine.utils": [[11, 5, 1, "", "boltzmann_select"], [11, 5, 1, "", "choice"], [11, 5, 1, "", "choice_uniform"], [11, 5, 1, "", "choice_with_fitness"], [11, 5, 1, "", "copy"], [11, 5, 1, "", "hl"], [11, 5, 1, "", "max0"], [11, 5, 1, "", "metropolis_rule"], [11, 5, 1, "", "pattern"], [11, 5, 1, "", "prufer_decode"], [11, 5, 1, "", "randint2"], [11, 5, 1, "", "random"], [11, 5, 1, "", "rotate"], [11, 5, 1, "", "rotations"]]}, "objnames": {"0": ["py", "module", "Python module"], "1": ["py", "class", "Python class"], "2": ["py", "attribute", "Python attribute"], "3": ["py", "property", "Python property"], "4": ["py", "method", "Python method"], "5": ["py", "function", "Python function"], "6": ["py", "exception", "Python exception"]}, "objtypes": {"0": "py:module", "1": "py:class", "2": "py:attribute", "3": "py:property", "4": "py:method", "5": "py:function", "6": "py:exception"}, "terms": {"": [2, 4, 6, 12, 14, 15], "0": [2, 4, 5, 8, 11, 12, 13, 14, 15], "0001": [2, 11, 13, 14], "001": 15, "0078125": 5, "01001101": 11, "01100010011111010100100110111010001110101100011111": 4, "05": 11, "06": 11, "0b100": 11, "0x1065715e0": 11, "1": [2, 5, 6, 10, 11, 12, 13, 14, 15], "10": [2, 4, 7, 11, 13, 14, 15], "100": [2, 4, 11, 12, 13, 14, 15], "11": 7, "111": [2, 4, 5], "13": 15, "134": 11, "141592653589793": 11, "14285714285717": 4, "15": [2, 4], "169": 15, "178": 15, "179": 15, "190": 14, "1942": 11, "1948": 11, "1966": 11, "1973": [2, 11], "1983": 14, "1986": 14, "1989": 14, "1995": 11, "1997": 14, "1998": 11, "1d": 11, "1e": 11, "2": [5, 6, 10, 11, 12, 13, 14, 15], "20": [2, 4, 5, 6, 11, 15], "200": [2, 5, 14], "2001": 11, "2005": [11, 15], "2009": 15, "2010": 15, "2011": 15, "2012": 15, "2013": 15, "2016": 15, "2020": 15, "206": 14, "21": 15, "22": 15, "220": 14, "2232": 15, "2248": 15, "23": 4, "243": 4, "25": [2, 4], "252": 4, "278": 4, "28": 4, "280": 4, "283185307179586": 11, "29": 15, "2n": 11, "3": [2, 7, 10, 11, 12, 13, 15], "300": [12, 13], "302": 4, "315": 8, "32": 14, "350": 8, "353": 15, "36": 11, "37": 11, "373": 15, "4": [10, 11, 12, 13, 14, 15], "4598": 14, "464": 15, "480": 8, "483": 15, "5": [10, 11, 12, 15], "50": [4, 5, 11, 12], "500": 12, "526737168276654": 4, "560": 8, "57142857142856": 4, "589508565206224": 4, "6": [10, 11, 12, 15], "600": 8, "631855694235433": 4, "640": 8, "671": 14, "679": 14, "7": [4, 10, 11, 12, 15], "7142857142857": 4, "71428571428572": 4, "75": [2, 11, 15], "8": [4, 7, 11, 12, 13, 15], "9": [7, 11, 15], "910889654016373": 4, "944664098197542": 4, "95": [4, 15], "99": [2, 14], "A": [1, 6, 11, 12, 15], "And": 11, "As": [6, 11], "But": [1, 11], "For": [1, 4, 6, 11], "If": [1, 2, 5, 6, 8, 11, 15], "In": [2, 4, 5, 6, 11, 15], "It": [1, 2, 4, 6, 7, 11, 15], "No": [6, 11], "One": [1, 4], "The": [1, 2, 3, 4, 5, 6, 9, 11, 13, 14, 15], "Then": [2, 4], "There": [2, 6], "To": [4, 5, 6, 11, 15], "Will": 2, "_": [1, 2, 4], "__class__": 4, "__init__": 4, "__int__": 11, "__lt__": 4, "__main__": 4, "__name__": 4, "__str__": 4, "_cach": 11, "_choromosom": 6, "_chromosom": [4, 6], "_chromosome1": 6, "_chromosome2": 6, "_decod": 11, "_evalu": 4, "_fit": [1, 2, 4, 5, 6, 11], "_hybridpopul": 4, "_individu": [4, 11], "_individual1": 6, "_individual2": 6, "_memori": [5, 11], "_multipopul": 4, "_particl": 2, "_popul": 4, "_prob": 1, "_rate": 1, "a1x": 12, "a1xt": 12, "a2f": 12, "ab": 4, "abstract": 1, "acceler": [2, 15], "acceleration_coeffici": 11, "acceleromet": 8, "access": [8, 11], "accord": 11, "achiev": 6, "aco": [9, 11], "across": 6, "act": 11, "action": [2, 14], "ad": 13, "adapt": [6, 11], "add": [6, 9, 11], "add_cach": 11, "add_memori": [5, 11], "add_subplot": [2, 4, 5], "adher": 2, "adjust": 15, "adopt": 6, "advis": [2, 11], "affect": 11, "after": [2, 4, 5, 11, 15], "after_sett": 11, "ag": 11, "again": 11, "ageindividu": 11, "agepopul": 11, "aim": 1, "al": 15, "alam": 6, "alarm": 15, "algebr": 11, "algebra": [1, 3, 10], "algo": [9, 11, 14], "algorithm": [2, 3, 5, 7, 9, 11, 13, 14, 15], "alia": [10, 11, 13, 14, 15], "all": [1, 2, 11], "allow": [8, 13], "allowfullscreen": 8, "along": 5, "alpha": [12, 15], "alpin": 12, "also": [2, 6, 7, 11], "alwai": [1, 5], "am": 6, "amir": 15, "among": 11, "an": [1, 2, 3, 4, 5, 6, 9, 11, 13, 14, 15], "analysi": 15, "ani": [0, 4, 9, 10, 11], "anneal": [2, 6, 11, 14, 15], "anoth": [11, 14, 15], "ant": [9, 15], "anthor": 11, "api": [0, 2, 6, 10], "append": [1, 2, 4], "appli": [6, 11, 14, 15], "applic": [3, 6, 15], "approach": [11, 15], "approach_food": 15, "approxim": 