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The tool uses GFF files to extract gene-names and -features in order to annotate differentially expressed genes. This step is not mandatory in order to analyse data with DESeq and caused many issues with the tool in the past due to the high variability among GFF files. Also sometimes, a user might not be able to acquire a GFF at all. It makes sense to change the upload of the GFF file from a mandatory to an optional argument.
The text was updated successfully, but these errors were encountered:
The tool uses GFF files to extract gene-names and -features in order to annotate differentially expressed genes. This step is not mandatory in order to analyse data with DESeq and caused many issues with the tool in the past due to the high variability among GFF files. Also sometimes, a user might not be able to acquire a GFF at all. It makes sense to change the upload of the GFF file from a mandatory to an optional argument.
The text was updated successfully, but these errors were encountered: