DESCRIPTION

Type: Package
Package: vivaldi
Title: Viral Variant Location and Diversity
Version: 1.0.1
Authors@R: c(
    person("Marissa", "Knoll", role = "aut"),
    person("Katherine", "Johnson", role = "aut"),
    person("Megan", "Hockman", role = "aut"),
    person("Eric", "Borenstein", role = "aut"),
    person("Mohammed", "Khalfan", role = "aut"),
    person("Elodie", "Ghedin", role = "aut"),
    person("David", "Gresham", , "dg107@nyu.edu", role = c("aut", "cre", "cph"))
  )
Description: Analysis of minor alleles in Illumina sequencing data of viral
    genomes. Functions in 'vivaldi' primarily operate on vcf files.
License: MIT + file LICENSE
URL: https://github.com/GreshamLab/vivaldi
BugReports: https://github.com/GreshamLab/vivaldi/issues
Imports:
    dplyr (>= 1.0.2),
    ggplot2 (>= 3.3.2),
    glue (>= 1.4.2),
    magrittr (>= 2.0.1),
    plotly (>= 4.10.0),
    seqinr (>= 4.2-8),
    tidyr (>= 1.1.2),
    tidyselect (>= 1.1.2),
    vcfR (>= 1.12.0)
Suggests: 
    kableExtra,
    knitr,
    rmarkdown,
    testthat (>= 3.0.0)
VignetteBuilder: 
    knitr
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
Config/testthat/edition: 3
Depends: 
    R (>= 2.10)