11, "ar": [1, 6, 11, 13, 15], "arg": [2, 4, 5, 11, 13, 14, 15], "argmax": 11, "argsort": [1, 4, 12], "argument": [2, 9, 10, 11], "arrai": [1, 4, 6, 7, 11, 13], "arraychromosom": 11, "articl": 6, "as_chromosom": 11, "aspir": 2, "assert": 11, "assign": 2, "associ": 6, "astyp": 4, "attenuation_coeffici": 15, "attr": 11, "attr_nam": 11, "attract": 15, "attribut": [2, 6, 10, 11, 14, 15], "attributeerror": 11, "author": [4, 7], "auto": 13, "autoplai": 8, "autoref": 6, "ax": [2, 4, 5], "ax2": 4, "b": [4, 11, 12], "b1": 12, "b2": 12, "ba": [1, 11], "backup": [2, 4, 5, 11, 14, 15], "base": [1, 2, 4, 5, 6, 12, 13, 14, 15], "baseant": 15, "baseantcoloni": 15, "basechromosom": [6, 11], "basecommun": 11, "baseenvioren": 11, "baseenviron": 11, "baseepindividu": 11, "baseestim": 13, "basefirefli": 15, "basegen": 11, "baseindividu": [1, 2, 6, 11, 14, 15], "basemultipopul": [4, 11], "baseparticl": [2, 11, 15], "basepopul": [1, 2, 4, 6, 11, 15], "baseproblem": 12, "baseselfadaptiveindividu": 11, "basesparrow": 15, "basetabusearch": [2, 14], "basi": [12, 15], "basic": 10, "basic_memori": [4, 5, 6, 11], "bat": 15, "becaus": 6, "been": [2, 6, 11], "befor": [10, 15], "begin": 6, "behavior": [5, 6, 11, 15], "behaviour": 11, "beij": 3, "below": 6, "benchmark": [4, 5, 11], "berlin": 15, "best": [1, 2, 4, 5, 6, 11, 14, 15], "best_el": [1, 11, 15], "best_fit": [2, 5, 11], "best_individu": [4, 11, 15], "best_particl": 11, "best_posit": 11, "beta": 15, "better": [2, 15], "between": [4, 6, 11], "bimsa": 3, "bin": [2, 4, 5], "binari": [1, 4, 11], "binarychromosom": [1, 4, 5, 11], "binarygen": 11, "binaryindividu": [1, 11], "biologischen": [2, 11], "blum": 15, "bm": 11, "bo": 15, "boltzmann_select": 11, "bool": [11, 13, 14, 15], "boolean": 6, "bound": 11, "break": 2, "byte": 11, "bytearrai": 11, "c": [4, 11, 12, 14], "c1zt": 12, "c2": 12, "c2g": 12, "cach": [1, 6, 9, 11], "calcul": [1, 11], "call": [1, 2, 6, 11], "can": [1, 2, 4, 5, 6, 7, 11], "capabl": 6, "case": [1, 2, 5, 11], "certain": [11, 14, 15], "chage": 11, "chang": [1, 5, 6, 9, 11, 13], "channel": 12, "check": [4, 5, 7, 11, 14, 15], "cheng": 6, "child": [2, 4, 11], "choic": [2, 11, 12], "choice_uniform": 11, "choice_with_fit": 11, "choos": 11, "choromosom": 11, "chosen": 11, "christian": 15, "chromesom": 11, "chromosom": [2, 4, 6, 7, 14, 15], "ci": 12, "cij": 12, "circlechromosom": [4, 11], "circlegen": 11, "cl": [4, 11, 14, 15], "class": [2, 4, 5, 6, 9, 10, 11, 12, 13, 14, 15], "class_nam": 11, "classic": 1, "classmethod": [4, 11, 13, 15], "clear": [5, 11], "clear_cach": 11, "clear_fit": 11, "clipboard": 8, "clone": [1, 2, 4, 5, 11], "cluster": 11, "cluster_centers_": 13, "cmd": 11, "co": [4, 12], "code": [1, 6, 9, 11], "coef": [2, 12], "coef_": 13, "coefs_": 13, "coerciv": 1, "collect": [1, 4, 11], "collectivemixin": [1, 4, 11], "coloni": [9, 15], "command": [7, 11], "common": 5, "compact": 1, "comparison": [0, 2, 6, 10], "compet": 4, "compete_prob": 4, "competit": [0, 10, 11], "complic": [2, 11], "compos": [6, 9, 11], "compuls": 2, "comput": [1, 4, 5, 6, 7, 9, 11, 14, 15], "compute_acceler": 15, "compute_mass": 15, "concis": 6, "conf": 11, "config": 13, "configur": 13, "consid": [4, 5, 11, 15], "consist": 11, "constant": 4, "contain": [1, 4, 5, 6, 11], "containt": 11, "context": 1, "continu": 15, "control": 8, "conveni": [9, 11], "convert": 11, "cooper": 15, "copi": [1, 2, 4, 11, 14, 15], "copy_x": 13, "core": [1, 4, 11, 14, 15], "corespond": 12, "correct": 9, "correspond": 5, "could": [1, 6, 11], "counter": [4, 11], "cpy": [2, 4], "craft": [2, 11], "creat": [1, 2, 6, 7, 13, 14], "create_model": 13, "critic": 15, "cross": [1, 2, 4, 11, 14, 15], "cross2": 11, "cross_prob": [2, 11], "crossov": [1, 11], "current": [2, 5, 6, 15], "curv": [2, 4], "curvefit": 12, "curvepath": 12, "custom": [0, 10, 11], "d": [2, 4, 11, 12, 14, 15], "danger": 15, "data": [2, 4, 6, 11, 13, 14, 15], "datafram": [4, 6], "de": [1, 2, 5], "de_minim": 11, "deap": 6, "debug": 9, "deco": [1, 4, 5], "decod": [1, 4, 5, 7, 11], "decor": [1, 4, 6, 9, 10, 11], "decoupl": 6, "def": [1, 2, 4, 5, 11], "default": [4, 5, 11, 13], "default_s": [2, 4, 5, 6, 11, 15], "defin": [1, 2, 4, 5, 6, 9, 11, 15], "definit": [2, 6], "demand": 6, "demo": [2, 4, 5], "denot": 6, "deod": 7, "der": [2, 11], "deriv": [2, 11], "descript": 4, "deseri": 1, "design": [0, 2, 6, 7, 10, 11], "desir": 11, "detail": 6, "determin": 15, "develop": [6, 7, 10, 11, 15], "deviat": 4, "dic": 5, "dict": [2, 11, 14], "dictionari": [1, 11], "differ": [1, 