KratosMultiphysics · matekelemen · Nov 8, 2024 · Nov 14, 2024 · Nov 14, 2024 · Nov 14, 2024
@@ -92,43 +92,43 @@ Kratos has been used for simulation of many different problems in a wide variety
 Organizations contributing to Kratos:
 
 <img align="left" src="https://github.com/KratosMultiphysics/Documentation/raw/master/Wiki_files/Logos/CIMNE_logo.png" width="128">
-</br></br><p>International Center for Numerical Methods in Engineering</p>
+<br><br><p>International Center for Numerical Methods in Engineering</p>
 
-</br></br>
+<br><br>
 
 <img align="left" src="https://github.com/KratosMultiphysics/Documentation/raw/master/Wiki_files/Logos/TUM_Logo.png" width="128">
-</br><p>Chair of Structural Analysis</br>Technical University of Munich </p>
+<br><p>Chair of Structural Analysis<br>Technical University of Munich </p>
 
-</br></br>
+<br><br>
 
 <img align="left" src="https://github.com/KratosMultiphysics/Documentation/raw/master/Wiki_files/Logos/altair-sponsor-logo.png" width="128">
-</br><p>Altair Engineering</p>
+<br><p>Altair Engineering</p>
 
 <img align="left" src="https://github.com/KratosMultiphysics/Documentation/raw/master/Wiki_files/Logos/Deltares_logo.png" width="128">
-</br><p>Deltares</p>
+<br><p>Deltares</p>
 
-</br></br>
+<br><br>
 
 <img align="left" src="https://github.com/KratosMultiphysics/Documentation/raw/master/Wiki_files/Logos/TUBraunschweig_logo.svg" width="128">
-<p>Institute of Structural Analysis</br>Technische Universität Braunschweig</p>
+<p>Institute of Structural Analysis<br>Technische Universität Braunschweig</p>
 
-</br></br>
+<br><br>
 
 <img align="left" src="https://github.com/KratosMultiphysics/Documentation/raw/master/Wiki_files/Logos/logo_UNIPD.svg" width="128">
 <p> University of Padova, Italy </p>
 
-</br></br>
+<br><br>
 
 # Our Users
 Some users of the technologies developed in Kratos are:
 
 <span>
 <img align="left" src="https://github.com/KratosMultiphysics/Documentation/raw/master/Wiki_files/Logos/AIRBUS_logo.png" width="128">
-<p>Airbus Defence and Space</br>Stress Methods & Optimisation Department</p>
+<p>Airbus Defence and Space<br>Stress Methods & Optimisation Department</p>
 </span>
 <span>
 <img align="left" src="https://github.com/KratosMultiphysics/Documentation/raw/master/Wiki_files/Logos/siemens_logo.png" width="128">
-<p>Siemens AG</br>Corporate Technology</p>
+<p>Siemens AG<br>Corporate Technology</p>
 </span>
 <span>
 <img align="left" src="https://github.com/KratosMultiphysics/Documentation/raw/master/Wiki_files/Logos/onera_logo.png" width="128">

