-
Notifications
You must be signed in to change notification settings - Fork 0
/
index.html
342 lines (295 loc) · 17.3 KB
/
index.html
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<meta content="width=device-width, initial-scale=1.0" name="viewport">
<title>Emily Buckley Van Buren's Website </title>
<meta content="" name="description">
<meta content="" name="keywords">
<!-- Favicons -->
<link href="assets/img/favicon.png" rel="icon">
<link href="assets/img/apple-touch-icon.png" rel="apple-touch-icon">
<!-- Google Fonts -->
<link href="https://fonts.googleapis.com/css?family=Open+Sans:300,300i,400,400i,600,600i,700,700i|Raleway:300,300i,400,400i,500,500i,600,600i,700,700i|Poppins:300,300i,400,400i,500,500i,600,600i,700,700i" rel="stylesheet">
<!-- Vendor CSS Files -->
<link href="assets/vendor/aos/aos.css" rel="stylesheet">
<link href="assets/vendor/bootstrap/css/bootstrap.min.css" rel="stylesheet">
<link href="assets/vendor/bootstrap-icons/bootstrap-icons.css" rel="stylesheet">
<link href="assets/vendor/boxicons/css/boxicons.min.css" rel="stylesheet">
<link href="assets/vendor/glightbox/css/glightbox.min.css" rel="stylesheet">
<link href="assets/vendor/swiper/swiper-bundle.min.css" rel="stylesheet">
<!-- Template Main CSS File -->
<link href="assets/css/style.css" rel="stylesheet">
<!-- =======================================================
* Template Name: iPortfolio - v3.5.0
* Template URL: https://bootstrapmade.com/iportfolio-bootstrap-portfolio-websites-template/
* Author: BootstrapMade.com
* License: https://bootstrapmade.com/license/
======================================================== -->
</head>
<body>
<!-- ======= Mobile nav toggle button ======= -->
<i class="bi bi-list mobile-nav-toggle d-xl-none"></i>
<!-- ======= Header ======= -->
<header id="header">
<div class="d-flex flex-column">
<div class="profile">
<img src="assets/img/profile-img.jpg" alt="" class="img-fluid rounded-circle">
<h1 class="text-light"><a href="index.html">Emily Van Buren</a></h1>
<div class="social-links mt-3 text-center">
<a href="https://twitter.com/Emily_VanBuren" class="twitter"><i class="bx bxl-twitter"></i></a>
<a href="#" class="instagram"><i class="bx bxl-instagram"></i></a>
<a href="https://www.linkedin.com/in/emily-buckley/" class="linkedin"><i class="bx bxl-linkedin"></i></a>
</div>
</div>
<nav id="navbar" class="nav-menu navbar">
<ul>
<li><a href="#hero" class="nav-link scrollto active"><i class="bx bx-home"></i> <span>Home</span></a></li>
<li><a href="#about" class="nav-link scrollto"><i class="bx bx-user"></i> <span>About</span></a></li>
<li><a href="#resume" class="nav-link scrollto"><i class="bx bx-file-blank"></i> <span>Resume</span></a></li>
<li><a href="#outreach" class="nav-link scrollto"><i class="bx bx-server"></i> <span>Outreach</span></a></li>
<li><a href="#contact" class="nav-link scrollto"><i class="bx bx-envelope"></i> <span>Contact</span></a></li>
</ul>
</nav><!-- .nav-menu -->
</div>
</header><!-- End Header -->
<!-- ======= Hero Section ======= -->
<section id="hero" class="d-flex flex-column justify-content-center align-items-center">
<div class="hero-container" data-aos="fade-in">
<h1>Emily Van Buren </h1>
<p>I study <span class="typed" data-typed-items="innate immunity, coral health, gene regulatory networks, disease fate"></span></p>
</div>
</section><!-- End Hero -->
<main id="main">
<!-- ======= About Section ======= -->
<section id="about" class="about">
<div class="container">
<div class="section-title">
<h2>About</h2>
<p>I am a fifth year PhD Student in the Mydlarz lab at the University of Texas at Arlrington. The goal of my research is to identify the immune system responses in coral host and symbionts based on pathogen exposure using computational biology and machine learning apporaches. Through this objective, novel applications of machine learning methods on non-model organisms will be produced as well as identification of gene regulatory networks and biomarkers that are biologically significant for pathogen challenged hosts, pathogen challenged symbionts and host-symbiont establishment. </p>
</div>
<div class="row">
<div class="col-lg-4" data-aos="fade-right">
<img src="assets/img/profile-img.jpg" class="img-fluid" alt="">
</div>
<div class="col-lg-8 pt-4 pt-lg-0 content" data-aos="fade-left">
<h3>PhD Student - Fifth Year.</h3>
<p class="fst-italic">
The type of pathogen challenge and disease fate correlated to a coral holobiont will result in a specified innate immune response due to the host immune system repertoire, symbiont’s immune system repertoire, and the host and symbiont relationship.