2, 7, 11], "differenti": [6, 10, 11], "differentialevolut": [2, 11], "differentialevolution1": 11, "digit_convert": [4, 7], "digitchromosom": 11, "digitgen": 11, "dimens": 2, "direct": [11, 15], "directli": 11, "dirti": 1, "discret": 11, "discreteparticleswarm": 11, "distanc": 15, "distinct": 6, "distribut": 11, "divers": 6, "do": [1, 2, 4, 5], "document": [7, 9], "doe": 1, "domain": [6, 15], "doom": 11, "dose": 5, "dot": 11, "download": [7, 10], "draw": 4, "dual": [1, 11], "dual_prob": 11, "dualpopul": 11, "duplic": 4, "dure": 6, "e": [1, 6, 13, 14, 15], "ea": 1, "each": [2, 4, 5, 6, 11, 13, 15], "earliest": 6, "easi": [2, 6], "eberhart": 11, "echo": 15, "echoloc": 15, "edg": 12, "effect": [5, 6, 11, 13], "effici": 6, "either": 6, "eleg": 4, "element": [4, 6, 11, 14, 15], "element_class": [2, 4, 5, 6, 11, 14, 15], "elif": 4, "elimin": 11, "eliminationpopul": 11, "els": [2, 4, 5, 11], "emit": 15, "empti": 5, "enabl": 6, "enable_metadata_rout": 13, "encapsul": [5, 6], "encod": [1, 4, 6, 11], "encrypt": 8, "enet": 11, "engin": 15, "enhanc": 15, "enough": 6, "entir": 11, "enumer": [2, 4], "env": [2, 4, 5], "environ": 11, "ep": 1, "epoch": 2, "epsilon": 11, "equal": 4, "equal_to": 11, "equaval": 11, "equiv": [1, 4, 11], "equival": [1, 4], "erm": 12, "error": [1, 13], "esp": [1, 11], "essenc": 6, "essenti": 11, "estim": 13, "estimated_param": 13, "et": 15, "evalu": [4, 5, 11], "ever": 11, "evolu": 4, "evolut": [1, 5, 6, 7, 10, 11, 15], "evolutionari": [0, 1, 6, 7, 10, 11, 15], "evolutionprogram": 11, "evolutionsstrategi": 2, "evolutionstrategi": [2, 4, 11], "evolv": [1, 2, 4, 5, 11], "exampl": [0, 1, 2, 5, 6, 9, 10, 11, 12], "excel": 6, "except": [1, 7, 11], "exchang": 4, "execut": [5, 11], "exist": 13, "exmapl": 10, "exp": 12, "explicitli": 4, "explor": 2, "export": 6, "exptect": 11, "ext_c": [2, 14], "extend": [1, 2, 4, 11, 15], "extens": [6, 7], "extern": 2, "extrem": 4, "ezolv": 2, "ezstat": 7, "f": [2, 4, 5, 11, 12, 14, 15], "fa": [1, 11], "facilitylayout": 12, "factor": [2, 11], "fail": 8, "fals": [2, 11, 13], "fame": [11, 15], "fame_s": 11, "far": 6, "featur": 6, "femal": 11, "female_fit": 11, "female_popul": 11, "few": 7, "fg": 15, "field": 6, "fig": [2, 4, 5], "figur": [2, 4, 5], "fill": 2, "find": 15, "fintess": 1, "firefli": 15, "first": [1, 2, 6, 10], "fit": [2, 4, 5, 9, 10, 11, 13, 14, 15], "fit_intercept": 13, "fitness_cach": [4, 5, 6], "fitnessmixin": [1, 6, 11, 14, 15], "fix": 6, "flag": 2, "flatten": 11, "fleme": 11, "flexibl": 2, "float": [4, 11], "float64": 11, "floatchromosom": [2, 4, 11, 15], "floatgen": 11, "floatmatrixchromosom": 11, "flow": [11, 15], "fogel": [6, 11], "folder": 9, "follow": [1, 2, 4, 6, 7, 11], "forc": [11, 14, 15], "form": [6, 11, 15], "formal": [11, 14], "fortin": 6, "found": 6, "foundat": 15, "frame": 6, "framebord": 8, "framework": [0, 7, 10, 11, 15], "fred": 14, "freedom": 2, "frequenc": [11, 15], "frequent": [1, 11], "from": [1, 2, 4, 5, 6, 7, 11, 14, 15], "from_dist": 15, "from_posit": 15, "frommann": [2, 11], "fsm": 11, "fulli": 6, "fun": 12, "func": 11, "function": [1, 5, 6, 9, 11, 12], "function1dapproxim": 12, "further": 6, "futur": [2, 11], "g": [1, 6, 11, 13, 14, 15], "ga": [1, 5, 6, 7, 8, 10, 11, 13, 14, 15], "ga_minim": 11, "ga_minimize_1d": 11, "ga_minimzi": 5, "gaft": 6, "gagnon": 15, "gakmean": 13, "galinearregress": 13, "gama": 6, "game": 10, "gamlpregressor": 13, "gamma": 15, "gamogenesi": 11, "gamogenesispopul": 11, "gandomi": 15, "gelatt": 14, "gender": 11, "genderindividu": 11, "gene": [1, 6, 14], "gener": [1, 2, 4, 5, 8, 11], "genet": [2, 11, 15], "geppi": 6, "get": [0, 1, 2, 4, 9, 10, 11, 14, 15], "get_": 1, "get_al": 1, "get_all_fit": [1, 4], "get_best_el": [1, 11, 15], "get_best_individu": [2, 4, 11, 15], "get_best_particl": 11, "get_best_popul": 11, "get_best_populationspopul": 11, "get_homosex": 11, "get_length": 15, "get_neighbour": [2, 11, 14], "get_rank": [11, 15], "get_worst_": 15, "get_worst_el": [9, 15], "github": [0, 6, 10], "give": [5, 6, 9], "given": [4, 11, 13], "global": [2, 11, 15], "glover": 14, "good": 4, "gplearn": 6, "gravit": 15, "graviti": 15, "gravity_coeffici": 15, "gravitysearch": 15, "greedy_degre": 15, "griewangk": 12, "gsa": 11, "guid": 13, "gyroscop": 8, "h": 15, "ha": [2, 5, 6, 11, 13], "hack": 10, "hall": 11, "hall_of_fam": [4, 5, 11, 15], "handl": [4, 11], "hansen": 12, "happen": 4, "haskel": 6, "have": [2, 4, 6, 11], "heidelberg": 15, "height": 8, "helper": [0, 1, 10, 11], "henc": 2, "here": [1, 2, 4, 5, 