diff --git a/applications/CSharpWrapperApplication/documents/.gitignore b/applications/CSharpWrapperApplication/documents/.gitignore
@@ -0,0 +1,3 @@
+*
+!.gitignore
+!doxyfile
diff --git a/applications/CSharpWrapperApplication/documents/doxyfile b/applications/CSharpWrapperApplication/documents/doxyfile
@@ -0,0 +1,14 @@
+@INCLUDE               = ../../../documents/doxyfile
+PROJECT_NAME           = KratosMultiphysics - C\# Wrapper
+PROJECT_BRIEF          =
+PROJECT_LOGO           = ../../../documents/kratos_small.png
+LAYOUT_FILE            = ../../../html_layout.xml
+INPUT                  = ..                             \
+                         ../README.md
+EXCLUDE_PATTERNS       = */external_libraries/*         \
+                         */custom_external_libraries/*  \
+                         */tests/* *_test* *test_*
+HTML_EXTRA_STYLESHEET  = ../../../documents/doxygen-awesome.css
+TAGFILES               = ../../../documents/KratosCore.tag=../../../../documents/html
+GENERATE_TAGFILE       = CSharpWrapperApplication.tag
+
diff --git a/applications/CableNetApplication/documents/.gitignore b/applications/CableNetApplication/documents/.gitignore
@@ -0,0 +1,3 @@
+*
+!.gitignore
+!doxyfile
diff --git a/applications/CableNetApplication/documents/doxyfile b/applications/CableNetApplication/documents/doxyfile
@@ -0,0 +1,14 @@
+@INCLUDE               = ../../../documents/doxyfile
+PROJECT_NAME           = KratosMultiphysics - Cable Nets
+PROJECT_BRIEF          =
+PROJECT_LOGO           = ../../../documents/kratos_small.png
+LAYOUT_FILE            = ../../../html_layout.xml
+INPUT                  = ..                             \
+                         ../README.md
+EXCLUDE_PATTERNS       = */external_libraries/*         \
+                         */custom_external_libraries/*  \
+                         */tests/* *_test* *test_*
+HTML_EXTRA_STYLESHEET  = ../../../documents/doxygen-awesome.css
+TAGFILES               = ../../../documents/KratosCore.tag=../../../../documents/html
+GENERATE_TAGFILE       = CableNetApplication.tag
+
@@ -0,0 +1,3 @@
+*
+!.gitignore
+!doxyfile
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+@INCLUDE               = ../../../documents/doxyfile
+PROJECT_NAME           = KratosMultiphysics - Chimera
+PROJECT_BRIEF          =
+PROJECT_LOGO           = ../../../documents/kratos_small.png
+LAYOUT_FILE            = ../../../html_layout.xml
+INPUT                  = ..                             \
+                         ../README.md
+EXCLUDE_PATTERNS       = */external_libraries/*         \
+                         */custom_external_libraries/*  \
+                         */tests/* *_test* *test_*
+HTML_EXTRA_STYLESHEET  = ../../../documents/doxygen-awesome.css
+TAGFILES               = ../../../documents/KratosCore.tag=../../../../documents/html
+GENERATE_TAGFILE       = ChimeraApplication.tag
+
@@ -0,0 +1,3 @@
+*
+!.gitignore
+!doxyfile
@@ -0,0 +1,14 @@
+@INCLUDE               = ../../../documents/doxyfile
+PROJECT_NAME           = KratosMultiphysics - CoSimulation
+PROJECT_BRIEF          = Core developments in coupling black-box solvers and other software-tools within KratosMultiphysics.
+PROJECT_LOGO           = ../../../documents/kratos_small.png
+LAYOUT_FILE            = ../../../html_layout.xml
+INPUT                  = ..                             \
+                         ../README.md
+EXCLUDE_PATTERNS       = */external_libraries/*         \
+                         */custom_external_libraries/*  \
+                         */tests/* *_test* *test_*
+HTML_EXTRA_STYLESHEET  = ../../../documents/doxygen-awesome.css
+TAGFILES               = ../../../documents/KratosCore.tag=../../../../documents/html
+GENERATE_TAGFILE       = CoSimulationApplication.tag
+
@@ -0,0 +1,3 @@
+*
+!.gitignore
+!doxyfile
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+@INCLUDE               = ../../../documents/doxyfile
+PROJECT_NAME           = KratosMultiphysics - Compressible Potential Flow
+PROJECT_BRIEF          =
+PROJECT_LOGO           = ../../../documents/kratos_small.png
+LAYOUT_FILE            = ../../../html_layout.xml
+INPUT                  = ..                             \
+                         ../README.md
+EXCLUDE_PATTERNS       = */external_libraries/*         \
+                         */custom_external_libraries/*  \
+                         */tests/* *_test* *test_*
+HTML_EXTRA_STYLESHEET  = ../../../documents/doxygen-awesome.css
+TAGFILES               = ../../../documents/KratosCore.tag=../../../../documents/html
+GENERATE_TAGFILE       = CompressiblePotentialFlowApplication.tag
+
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+*
+!.gitignore
+!doxyfile
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+@INCLUDE               = ../../../documents/doxyfile
+PROJECT_NAME           = KratosMultiphysics - Constitutive Laws
+PROJECT_BRIEF          =
+PROJECT_LOGO           = ../../../documents/kratos_small.png
+LAYOUT_FILE            = ../../../html_layout.xml
+INPUT                  = ..                             \
+                         ../README.md
+EXCLUDE_PATTERNS       = */external_libraries/*         \
+                         */custom_external_libraries/*  \
+                         */tests/* *_test* *test_*
+HTML_EXTRA_STYLESHEET  = ../../../documents/doxygen-awesome.css
+TAGFILES               = ../../../documents/KratosCore.tag=../../../../documents/html
+GENERATE_TAGFILE       = ConstitutiveLawsApplication.tag
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diff --git a/applications/ConstitutiveModelsApplication/README.md b/applications/ConstitutiveModelsApplication/README.md
@@ -1,12 +1,3 @@
 # Constitutive Models Application
 
