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This repository has been archived by the owner on May 18, 2023. It is now read-only.

Releases: JeffersonLab/clas12-offline-software

COATJAVA 8.2.4

19 Aug 03:20
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Requires Java 11 or later. Compatible with GEMC 4.4.2 and 5.0.

  • Decoding
    • add support for CCDB timestamp
    • when EVIO is missing a HEAD bank, e.g. scaler events, trigger bits were being inherited from the previous event ... stop doing that
    • remove outdated, commented-out code and old, unused/nonfunctional/test classes, and address IDE warnings
  • Common-tools:
    • add trigger-bit filtering functionality to the ReconstructionEngine class to allow processing of events with specific triggers
  • EB
    • fix REC::UTrack to really have unconstrained tracks, previously they were constrained
  • Postprocessing
    • add delay-corrected helicity to HEL::scaler and populate REC::Event.rawHelicity
  • General
    • initialize logger at (many) more entry points
  • Build
    • update to maven-javadoc-plugin version 3.4.0, necessary for modern JDK versions

Commits since 8.2.2

Download prebuilt tarball from clasweb.

COATJAVA 8.2.2

04 Aug 21:35
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Requires Java 11 or later. Compatible with GEMC 4.4.2 and 5.0.

  • fix bug in EVIO->HIPO decoding that was dropping the last event in each EVIO file
  • add REC::UTrack and CVT::UTracks banks to appropriate schemas

Commits since 8.2.1

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COATJAVA release 8.2.1

23 Jul 23:52
ec85842
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Requires Java 11 or later. Compatible with GEMC 4.4.2 and 5.0.

Release for Pass2 re-calibrations.

  • DC
    • Fixed bug in geometry introduced in 8.1.2, with left end-point of the wire being overwritten by midpoint
    • Set polynomial time-to-distance function to be the default
  • RTPC
    • New 6-dimensional Kalman filter implementation and energy loss corrections based on clas-tracking Material class
  • Other
    • Updated DC alignment yaml file for no endplate bowing
    • Add RASTER banks to schemas

Commits since 8.2.0

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COATJAVA release 8.2.0

15 Jul 16:38
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Requires Java 11 or later. Compatible with GEMC 4.4.2 and 5.0.

Release for Pass2 re-calibrations.

  • CTOF: implement new discrete position-dependent correction to time (aka HPOSBIN)
  • DC:
    • Implementation of pressure-dependent corrections to time-to-distance
    • New time-walk correction based on DOCA
    • Fix to time-to-distance interpolation
    • Fix to iso-chrones twist due to magnetic field
    • Apply jitter correction to TDC
    • Remove deprecated yaml variable
    • See related studies and validation here
  • Other:
    • Remove unnecessary settings in yaml files
    • Switch to Jan. 2021 torus field map in yaml files for real data processing

Commits since 8.1.2

COATJAVA release 8.1.2

28 Jun 18:52
54de2eb
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Requires Java 11 or later. Compatible with GEMC 4.4.2 and 5.0.

  • CND: updated to read first-pass CVT banks to fill track information in CND::hits
  • Raster: removed method to create RASTER::adc bank from generated particle vertex
  • Common-tools: added DataManager to read physics events from hipo event

Commits since 8.1.1

COATJAVA release 8.1.1

21 Jun 20:20
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Requires Java 11 or later. Compatible with GEMC 4.4.2 and 5.0.

  • Raster:
    • Fix bug in x/y component numbers in RasterEngine
    • Restor raster correction in CVT, after accidental removal during previous merge
    • Beam spot in DC and CVT now defined as the sum of the beam offset from CCDB and the reconstructed raster position
  • FTT
    • Fix bug in module indices used in FT::Particle
    • Bypass hit timing cuts for MC events.
  • Bank chema
  • move RAW::vtp from mon to calib

Commits since 8.1.0

COATJAVA release 8.1.0

11 Jun 01:24
4c1b647
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Requires Java 11 or later. Compatible with GEMC 4.4.2 and 5.0.