11], "hidden_dim": 13, "higher": 4, "highli": 6, "hinterd": 6, "histori": [0, 2, 4, 5, 10], "hl": 11, "hof": [11, 15], "hof_siz": [11, 15], "hofpopul": [1, 4, 5, 11, 15], "holland": 6, "holzboog": [2, 11], "hossein": 15, "how": [6, 13], "howev": [6, 7], "html": 8, "http": 8, "hybrid": [6, 9], "hybridpopul": [4, 11], "hyperparamet": 6, "i": [0, 1, 2, 4, 5, 6, 7, 9, 10, 11, 12, 13, 14, 15], "iannick": 15, "idea": 10, "ident": 11, "ieee": 11, "ifram": 8, "ignor": [1, 13], "ii": 14, "imag": 12, "implement": [1, 2, 4, 6, 7, 9, 11], "import": [2, 4, 5, 7, 11], "improv": 6, "inact": 6, "includ": [2, 6, 7, 11], "incorpor": 2, "increas": [11, 14, 15], "increasingli": 11, "ind": [2, 4], "inde": 2, "index": [0, 4, 11], "individu": [2, 4, 5, 6, 9, 14, 15], "individul": 4, "indiviud": [1, 5, 11], "inertia": 11, "influenc": [1, 6], "inform": [5, 11, 14, 15], "inherit": [1, 2, 11], "init": [1, 2, 4, 11, 13, 14, 15], "initi": [2, 6, 11, 15], "initial_posit": 15, "initt": [2, 14], "input": [13, 15], "insert": 11, "insid": 13, "inspir": [10, 15], "insprit": 6, "instal": [0, 6, 10], "instanc": [1, 11], "instanti": 1, "instead": [1, 13], "institut": 3, "int": [4, 11, 15], "int32": 11, "int64": 11, "int_": 4, "int_c": [2, 14], "integ": [6, 11], "integergen": 11, "integr": 6, "intellig": [1, 5, 15], "intercept_": 13, "intercepts_": 13, "intern": [2, 15], "interpret": 11, "interv": [11, 14, 15], "intervalconvert": 4, "introduc": [4, 5, 15], "introduct": [1, 15], "invalid": 1, "invent": 11, "is_crowd": 11, "isa": [11, 14, 15], "item": [4, 11], "iter": [2, 4, 5, 6, 9, 15], "iterativemixin": [1, 9], "its": [6, 15], "itself": [5, 6], "j": [2, 4, 11, 12, 14], "jiankai": 15, "john": 11, "jouni": 11, "journal": 15, "jr": 14, "jrand": 2, "judg": 11, "just": [4, 11], "k": [1, 2, 4, 11, 13, 14, 15], "kantorovich": 12, "katoch": 6, "kei": [11, 14, 15], "kennedi": 11, "kenneth": 11, "keyword": 11, "khatib": 11, "kide": 6, "kind": [6, 11], "kirkpatrick": [6, 14], "kmean": [12, 13], "knapsack": [1, 5, 12], "known": 4, "kwarg": [2, 4, 5, 11, 13, 14, 15], "kwpnpcnutci": 8, "l": [11, 15], "label": 6, "lack": 6, "laguna": 14, "lambda": [2, 4, 5, 11, 12], "lambda_": [2, 4, 11], "lampinen": 11, "languag": 6, "last": 11, "latest": 7, "law": 15, "lb": [11, 12], "lead": 6, "learn": [1, 4, 6, 11], "learning_factor": 11, "learning_r": 1, "least": 11, "left": 4, "legend": [4, 5], "len": [2, 4, 11], "length": 11, "let": 4, "level": 1, "librari": 6, "life": 15, "life_span": 11, "like": [5, 11], "lim": 11, "limit": [6, 9], "lin_comb": 12, "line": 4, "linear": 13, "linear_model": 11, "linear_regress": 11, "linearregress": 13, "linux": 7, "list": [6, 11], "listchromosom": 11, "listen": 15, "liter": 11, "literatur": 6, "littl": 4, "lloyd": 13, "load": 1, "loc": 4, "local": [1, 6, 10, 11], "local_max_it": 15, "local_search": [1, 11], "localsearchpopul": [2, 11], "locat": 15, "logbook": 6, "logpdf": 12, "look": [2, 4], "loop": [1, 11], "loud": 15, "love": 11, "lower": 4, "lower_bound": 11, "lsq": 12, "luniv": 15, "lwc2v28kzga": 8, "m": [4, 11, 12, 14, 15], "machin": 1, "mai": 11, "main": 11, "mainli": [1, 2, 5, 6, 11], "make": [3, 4, 5, 6, 11], "makebinaryindividu": 11, "makebinarypopul": 11, "makeindividu": 11, "male": 11, "male_fit": 11, "male_popul": 11, "manag": 11, "manuel": 14, "map": 11, "map_": 11, "mapps": 11, "mapsto": 11, "markov": 11, "match": 11, "mate": [1, 2, 4, 11], "mate_prob": [4, 11, 15], "mate_with": 11, "math": 5, "mathemat": [1, 3, 6], "matplotlib": [2, 4, 5, 7], "matrix": 11, "matrixchromosom": 11, "matur": 6, "max": [4, 11, 12], "max0": 11, "max_fit": [4, 11], "max_it": [2, 4, 5, 9, 11, 13, 14, 15], "max_repeat": [4, 11], "max_t": 4, "max_veloc": 11, "maxim": 1, "maximum": [1, 4, 11, 15], "mayb": 11, "mean": [1, 4, 5, 11, 13], "mean_fit": [4, 5], "meanwhil": 11, "measur": [4, 11], "measure_result": [4, 11], "mechan": 13, "media": 8, "meet": 6, "memori": [2, 6, 11, 14, 15], "mere": 6, "merg": 11, "meta": [1, 6, 13], "metaarrai": [1, 11], "metaclass": [2, 4, 6, 10, 11], "metacontain": [1, 2, 4, 6, 11], "metacontainor": 11, "metadata": 13, "metadata_rout": 13, "metaheurist": 15, "metahighcontain": [4, 6, 11], "metalist": 11, "metasingl": 11, "metatupl": 11, "method": [2, 4, 5, 6, 7, 9, 10, 11, 13, 14, 15], "method_cach": 11, "metropoli": [2, 11], "metropolis_rul": [2, 11], "michalewiez": 12, "migrat": [1, 4, 11], "migrate_prob": 11, "min": [4, 11, 12], "min_": 5, "min_max": 11, "mini": 11, "minim": [4, 11], "minspanningtre": 12, "mirjalili": 15, "misc": [0, 