setup.py

import setuptools

setuptools.setup(
    name="pcr_marker_design",
    version="0.1.0",
    url="https://github.com/PlantandFoodResearch/pcr-marker-design",
    author="John McCallum",
    author_email="john.mccallum@plantandfood.co.nz",
    description="Tools for PCR assay design from NGS variant data",
    long_description=open('README.rst').read(),
    #packages=setuptools.find_packages()
    packages=['pcr_marker_design', 'test'],
    install_requires=['numpy','biopython','primer3-py','setuptools','pytest', \
    'scipy','numpy','requests','bcbio-gff','pybedtools','pyfaidx',\
    'pandas','pysam','cython','pyvcf'],
    scripts=['design_primers.py'],
    classifiers=[
        'Development Status :: Beta',
        'Programming Language :: Python',
        'Programming Language :: Python :: 3',
        'Programming Language :: Python :: 3.4',
        'Programming Language :: Python :: 3.5',
    ],
)