</p>
<div class="row">
<div class="col-lg-6">
<ul>
<li><i class="bi bi-chevron-right"></i> <strong>Lab Website:</strong> <span>http://www.themydlarzlab.com/</span></li>
<li><i class="bi bi-chevron-right"></i> <strong>City:</strong> <span>Arlington, TX</span></li>
</ul>
</div>
<div class="col-lg-6">
<ul>
<li><i class="bi bi-chevron-right"></i> <strong>Email:</strong> <span>[email protected]</span></li>
<li><i class="bi bi-chevron-right"></i> <strong>Highest Earned Degree:</strong> <span>Masters</span></li>
</ul>
</div>
</div>
<p> AIMS OF DISSERTATION </p>
<ul>
<li>1. Investigation of Melanin Cascade in Cnidarians using various computational biology approaches</li>
<li>2. Identify Coral & Symbiont Transcript Biomarkers that Classify Disease Lesion Using Machine Learning Approaches. </li>
<li>3. Identify Coral Genetic & Phenotypic Variables that Predict Holobiont Disease Resistance Using Machine Learning Approaches </li>
</ul>
</div>
</div>
</div>
</section><!-- End About Section -->
<!-- ======= Facts Section ======= -->
<section id="facts" class="facts">
<div class="container">
<div class="section-title">
<h2>Facts</h2>
<p></p>
</div>
<div class="row no-gutters">
<div class="col-lg-3 col-md-6 d-md-flex align-items-md-stretch" data-aos="fade-up">
<div class="count-box">
<i class="bi bi-emoji-smile"></i>
<span data-purecounter-start="0" data-purecounter-end="5" data-purecounter-duration="1" class="purecounter"></span>
<p><strong>Undergraduates mentored</strong> from UTA </p>
</div>
</div>
<div class="col-lg-3 col-md-6 d-md-flex align-items-md-stretch" data-aos="fade-up" data-aos-delay="100">
<div class="count-box">
<i class="bi bi-journal-richtext"></i>
<span data-purecounter-start="0" data-purecounter-end="3" data-purecounter-duration="1" class="purecounter"></span>
<p><strong>Papers</strong> in prep </p>
</div>
</div>
<div class="col-lg-3 col-md-6 d-md-flex align-items-md-stretch" data-aos="fade-up" data-aos-delay="200">
<div class="count-box">
<i class="bi bi-headset"></i>
<span data-purecounter-start="0" data-purecounter-end="5" data-purecounter-duration="10" class="purecounter"></span>
<p><strong>Conference Presentations & Posters</strong> </p>
</div>
</div>
</div>
</div>
</section><!-- End Facts Section -->
<!-- ======= Resume Section ======= -->
<section id="resume" class="resume">
<div class="container">
<div class="section-title">
<h2>Resume</h2>
<p>A snapshot of revelant education and professional experience</p>
</div>
<div class="row">
<div class="col-lg-6" data-aos="fade-up">
<h3 class="resume-title">Sumary</h3>
<div class="resume-item pb-0">
<h4>Emily Van Buren</h4>
<p><em>Innovative and deadline-driven Bionformatician with 5+ years of experience completing transcriptomic based immunology projects for academic institutions.</em></p>
<ul>
<li>Arlington, TX </li>
<li>[email protected]</li>
</ul>
</div>
<h3 class="resume-title">Education</h3>
<div class="resume-item">
<h4>Doctor of Philosphy - Quantitative Biology</h4>
<h5>2020- Present</h5>
<p><em>University of Texas at Arlington, Arlington, TX</em></p>
<p>Memebr of Mydlarz Lab focused on bioinformatic, computation biology and machine learning techniques to answer questions about innate immune gene regulatory networks and biomarkers associated with Stony Coral Tissue Loss Disease and White Plague disease. </p>
</div>
<div class="resume-item">