9, 10, 11], "mix": [4, 11], "mixedindividu": [4, 6, 11], "mixin": [2, 6, 10, 11], "mixml": 12, "mle": 12, "mlp": [12, 13], "mlpregressor": 13, "mode": 12, "model": 13, "modif": 6, "modifiedpopul": 11, "monobinaryindividu": 4, "monoindividu": [2, 4, 11], "more": [2, 5, 6, 11], "most": [1, 2], "mould": 15, "move": [2, 9, 11, 14, 15], "move_flag": 15, "move_proba": 15, "move_r": 15, "move_toward": 11, "mp": 4, "mp4": 8, "mu": [2, 4, 11, 12], "mu_c": 12, "multi": [4, 6, 11, 12], "multiindividu": [4, 11], "multiknapsack": 12, "multipopul": [1, 10], "multipopulationmixin": 11, "multivari": 11, "must": 11, "mutat": [1, 2, 4, 11, 14, 15], "mutate_prob": [4, 11, 15], "mutate_prob_lb": 11, "mutate_prob_ub": 11, "mute": 11, "my": 4, "mydata": [4, 5], "myindividu": [2, 4, 5, 11], "myparticleswarm": 2, "mypop": [4, 5], "mypopul": [4, 5, 11], "n": [2, 4, 11, 12, 15], "n_": 1, "n_ant": 15, "n_bag": [4, 5, 12], "n_bat": 15, "n_chromosom": [1, 11, 14, 15], "n_cluster": 13, "n_compon": 12, "n_elder": 11, "n_element": [11, 14, 15], "n_epoch": [2, 14], "n_i": 4, "n_individu": [4, 11, 13, 15], "n_init": 13, "n_iter": 9, "n_job": 13, "n_layer": 13, "n_local_it": 11, "n_observ": 12, "n_particl": [11, 15], "n_popul": 11, "n_sel": 11, "n_step": 15, "n_string": 11, "nach": [2, 11], "name": [1, 4, 6, 7, 11, 13, 14, 15], "namli": 6, "natur": [4, 6, 11, 15], "naturalchromosom": 11, "naturalgen": 11, "ndarrai": [11, 12], "ndim": 4, "neat": 6, "need": [2, 4, 5, 7, 10], "neighbour": [11, 14], "netw": 11, "network": 13, "neural": [11, 13], "neural_network": 11, "neuroevolut": 6, "new": [4, 6, 9, 11, 14, 15], "nezamabadi": 15, "ni": [4, 11], "niazi": 15, "nmf": 12, "node": [11, 12], "none": [2, 4, 5, 11, 12, 13, 14, 15], "normal": 11, "notat": 9, "note": [11, 13], "notimplementederror": [2, 11], "novel": [1, 2, 4, 11, 15], "now": [2, 6], "np": [2, 4, 11], "number": [1, 2, 4, 6, 11, 14, 15], "numer": [1, 6], "numpi": [4, 6, 7, 9, 11], "numpyarraychromosom": 11, "obj": 11, "object": [1, 4, 6, 11, 13, 14, 15], "observ": 9, "obstacl": 15, "occur": 11, "offer": [2, 7], "offspr": [2, 4, 11], "olson": 6, "one": [1, 2, 4, 5, 6, 11, 14, 15], "ones": 11, "onli": [1, 2, 5, 6, 7, 11, 13, 14], "oop": 6, "oper": [6, 11], "opt": [6, 11], "optim": [2, 4, 6, 7, 9, 10, 13, 14, 15], "optimierung": [2, 11], "option": [11, 13, 14, 15], "order": [4, 11], "ordinari": 4, "orient": 6, "origin": [1, 8, 11, 13], "other": [2, 4, 5, 6, 11, 13, 14, 15], "otherwis": [5, 6, 11, 13], "output": [5, 11, 13, 15], "overrid": [1, 2, 11], "overriden": 4, "own": [1, 2, 4, 7], "p": [4, 11, 12, 14, 15], "packag": [0, 2, 6, 7, 10], "pag": 15, "page": [0, 10], "paint": 12, "pair": 11, "panda": 7, "paper": 4, "paral": 9, "parallel": [9, 11], "param": [2, 4, 10, 11, 12, 14, 15], "paramet": [2, 10, 11, 13, 14, 15], "paramtyp": [1, 11], "parent": 11, "part": [5, 6, 11, 14], "parti": 6, "partial": 6, "partic": 2, "particl": [2, 6, 7, 11, 15], "particleswarm": [2, 11], "particular": 11, "particularli": [6, 15], "pass": [2, 4, 11, 13], "path": 15, "pattern": [6, 9, 11], "pd": 15, "pdf": [7, 12], "perceiv": 15, "period": 11, "periodicgen": 11, "permut": 11, "permutationchromosom": 11, "perspect": 6, "peter": 11, "phantom": [2, 11, 14, 15], "phantomindividu": [2, 11, 14], "philosophi": [6, 10], "physic": 15, "pictur": 10, "pieter": 6, "pip": [6, 7], "pipelin": 13, "plai": [4, 8], "platform": 7, "player": 4, "pleas": [6, 11, 13], "plot": [2, 4, 5, 6], "plt": [2, 4, 5], "point": [11, 12], "polyindividu": [4, 11, 15], "pop": [1, 2, 4, 11, 13], "popul": [2, 6, 9, 13, 15], "popular": 6, "population_s": 11, "populationmixin": [1, 2, 4, 9, 11, 15], "posit": [2, 11, 13, 15], "positivechromosom": 11, "possess": 6, "possibl": [1, 4], "pour": 15, "pp": [11, 15], "practic": [2, 11], "pre": 11, "preced": 11, "prei": 15, "present": [2, 4], "press": 15, "previou": [2, 11], "price": 11, "primarili": 6, "principl": [6, 10], "print": [4, 5, 11], "prinzipien": [2, 11], "prob": 11, "proba": 11, "probabilitychromosom": 11, "probabl": [1, 11], "problem": [1, 5, 6, 11, 12, 15], "proc": 11, "process": 11, "produc": [5, 15], "program": [1, 6, 11], "prohibit": 11, "properti": [1, 4, 5, 11, 12, 14, 15], "provid": [2, 6, 11, 13], "prufer": 11, "prufer_decod": 11, "pseudo": 1, "pso": [1, 2], "puls": 15, "pulse_r": 15, "purpos": 4, "py": [2, 6, 9], "pypi": [6, 7], "pyplot": [2, 4, 5], "pypy3": 7, "pyrimidin": [4, 5], "pysr": 6, "python": [2, 4, 6, 7, 11], "python3": [4, 5], "q": 4, "qa": 11, "quantum": [6, 10, 