  • Add RG-C raster support
  • Add RG-F AI networks
  • Add FTT reconstruction
  • Add helicity decoder board in HEL::decoder bank
  • Add new, preliminary VTX vertexing service
  • CVT
    • energy loss corrections based on EB pid and Bethe-Bloch
      • add second pass tracking for energy loss in Kalman filter
      • service refactoring, splitting, renaming to minimize refitting
      • use new geometry material tables from CCDB
    • singletonize constants management from CCDB across all CVT services
    • store covariance matrix bank in cartesian coordinates
    • preserve both beamline-constrained and unconstrainted tracks
      • unit bugfix in beamline constraint
    • fix hit time assignment for SVT
    • finalize Lorentz angle corrections
    • various trajectory improvements
      • bugfixes
      • add all surfaces, active and passive
      • add dx (for dE/dx) to trajectory bank
      • save Kalman Filter smoothed and filtered residuals
    • Kalman filter smoothing
    • tuning of covariance matrix initialization values
    • yaml variables cleanup
  • DC
    • default to polynomial for time-to-distance
    • remove roads services, now moved to common-tool package
  • RTPC
    • z-alignment applied from CCDB
    • update disentangler and helix fit
  • RICH
    • switch to new hardware translation table for two RICHes
  • EB
    • add REC::UTrack and AI counterparts
    • add RECFT::Particle.px/py/pz
    • use beamspot in calculating CVT track vertex from helix parameters
    • move CI tests to GEMC 5.0
  • Common-tools
    • new org.jlab.analysis.roads package with restructured tools for generation, validation and merging
    • disable truth matching service in recon-util
    • recon-util now updates schema on-the-fly, i.e., hipo-utils -update is no longer necessary for GEMC 5.0's HIPO output
    • added option to skip events in recon-util
    • magfield transformation caching optimization for tilted-sector coordinate system
    • initialize logger at all entry points
    • move to groot 4.0.3
  • Miscellaneous
    • various cleanup
    • address many maven warnings, e.g. missing encodings and plugin versions
    • build system cleanup: remove duplications and unnecessary dependencies
    • try python if python3 doesn't exist in schema generator
    • add MLTN dependencies to uber jar and remove MLTN sub-uber jar, to conform with all other packages

Commits since 8.0.0

COATJAVA release 8.0.0

22 Mar 00:58
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Compatible with GEMC 4.4.2
Requires Java 11 or later
Major version bump is due to backward incompatibility with HIPO histogram files generated prior to GROOT 4.0.0

  • Reconstruction
    • BAND
      • Updated hit class, including x offset for short bars
    • CVT
      • New, fully restructured, CVT reconstruction based on dedicated tracking package containing a generic Kalman Filter
      • Support for straight and helical tracks reconstruction
      • Full support for alignment using the KF approach
      • Functionality for tracking analysis and debugging, utilizing layer exclusion in seeding and tracking
      • Geometry updates for alignment with geometry objects transformations
      • New BMT geometry class, using constants read from CCDB, including new material table
      • YAML variable beamSpotConst to control usage of beam spot information in seeding and KF (0: no constraint, 1: constraint in seeding only, 2: constraint in both seeding and KF)
      • New CVTRec::Seeds bank for track candidates
    • DC
      • Fixed track-overlap remover to account for cases in which track chi2 is the same
    • EB
      • Include (x,y) coordinates of helix reference point in calculating CVT track vertex from helical representation parameters
  • Common tools
    • clas-jcsg
      • Updated RICH geometry according to latest CAD drawings to address overlaps detected in GEMC
    • clas-reco
      • Evio2Hipo: added BAND
    • clas-tracking
      • New package supporting Kalman-Filter-based tracking for helical and straight tracks for a generic detector
      • Includes Surface and Measurement classes to encode detector geometry and hit/cluster information
      • Supports usage of different matrix libraries
  • Build
    • Upgrade to groot-4.0
    • Clean-up of pom files and build script and move to single parent pom.xml
    • Fixed issue with JAXB implementation after Java 8
  • Miscellaneous
    • Propagating settings for Java logger to various packages and tools

Commits since 7.1.0

COATJAVA release 7.1.0

19 Dec 22:04
7b46ce0
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Compatible with GEMC 4.4.2
Required Java 11 or later