<h4>Master of Science - Bioinformatics and Computational Biology</h4>
<h5>2018 - 2019</h5>
<p><em>University of South Florida, Tampa, FL</em></p>
<p>Master's Students in the Kami Kim Lab at USF. Focued on creating transcriptomic pipelines for Toxoplasma gondii drug target research into AP2. Student Contractor at USGS under Chris Kellogg implementing microbiome analysis in coral depth studies.</p>
</div>
<div class="resume-item">
<h4>Bachelor of Science- Biology</h4>
<h5>2015 - 2018</h5>
<p><em>University of South Florida Sarasota-Manatee, Sarasota, FL</em></p>
<p>Undergraduate program focused on marine and genetic research. </p>
</div>
</div>
<div class="col-lg-6" data-aos="fade-up" data-aos-delay="100">
<h3 class="resume-title">Professional Experience</h3>
<div class="resume-item">
<h4>Graduate Teaching Assistant</h4>
<h5>2020 - Present</h5>
<p><em>BIOL 2048L: Anatomy and Physiology Lab 2 </em></p>
<ul>
<li>Lead day to day laboratory for Anatomy and Physiology 2 classes</li>
<li>Review major human systems such as Cardiovascular system, Respiratory System, Digestive System, Urinary System and Reproductive System </li>
<li>Supervise and grade all assignments and examinations for 100+ students each semester </li>
<li>Oversee office hours and review sessions for students</li>
</ul>
</div>
<div class="resume-item">
<h4>National Science Foundation Research Undergraduate Experience</h4>
<h5>2017 </h5>
<p><em>Mote Marine Laboratory and Aquarium, Sarasota, FL</em></p>
<ul>
<li>Adapted ferrozine method for nanomolacular idetnification of Iron (Fe3+ and Fe2+) in 25cm and 75cm LWCC </li>
<li>Completed 2 research cruises under Dr. Jordon Beckler (Mote) and Dr. Martial Taillefert (Georgia Insitute of Technology)</li>
<li>Managment of CTD equipement during response missions and research cruises</li>
</ul>
</div>
</div>
</div>
</div>
</section><!-- End Resume Section -->
<!-- ======= Outreach Section ======= -->
<section id="outreach" class="outreach">
<div class="container">
<div class="section-title">
<h2>Outreach</h2>
<p>As a members of the Mydlarz lab, I am active in outreach and teaching. Lab members participate in many activities in the community and share their passion for coral reefs, the oceans and science in general. In my personal time, I also participate in volutneer work with the Girl Scouts. Having been a member for 2 decades, I have worked on contiuing the mission of the Girl Scouts by building girls and women of courage, confidence, and character, who make the world a better place. </p>
</div>
<div class="row">
<div class="col-lg-4 col-md-6 icon-box" data-aos="fade-up">
<div class="icon"><i class="bi bi-briefcase"></i></div>
<h4 class="title"><a href="">Helen Storry Seminar 2017</a></h4>
<p class="description">USA Representative for an introductory level international leadership development seminar that explored environmental issues of today and focuses on ways to raise awareness and use practical skills to create meaningful and sustainable change in the participant’s sphere of influence.</p>
</div>
<div class="col-lg-4 col-md-6 icon-box" data-aos="fade-up" data-aos-delay="100">
<div class="icon"><i class="bi bi-card-checklist"></i></div>
<h4 class="title"><a href="">Global Leadership Pool Member</a></h4>
<p class="description">Girl Scouts of the United States of America from 2016-2022</p>