11], "quantumchromosom": 11, "quantumpopul": 11, "quick": 2, "r": [4, 11], "r2": 15, "radtk": 6, "rainer": 11, "rais": [2, 11, 13], "rand": 15, "randint": [2, 4, 11], "randint2": [2, 4, 11], "random": [1, 2, 4, 5, 11, 12, 14, 15], "random_mov": 15, "random_neighbour": [2, 11], "random_st": 13, "random_walk": 11, "randomli": [1, 4, 5, 11], "randomwalk": 14, "rang": [2, 4], "rank": [4, 11, 15], "rankingindividu": 11, "rap": 3, "rashedi": 15, "rastrigrin": 12, "rate": 11, "raw": 8, "re": [5, 6, 11], "read": [5, 6], "real": [1, 6, 7, 11], "recent": 15, "rechenberg": [2, 11], "recommend": [1, 4, 6, 7], "record": [2, 5, 11], "redefin": 2, "reduc": 6, "ref": [2, 11, 14, 15], "refer": [2, 6, 11, 14, 15], "regard": [1, 4, 6, 11], "regest": [11, 14, 15], "regester_map": [11, 14, 15], "regestererror": 11, "regress": [6, 13], "releas": [0, 10], "release_pheromon": 15, "relev": [13, 15], "remark": 11, "remov": [1, 2, 4, 11], "repeat": [1, 4, 11], "repetit": 4, "replac": 2, "replic": [1, 11], "report": 15, "repres": [1, 2, 6, 11, 15], "request": 13, "requir": [2, 4, 10, 11], "research": 2, "reset": 15, "reset_r": 15, "respect": 6, "respons": 6, "result": [4, 5, 6, 11], "retain": 13, "return": [2, 4, 5, 11, 13, 14, 15], "review": [6, 15], "revolut": 11, "rho": 15, "rich": 6, "right": 4, "rnn": 12, "rosenbrock": [2, 4, 12], "rotat": 11, "rout": 13, "rule": [2, 11, 14, 15], "run": [2, 7], "sa": [2, 14], "same": 11, "sampl": 11, "sample_weight": 13, "sapopul": 2, "saryazdi": 15, "save": [1, 4, 5], "scalabl": 6, "scale": [11, 15], "scale_fam": 11, "scenario": 6, "schaffer": 12, "scheme": 6, "scienc": [3, 15], "scikit": [6, 13], "scipi": 7, "scissor": 4, "scope": 11, "score": [4, 13], "scrounger": 15, "sd": 15, "search": [0, 1, 6, 10, 11, 14, 15], "section": [1, 2], "sediment": 15, "see": [1, 2, 4, 6, 13], "seen": 11, "seep": 11, "select": [1, 4, 11], "select_best_individu": [2, 4, 11], "self": [1, 2, 4, 5, 11, 12, 13], "selfadaptiveindividu": 11, "semicirclegen": 11, "sequanc": 4, "sequenc": [4, 11], "serial": 1, "seriou": 6, "serv": 6, "set": [1, 2, 4, 5, 11], "set_": 1, "set_cach": 11, "set_config": 13, "set_fit": [4, 11], "set_fit_request": 13, "set_memori": [11, 14, 15], "set_param": [2, 4, 11], "set_score_request": 13, "set_siz": 11, "set_titl": [2, 4, 5], "set_xlabel": [2, 4, 5], "set_ylabel": [2, 4, 5], "sever": [1, 4], "she": 15, "shena": 15, "short": 1, "shortag": 6, "shortestpath": 12, "should": [4, 6, 11, 13], "show": [2, 4, 5], "side": [5, 6, 11], "side_effect": [6, 11], "sigma": [11, 14], "significantli": 6, "simon": 6, "simpl": [1, 11], "simpletabusearch": 14, "simul": [1, 2, 6, 11, 14, 15], "simulated_ann": 11, "simulatedann": [2, 14], "sin": 12, "sinc": 2, "singl": [2, 6, 11], "size": [2, 4, 11, 12], "skelton": 2, "skeuomorph": 1, "sklearn": 13, "sklearn_api": 6, "slime": 15, "slimemould": 15, "slimymateri": 15, "sma": 11, "so": [4, 5, 6], "softwar": 6, "solut": [1, 2, 4, 5, 6, 7, 9, 11, 14, 15], "solv": [8, 9, 11, 15], "some": [1, 4, 6, 9, 11, 13], "song": 3, "sort": [1, 2, 12], "sourc": 6, "sp": 4, "space": [11, 15], "sparrow": 15, "spcical": 12, "special": [2, 4, 11], "specif": [2, 11], "specifi": [1, 6], "speed": 5, "springer": 15, "sqrt": 11, "src": 8, "ssa": 11, "ssapopul": 11, "st": 15, "stachost": 11, "stand": 7, "standard": [1, 2, 4, 6, 11, 15], "standardfirefli": 15, "standardpopul": [1, 4, 5, 11], "standardsparrowsearch": 15, "starndard": 15, "start": [0, 1, 10], "stat": [2, 4, 5], "state": [11, 14, 15], "statement": [2, 4, 10], "static": 12, "statist": [4, 7], "std": 1, "std_fit": [1, 4], "step": [4, 5, 11, 15], "stochast": 15, "stochasticmatrixchromosom": 11, "stone": 4, "store": [2, 5, 6, 11, 14, 15], "storn": 11, "str": [11, 13], "strategi": [10, 11, 15], "strictli": 2, "string": 11, "structur": 6, "stud": 11, "studpopul": 11, "style": [2, 4, 6, 11], "sub": [11, 13], "subclass": [1, 2, 4, 11], "suffici": 6, "suit": 2, "sum": [4, 11], "sum_": [4, 12], "sum_c": 12, "sum_i": 12, "sum_ij": 12, "sum_j": 12, "supasil": 6, "super": [1, 2, 4, 5, 11], "suppos": [2, 5], "suppress": 11, "sure": [4, 11], "surround": 11, "swarm": [1, 2, 6, 7, 11, 15], "symbol": 6, "system": [1, 2, 6, 11], "sz": 11, "t": [2, 4, 11, 12, 14, 15], "t_i": 4, "tabu": 14, "tabu_list": [2, 14], "tabu_s": [2, 14], "tabu_search": 11, "take": [2, 11], "tan": 12, "task": [1, 4], "techniqu": 5, "technisch": [2, 11], "tediou": 6, "temperatur": [2, 11, 14], "termin": 2, "termt": [2, 14], "test": [2, 9, 10], "test_individu": 2, "than": 15, "thei": [2, 