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Makefile
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sim: main_moments.cpp solve_odes.cpp fire_pulse.cpp scramble.cpp absorb.cpp find_clusters.cpp find_cluster_moments.cpp
g++ -o sim -O3 main_moments.cpp solve_odes.cpp fire_pulse.cpp scramble.cpp absorb.cpp find_clusters.cpp find_cluster_moments.cpp -I.
del: main_delay.cpp solve_odes_with_delay.cpp fire_pulse_with_delay.cpp scramble.cpp absorb.cpp find_clusters.cpp find_cluster_moments.cpp
g++ -o del -O3 main_delay.cpp solve_odes_with_delay.cpp fire_pulse_with_delay.cpp scramble.cpp absorb.cpp find_clusters.cpp find_cluster_moments.cpp -I.
clusters: main_clusters.cpp solve_odes.cpp find_and_write_clusters.cpp
g++ -o clus -O3 main_clusters.cpp solve_odes.cpp find_and_write_clusters.cpp -I.
count: main_count_firing_rates.cpp count_firing_rates.cpp find_clusters.cpp find_cluster_moments.cpp
g++ -o count main_count_firing_rates.cpp count_firing_rates.cpp find_clusters.cpp find_cluster_moments.cpp -I.
ens: main_ensemble.cpp solve_odes_ensemble.cpp find_clusters.cpp find_cluster_moments.cpp
g++ -o ens -O3 main_ensemble.cpp solve_odes_ensemble.cpp find_clusters.cpp find_cluster_moments.cpp -I.
ens1: main_ensemble1.cpp solve_odes_ensemble1.cpp find_clusters.cpp find_cluster_moments.cpp
g++ -o ens1 main_ensemble1.cpp solve_odes_ensemble1.cpp find_clusters.cpp find_cluster_moments.cpp -I.
ensfe: main_ensemble_forward_euler.cpp solve_odes_forward_euler.cpp find_cluster_moments.cpp
g++ -o ensfe main_ensemble_forward_euler.cpp solve_odes_forward_euler.cpp find_cluster_moments.cpp -I.
cleanens: main_clean_ensemble.cpp solve_odes_ensemble1.cpp find_clusters.cpp bin_clusters.cpp find_cluster_moments.cpp
g++ -o cleanens main_clean_ensemble.cpp solve_odes_ensemble1.cpp find_clusters.cpp bin_clusters.cpp find_cluster_moments.cpp -I.
hist: main_histogram.cpp solve_odes.cpp make_voltage_histogram.cpp
g++ -o hist main_histogram.cpp solve_odes.cpp make_voltage_histogram.cpp -I.
varyk: main_vary_k.cpp solve_odes_vary_k.cpp find_clusters.cpp find_cluster_moments.cpp
g++ -o varyk main_vary_k.cpp solve_odes_vary_k.cpp find_clusters.cpp find_cluster_moments.cpp -I.
conc: main_concave.cpp solve_odes.cpp find_clusters.cpp find_cluster_moments.cpp
g++ -o conc main_concave.cpp solve_odes.cpp find_clusters.cpp find_cluster_moments.cpp -I.
all: main_ensemble_all_in_one.cpp
g++ -o all main_ensemble_all_in_one.cpp -I.
lc: main_light_cone.cpp solve_odes.cpp find_light_cone.cpp
g++ -o lc -O3 main_light_cone.cpp solve_odes.cpp find_light_cone.cpp -I.