  • Reconstruction:
    • DC:
      • Full restructuring for integration of AI-assisted tracking:
        • Standalone clustering service to be run before hit-based tracking.
        • Conventional hit-based service, starting from clustering output.
        • AI hit-based service, starting from AI predictions in ai::tracks.
        • Hit-based services now output new HitBasedTrkg::..HitTrkId bank with track-dependent information (track ID, TProp, TBeta, ...)
        • DCTBEngine rebuilds full hit information from HitBasedTrkg::..Hits and HitBasedTrkg::..HitTrkId banks. Extended to DCTBAIEngine for AI tracking.
        • Mechanism to select engine output bank names between conventional and AI.
      • Additional changes:
        • Constants class turned into a singleton to ensure all DC engines use the same configuration. Geometry factories now members of Constants class. Cleanup of unused constants. New initialization method.
        • T0 Table now read with ConstantsManager.
        • Added cluster IDs to Track bank.
        • New method for consistent assignment of track-dependent information to hits and subsequent updates.
        • TB tracking now rejects hits with not track-related information after HB.
        • New track overlap remover method now handles three-way overlaps.
        • Removal of duplicated clusters created to address the LR ambiguity.
        • Fix issues with cross and tracks duplication, removed unnecessary hit cloning.
        • New yaml variable to support choice of output bank names, switch off 5SL tracking, select one sector., turn on/off realignment of time information to hit doublets (off by default). Cleaner printouts of selected configuration. Configuration via environment variables removed.
    • EC: default reporting planes for ECinner and ECouter updated.
    • EB:
      • EBHBAI and EBTBAI engines to support parallel running of conventional and AI tracking.
      • Removed CTOF-CND veto from neutral PID assignment.
      • Cloning DetectorResponses to preserve track-related info in case of multiple associations.
    • FMT:
      • Use swimming to calculate DC track intersections instead of using values from DC trajectory bank: allows for iteration on FMT alignments without re-running the DC service.
      • Added timing cut to select good hits, excluding t==0 to preserve MC hits.
      • Merged FittedHit functionalities into Hit class.
    • MLTN:
      • New package providing the AI track inference information: includes classifier network to 6SL track identification and fixer network to predict missing layer for 5SL tracks.
      • Reads output of DC clustering engine and provide track candidate predictions in ai::tracks bank. Bank includes list of clusters, particle charge, z vertex and probability.
      • Relies on Archive class to handle multiple networks.
      • Supports network choice based on run and flavor.
      • Yaml option to read neural network file from path for testing purposes.
  • Common-tools:
    • EngineProcessor updated to include new DC clustering service in default configuration.
    • New clas-logging package implementing java Logger, supporting different verbosity levels. Several classes in common-tools and reconstruction switched to Logger. Logging property files included as resources. Currently results in highest verbosity for reconstruction engines when run in Clara and for groovy scripts.
    • Post-processing supports overall helicity flip also or direct reporting.
  • Other:
    • Updated DC and EB bankdefs json files to include AI banks.
    • Updated yaml files with examples on how to run conventional and AI-assisted tracking.
    • AI-assisted tracking neural net file with networks for RG-A Spring18, RG-A Fall18, RG-B Spring19
    • Advanced KPP test now checked both conventional and AI tracking results.
    • Switched all bin scripts to serial-GC.

Commits since 7.0.1

COATJAVA release 7.0.1

12 Nov 20:11
be8353e
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Compatible with GEMC 4.4.1
Requires Java 11 or later

  • Reconstruction
    • DC:
      • Road dictionary: the dictionary validation tool, dict-validate, updated to handle sector-dependent roads, extended command-line options, dictionary merger tool, dict-merger, fixed to account for road format changes.
    • ECAL:
      • new algorithm to handle single and double peak merging for partially overlapping clusters.
      • EC reporting planes updated for more accurate time reconstruction in MC.
    • EB:
      • RUN::rf is rebuilt from raw TDC if RF::tdc bank is present, to avoid loss of precision in float-to-double conversion.
      • Use now FTOF clusters instead of hits.
    • FMT:
      • First version of FMT reconstruction based on Kalman-Filter processing of DC tracks matched to FMT clusters.
      • Handles FMT misalignment.
    • FTOF:
      • Updated clustering algorithm with energy defined as the sum of the hit energies and the time set to the seed time.
    • All: use status tables to knock-out malfunctioning elements.
  • Common-tools:
    • ConstantsManager now supports 4-indices tables.
    • Helicity: accommodate for no states found.
    • IO: DataProcessorPanel allows for setting default ET host and IP.
    • ReconstructionEngine: added drop-banks option.
    • Swimmer:
      • swimToCylinder now supported in both old and new adaptive swimmers.
      • support to solenoid and transverse fields.
  • Other:
    • Nightly Travis build added. (Already had one on CUE).
    • Switched to more reliable freehep maven URL.
    • Removed deletion of local maven repository from build script.
    • Clean-up of stdout logging for all packages.

Commits since 6.6.5