6], "them": [1, 4, 11], "thi": [2, 5, 6, 11, 13, 14, 15], "think": 4, "third": 6, "three": 2, "threshold": 4, "through": 4, "ti": [4, 11], "time": 11, "tobinari": 11, "toc": [3, 4, 5], "toimag": 12, "tol": 13, "tool": 6, "tourn_siz": [11, 15], "tournament": 11, "toward": 11, "tpot": 6, "tradit": 4, "trait": 11, "transform": [4, 11], "transit": [1, 2, 4, 11, 14, 15], "translat": 11, "tree": 11, "trend": 15, "trick": 10, "true": [2, 4, 5, 11, 13, 14, 15], "truncat": 11, "tsp": 8, "tupl": [6, 11], "tutori": 10, "twinx": 4, "two": [2, 4, 5, 6, 11], "type": [0, 1, 2, 4, 6, 10, 11, 13, 14, 15], "type_": [4, 5, 11], "typic": 6, "u": [6, 7, 11], "ub": [11, 12], "uchromosom": 4, "ufunc": 12, "ultrason": 15, "unavalibleattributeerror": 11, "unchang": 13, "uncorrect": 5, "under": 1, "undergon": 6, "underli": 6, "understand": 6, "unextens": 6, "unifrom": 11, "unit": [1, 11], "unitfloatchromosom": 11, "unitfloatgen": 11, "unitintervalconvert": 4, "univers": [0, 10], "unix": 7, "unknownsizeerror": 11, "unlik": [6, 11], "unselect": 4, "up": [5, 11], "updat": [4, 5, 9, 11, 13, 15], "update_hall_of_fam": [4, 5, 11], "update_pheromon": 15, "update_tabu_list": [2, 14], "update_viloc": [11, 15], "update_vilocity_by_fam": 11, "upload": 6, "upper": [4, 11], "upper_bound": 11, "url": 8, "us": [1, 2, 5, 6, 7, 9, 11, 13, 15], "usag": 4, "user": [1, 4, 7, 11, 13], "userstr": 11, "usr": [2, 4, 5], "usual": 4, "usual_side_effect": 11, "util": [1, 2, 4, 6, 11, 13], "v": [1, 11], "v1": 10, "valid": [1, 11], "valu": [2, 11, 14, 15], "vari": 11, "variabl": [11, 12, 15], "varianc": 11, "variant": 11, "varieti": 6, "variou": 6, "vb": 15, "vc": 15, "vecchi": 14, "vectorchromosom": 11, "veloc": [2, 11, 15], "verbos": [4, 13], "veri": 6, "versatil": [6, 7], "version": [1, 2, 7, 9, 13], "video": 10, "view": [1, 6], "virtual": 15, "visual": [6, 7], "volatil": 15, "w": [12, 14], "wa": [14, 15], "wael": 11, "wai": 9, "walk": 14, "wang": 6, "want": [1, 5], "warm_start": 13, "we": [2, 4, 5, 6, 11], "weight": 12, "well": [1, 4, 6], "what": [1, 4, 11], "when": 11, "where": [2, 4, 6, 9, 11, 12, 14, 15], "whether": [11, 14, 15], "which": [1, 6, 7, 11], "while": [1, 2, 4, 11, 15], "whitespac": 11, "who": 15, "whole": 11, "whose": [1, 11], "why": 10, "wi": 12, "wide": [6, 7], "width": 8, "wij": 12, "william": 3, "window": 7, "winner": 4, "within": [2, 6], "without": [4, 11], "work": [5, 13], "worst": [11, 15], "worst_ant": 15, "worst_el": [11, 15], "worst_individu": [11, 15], "worst_popul": 11, "would": 1, "wrap": 1, "wrapper": 11, "write": 8, "x": [4, 5, 11, 12, 13, 14, 15], "x0": 2, "x1": [2, 11], "x2": [2, 11], "x_1": 5, "x_2": 5, "xbest": 15, "xi": [11, 12], "xij": 12, "xin": 15, "xlim": 11, "xuea": 15, "xx": 2, "y": [4, 11, 12, 13], "yang": 15, "yet": 2, "you": [1, 2, 5, 6, 11, 13], "your": [2, 7, 11], "yourdata": [4, 5], "yourindividu": [4, 5], "yourpop": [4, 5], "yourpopul": [4, 5], "youtu": 8, "yt": 12, "zero": [4, 11], "zip": [2, 4, 11], "zt": 12}, "titles": ["Welcome to pyrimidine\u2019s world of genetic algorithm", "API Design", "Customization", "Developers", "Examples and Comparison of Algorithms", "Helpers", "pyrimidine: a universal framework for genetic algorithm", "Installation and Getting Started", "Misc", "Release History", "Welcome to pyrimidine\u2019s world of genetic algorithm", "pyrimidine package", "pyrimidine.benchmarks subpackage", "pyrimidine.learn subpackage", "pyrimidine.local_search subpackage", "pyrimidine.misc subpackage"], "titleterms": {"": [0, 10], "1": 4, "2": 4, "3": 4, "4": 4, "5": [4, 9], "6": [4, 9], "7": 9, "A": 4, "about": [0, 1, 10], "aco": 15, "algebra": 6, "algorithm": [0, 1, 4, 6, 10], "alia": 1, "anoth": 4, "api": 1, "approxim": 12, "argument": 1, "attribut": 1, "ba": 15, "base": 11, "basic": 1, "befor": 9, "benchmark": 12, "cach": 5, "chromosom": [1, 11], "class": 1, "cluster": [12, 13], "code": 4, "commun": 1, "comparison": 4, "content": 10, "creat": 4, "custom": 2, "de": 11, "de_minim": 5, "deco": 11, "decor": 5, "design": 1, "develop": [0, 3], "differenti": 2, "document": 0, "download": 6, "e": 11, "effect": 1, "element": 1, "environ": 1, "ep": 11, "error": 11, "evolut": [2, 4], "evolutionari": 2, "exampl": 4, "exmapl": 4, "fa": 15, "first": 7, "fit": [1, 6, 12], "framework": 6, "ga": [2, 4], "ga_minim": 5, "game": 4, "gene": 11, "genet": [0, 1, 6, 10], "get": 7, "gsa": 15, "hack": 2, "helper": 5, "histori": 9, "hybrid": 4, "idea": 6, "indic": [0, 10], "individu": [1, 11], "inspir": 6, "instal": 