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Update README.md
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nbessoltane authored Nov 5, 2023
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| Cours | Intervenants | Supports |
|----------------------------------|------------------|----------|
| Introduction & Processing Post-Alignement | Nadia Bessoltane & Gabriele Adam |[pdf](https://github.com/IFB-ElixirFr/EBAII/blob/master/2022/ebaiin1/DNAseq/1-Intro_Processing-Post-Alignement.pptx.pdf) [gslides](https://docs.google.com/presentation/d/1Z9HlepuI017lGUkFlpwLxdvx4QARG1RQ/) |
| Variant calling & Annotation | Nadia Bessoltane | [pdf](https://github.com/IFB-ElixirFr/EBAII/blob/master/2022/ebaiin1/DNAseq/2-Variant-calling_Annotation.pptx.pdf) [gslides](https://docs.google.com/presentation/d/1JJffLPchxxhy1SFIi-0UedWvn5-n9VgK/) |
| Variants structuraux | Gabriele Adam | [pdf](https://github.com/IFB-ElixirFr/EBAII/blob/master/2022/ebaiin1/DNAseq/3-Variants-Structuraux.pptx.pdf) [gslides](https://docs.google.com/presentation/d/1tJn2-RMWkn7nLrcOubJPvMKx9A8WT2KP/) |
| manipulation et visualisation de données avec R | Nadia Bessoltane | [pdf](https://github.com/IFB-ElixirFr/EBAII/blob/master/2022/ebaiin1/DNAseq/4-Manipuler_table_sourR.pptx.pdf) [gslides](https://docs.google.com/presentation/d/1oOiJfcdnbIaY3G3F_CI-1nt-Op0W0aR8/) |
| Analyse de variants avec R | Nadia Bessoltane | [pdf](https://github.com/IFB-ElixirFr/EBAII/blob/master/2022/ebaiin1/DNAseq/5-Manipuler_VCF_sourR.pptx.pdf) [gslides](https://docs.google.com/presentation/d/10W-EipRAc6146UZwVIRQCvS3Riau3QO4/) [html](https://github.com/IFB-ElixirFr/EBAII/blob/master/2022/ebaiin1/DNAseq/RMD/2022_ebaiin1_variant_analysis.html) [data](https://github.com/IFB-ElixirFr/EBAII/blob/master/2022/ebaiin1/DNAseq/RMD/data)|
| Workflow et conclusion | Nadia Bessoltane & Gabriele Adam | [pdf](https://github.com/IFB-ElixirFr/EBAII/blob/master/2022/ebaiin1/DNAseq/6-Workflow_Conclusion.pptx.pdf) [gslides](https://docs.google.com/presentation/d/1-nON-453OfocMrXJ95fMc-JaU9KRcNnB/) |
| Introduction & Processing Post-Alignement | Nadia Bessoltane & Gabriele Adam |[pdf](https://github.com/IFB-ElixirFr/EBAII/blob/master/2022/ebaiin1/DNAseq/1-Intro_Processing-Post-Alignement.pptx.pdf) [gslides](https://docs.google.com/presentation/d/1TmylGlCwIXgyBpzdn95jo-vFthSqrJtj/edit#slide=id.g184d08c87da_0_0) |
| Variant calling & Annotation | Nadia Bessoltane | [pdf](https://github.com/IFB-ElixirFr/EBAII/blob/master/2022/ebaiin1/DNAseq/2-Variant-calling_Annotation.pptx.pdf) [gslides](https://docs.google.com/presentation/d/1YGjWmcLP-ssMXDUNfHKtca36frGIcFbZ/) |
| Variants structuraux | Gabriele Adam | [pdf](https://github.com/IFB-ElixirFr/EBAII/blob/master/2022/ebaiin1/DNAseq/3-Variants-Structuraux.pptx.pdf) [gslides](https://docs.google.com/presentation/d/1efLJfp4QCf01Ilgeu2Btarrqka4fJ2PO/) |
| manipulation et visualisation de données avec R | Nadia Bessoltane | [pdf](https://github.com/IFB-ElixirFr/EBAII/blob/master/2022/ebaiin1/DNAseq/4-Manipuler_table_sourR.pptx.pdf) [gslides](https://docs.google.com/presentation/d/1ctLosXzfbQ0kdAwB1IMdVhPvjydVmx_N/) |
| Analyse de variants avec R | Nadia Bessoltane | [pdf](https://github.com/IFB-ElixirFr/EBAII/blob/master/2022/ebaiin1/DNAseq/5-Manipuler_VCF_sourR.pptx.pdf) [gslides](https://docs.google.com/presentation/d/1GaeadOoFaYCXdpo7dZ2E5ms8_oN_z50S/) [html](https://github.com/IFB-ElixirFr/EBAII/blob/master/2022/ebaiin1/DNAseq/RMD/2023_ebaiin1_variant_analysis.html) [data](https://github.com/IFB-ElixirFr/EBAII/blob/master/2022/ebaiin1/DNAseq/RMD/data)|
| Workflow et conclusion | Nadia Bessoltane & Gabriele Adam | [pdf](https://github.com/IFB-ElixirFr/EBAII/blob/master/2022/ebaiin1/DNAseq/6-Workflow_Conclusion.pptx.pdf) [gslides](https://docs.google.com/presentation/d/1qeZMbL0b7d0nXc0chVVepEGT13ud749p/) |


### Croisement et intégration des données
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