-This application is part of the Kratos Multiphysics Platform.
-Instructions on how to update, build and run it on your local machine are available.
-Please contact:
-
 * **Josep Maria Carbonell** - *Core Development* - [[email protected]](mailto:[email protected])
-
-## License
-
-The Pfem application is OPEN SOURCE. The main code and program structure is available and aimed to grow with the need of any user willing to expand it. The BSD (Berkeley Software Distribution) licence allows to use and distribute the existing code without any restriction, but with the possibility to develop new parts of the code on an open or close source depending on the developers.
-
diff --git a/applications/ConstitutiveModelsApplication/documents/.gitignore b/applications/ConstitutiveModelsApplication/documents/.gitignore
@@ -0,0 +1,3 @@
+*
+!.gitignore
+!doxyfile
diff --git a/applications/ConstitutiveModelsApplication/documents/doxyfile b/applications/ConstitutiveModelsApplication/documents/doxyfile
@@ -0,0 +1,14 @@
+@INCLUDE               = ../../../documents/doxyfile
+PROJECT_NAME           = KratosMultiphysics - Constitutive Models
+PROJECT_BRIEF          =
+PROJECT_LOGO           = ../../../documents/kratos_small.png
+LAYOUT_FILE            = ../../../html_layout.xml
+INPUT                  = ..                             \
+                         ../README.md
+EXCLUDE_PATTERNS       = */external_libraries/*         \
+                         */custom_external_libraries/*  \
+                         */tests/* *_test* *test_*
+HTML_EXTRA_STYLESHEET  = ../../../documents/doxygen-awesome.css
+TAGFILES               = ../../../documents/KratosCore.tag=../../../../documents/html
+GENERATE_TAGFILE       = ConstitutiveModelsApplication.tag
+
diff --git a/applications/ContactMechanicsApplication/README.md b/applications/ContactMechanicsApplication/README.md
@@ -1,12 +0,0 @@
-# Contact Mechanics Application
-
-This application is part of the Kratos Multiphysics Platform.
-Instructions on how to update, build and run it on your local machine are available.
-Please contact:
-
-* **Josep Maria Carbonell** - *Core Development* - [[email protected]](mailto:[email protected])
-
-## License
-
-The Pfem application is OPEN SOURCE. The main code and program structure is available and aimed to grow with the need of any user willing to expand it. The BSD (Berkeley Software Distribution) licence allows to use and distribute the existing code without any restriction, but with the possibility to develop new parts of the code on an open or close source depending on the developers.
-