7, "iter": 1, "knapsack": 4, "learn": 13, "like": 1, "linear_model": 12, "linear_regress": 13, "list": 1, "local": 2, "local_search": 14, "matrix": 12, "memori": 5, "meta": 11, "metaclass": 1, "method": 1, "misc": [8, 15], "mixin": 1, "model": 1, "modul": [0, 1, 10, 11, 12, 13, 14, 15], "multi": 1, "multipopul": [4, 11], "need": 6, "neural_network": [12, 13], "oper": 1, "optim": [5, 11, 12], "other": [1, 12], "overview": [0, 10], "packag": 11, "param": 1, "paramet": 1, "philosophi": 3, "pictur": 8, "popul": [1, 4, 11], "principl": 2, "problem": 4, "pso": 11, "pure": 1, "pyrimidin": [0, 6, 7, 10, 11, 12, 13, 14, 15], "qga": 11, "quantum": 4, "quantumchromosom": 4, "random_walk": 14, "releas": 9, "requir": 7, "saga": 11, "search": 2, "side": 1, "side_effect": 5, "simpl": 4, "simulated_ann": 14, "sma": 15, "sourc": 4, "special": 12, "ssa": 15, "start": 7, "statement": 6, "strategi": [2, 4], "studga": 11, "subpackag": [11, 12, 13, 14, 15], "tabu": 2, "tabu_search": 14, "test": 7, "trick": 2, "tutori": 8, "univers": 6, "us": 4, "v1": 9, "video": 8, "visual": 4, "welcom": [0, 10], "why": 6, "world": [0, 10]}})
\ No newline at end of file
diff --git a/docs/build/html/source/index.html b/docs/build/html/source/index.html
index 29485f9..843a90f 100644
--- a/docs/build/html/source/index.html
+++ b/docs/build/html/source/index.html
@@ -15,6 +15,8 @@
     <script defer="defer" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
     <link rel="index" title="Index" href="../genindex.html" />
     <link rel="search" title="Search" href="../search.html" />
+    <link rel="next" title="pyrimidine: a universal framework for genetic algorithm" href="Home.html" />
+    <link rel="prev" title="Welcome to pyrimidine’s world of genetic algorithm" href="../index.html" />
 <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Neuton&amp;subset=latin" type="text/css" media="screen" charset="utf-8" />
 <link rel="stylesheet" href="https://fonts.googleapis.com/css?family=Nobile:regular,italic,bold,bolditalic&amp;subset=latin" type="text/css" media="screen" charset="utf-8" />
 <!--[if lte IE 6]>
@@ -32,6 +34,12 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
+        <li class="right" >
+          <a href="Home.html" title="pyrimidine: a universal framework for genetic algorithm"
+             accesskey="N">next</a> |</li>
+        <li class="right" >
+          <a href="../index.html" title="Welcome to pyrimidine’s world of genetic algorithm"
+             accesskey="P">previous</a> |</li>
         <li class="nav-item nav-item-0"><a href="../index.html">pyrimidine 1.7 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Welcome to pyrimidine’s world of genetic algorithm</a></li> 
       </ul>
@@ -156,6 +164,16 @@ <h3><a href="../index.html">Table of Contents</a></h3>
 </ul>
 
   </div>
+  <div>
+    <h4>Previous topic</h4>
+    <p class="topless"><a href="../index.html"
+                          title="previous chapter">Welcome to pyrimidine’s world of genetic algorithm</a></p>
+  </div>
+  <div>
+    <h4>Next topic</h4>
+    <p class="topless"><a href="Home.html"
+                          title="next chapter">pyrimidine: a universal framework for genetic algorithm</a></p>
+  </div>
   <div role="note" aria-label="source link">
     <h3>This Page</h3>
     <ul class="this-page-menu">
@@ -186,6 +204,12 @@ <h3>Navigation</h3>
         <li class="right" >
           <a href="../py-modindex.html" title="Python Module Index"
              >modules</a> |</li>
+        <li class="right" >
+          <a href="Home.html" title="pyrimidine: a universal framework for genetic algorithm"
+             >next</a> |</li>
+        <li class="right" >
+          <a href="../index.html" title="Welcome to pyrimidine’s world of genetic algorithm"
+             >previous</a> |</li>
         <li class="nav-item nav-item-0"><a href="../index.html">pyrimidine 1.7 documentation</a> &#187;</li>
         <li class="nav-item nav-item-this"><a href="">Welcome to pyrimidine’s world of genetic algorithm</a></li> 
       </ul>
diff --git a/docs/index.rst b/docs/index.rst
index c473442..5c9a385 100644
--- a/docs/index.rst
+++ b/docs/index.rst
@@ -16,14 +16,7 @@ Welcome to pyrimidine's world of genetic algorithm
    :maxdepth: 2
    :caption: Document
 
-   source/Home
-   source/Install
-   source/Release History
-   source/API Design
-   source/Examples
-   source/Customization
-   source/Helpers
-   source/Media
+   source/index
 
 .. toctree::
    :maxdepth: 1