</div>
<div class="col-lg-4 col-md-6 icon-box" data-aos="fade-up" data-aos-delay="200">
<div class="icon"><i class="bi bi-bar-chart"></i></div>
<h4 class="title"><a href="">Gold Award Liaison</a></h4>
<p class="description">Mentor to Girl Scouts working on obtaining their Gold Award. The Gold Award tackle issues that are dear to them and drive lasting change in their communities and beyond and is the highest honor a Girl Scout can obtain. </p>
</div>
</div>
</div>
</section><!-- Outreach Section -->
<!-- ======= Contact Section ======= -->
<section id="contact" class="contact">
<div class="container">
<div class="section-title">
<h2>Contact</h2>
<p>If you wish to get in contact please email [email protected] or fill out the the form below. Thank you. </p>
</div>
<div class="col-lg-7 mt-5 mt-lg-0 d-flex align-items-stretch">
<form action="forms/contact.php" method="post" role="form" class="php-email-form">
<div class="row">
<div class="form-group col-md-6">
<label for="name">Your Name</label>
<input type="text" name="name" class="form-control" id="name" required>
</div>
<div class="form-group col-md-6">
<label for="name">Your Email</label>
<input type="email" class="form-control" name="email" id="email" required>
</div>
</div>
<div class="form-group">
<label for="name">Subject</label>
<input type="text" class="form-control" name="subject" id="subject" required>
</div>
<div class="form-group">
<label for="name">Message</label>
<textarea class="form-control" name="message" rows="10" required></textarea>
</div>
<div class="my-3">
<div class="loading">Loading</div>
<div class="error-message"></div>
<div class="sent-message">Your message has been sent. Thank you!</div>
</div>
<div class="text-center"><button type="submit">Send Message</button></div>
</form>
</div>
</div>
</div>
</section><!-- End Contact Section -->
</main><!-- End #main -->
<!-- ======= Footer ======= -->
<footer id="footer">
<div class="container">
<div class="copyright">
© Copyright <strong><span>iPortfolio</span></strong>
</div>
<div class="credits">
<!-- All the links in the footer should remain intact. -->
<!-- You can delete the links only if you purchased the pro version. -->
<!-- Licensing information: https://bootstrapmade.com/license/ -->
<!-- Purchase the pro version with working PHP/AJAX contact form: https://bootstrapmade.com/iportfolio-bootstrap-portfolio-websites-template/ -->
Designed by <a href="https://bootstrapmade.com/">BootstrapMade</a>
</div>
</div>
</footer><!-- End Footer -->
<a href="#" class="back-to-top d-flex align-items-center justify-content-center"><i class="bi bi-arrow-up-short"></i></a>
<!-- Vendor JS Files -->
<script src="assets/vendor/aos/aos.js"></script>
<script src="assets/vendor/bootstrap/js/bootstrap.bundle.min.js"></script>
<script src="assets/vendor/glightbox/js/glightbox.min.js"></script>
<script src="assets/vendor/isotope-layout/isotope.pkgd.min.js"></script>
<script src="assets/vendor/php-email-form/validate.js"></script>
<script src="assets/vendor/purecounter/purecounter.js"></script>
<script src="assets/vendor/swiper/swiper-bundle.min.js"></script>
<script src="assets/vendor/typed.js/typed.min.js"></script>
<script src="assets/vendor/waypoints/noframework.waypoints.js"></script>
<!-- Template Main JS File -->
<script src="assets/js/main.js"></script>
</body>
</html>