diff --git a/applications/ContactMechanicsApplication/documents/.gitignore b/applications/ContactMechanicsApplication/documents/.gitignore
@@ -0,0 +1,3 @@
+*
+!.gitignore
+!doxyfile
diff --git a/applications/ContactMechanicsApplication/documents/doxyfile b/applications/ContactMechanicsApplication/documents/doxyfile
@@ -0,0 +1,14 @@
+@INCLUDE               = ../../../documents/doxyfile
+PROJECT_NAME           = KratosMultiphysics - Contact Mechanics
+PROJECT_BRIEF          =
+PROJECT_LOGO           = ../../../documents/kratos_small.png
+LAYOUT_FILE            = ../../../html_layout.xml
+INPUT                  = ..                             \
+                         ../README.md
+EXCLUDE_PATTERNS       = */external_libraries/*         \
+                         */custom_external_libraries/*  \
+                         */tests/* *_test* *test_*
+HTML_EXTRA_STYLESHEET  = ../../../documents/doxygen-awesome.css
+TAGFILES               = ../../../documents/KratosCore.tag=../../../../documents/html
+GENERATE_TAGFILE       = ContactMechanicsApplication.tag
+
@@ -0,0 +1,3 @@
+*
+!.gitignore
+!doxyfile
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+@INCLUDE               = ../../../documents/doxyfile
+PROJECT_NAME           = KratosMultiphysics - Contact Mechanics
+PROJECT_BRIEF          =
+PROJECT_LOGO           = ../../../documents/kratos_small.png
+LAYOUT_FILE            = ../../../html_layout.xml
+INPUT                  = ..                             \
+                         ../README.md
+EXCLUDE_PATTERNS       = */external_libraries/*         \
+                         */custom_external_libraries/*  \
+                         */tests/* *_test* *test_*
+HTML_EXTRA_STYLESHEET  = ../../../documents/doxygen-awesome.css
+TAGFILES               = ../../../documents/KratosCore.tag=../../../../documents/html
+GENERATE_TAGFILE       = ContactStructuralMechanicsApplication.tag
+
@@ -1,32 +1,32 @@
- 
-## Convection Diffusion Application  
-  
-The Convection DIffusion Application contains a series of elements and conditions and the corresponding strategies and solvers within Kratos Multiphysics necesaries in order to simulate a convection-diffusion problem.  
- 
-<p align="center"> 
-  <img src="https://raw.githubusercontent.com/KratosMultiphysics/Documentation/master/Readme_files/ConvectionDiffusionApplication.png" alt="Solution" style="width: 600px;"/> 
-</p> 
-  
-The application includes tests to check the proper functioning of the application 
-  
-### Features:  
-  
+
+## Convection Diffusion Application
+
+A set of elements, conditions, strategies and solvers necessary for the solution of convection-diffusion problems.
+
+<p align="center">
+  <img src="https://raw.githubusercontent.com/KratosMultiphysics/Documentation/master/Readme_files/ConvectionDiffusionApplication.png" alt="Solution" style="width: 600px;"/>
+</p>
+
+The application includes tests to check the proper functioning of the application
+
+### Features:
+
 - A set of *Neumann* conditions:
      * Flux conditions
      * Thermal conditions
-    
+
 - Elements:
     * Laplacian element (both 2D/3D)
     * Eulerian convection-diffusion (both 2D/3D)
     * Convection-diffusion (both 2D/3D)
     * Convection-diffusion with change of phase (2D)
     * Explicit eulerian convection-diffusion (both 2D/3D)
-       	
+
 - Strategies:
 	* Non-linear/linear convection-diffusion strategy
 	* Eulerian convection-diffusion strategy
 	* Semi-Eulerian convection-diffusion strategy
-	
+
 - Utilities and others:
 	* BFECC convection utility
 	* BFECC elemental limiter convection utility

@@ -0,0 +1,3 @@
+*
+!.gitignore
+!doxyfile
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+@INCLUDE               = ../../../documents/doxyfile
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+PROJECT_BRIEF          = A set of elements, conditions, strategies and solvers necessary for the solution of convection-diffusion problems.
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+INPUT                  = ..                             \
+                         ../README.md
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+                         */custom_external_libraries/*  \
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+*
+!.gitignore
+!doxyfile
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+@INCLUDE               = ../../../documents/doxyfile
+PROJECT_NAME           = KratosMultiphysics - Discrete Elements
+PROJECT_BRIEF          = A particles method for modeling the bulk behavior of granular materials and many geomaterials such as coal, ores, soil, rocks, aggregates, pellets, tablets and powders.
+PROJECT_LOGO           = ../../../documents/kratos_small.png
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+INPUT                  = ..                             \
+                         ../README.md
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+                         */custom_external_libraries/*  \
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diff --git a/applications/DamApplication/documents/.gitignore b/applications/DamApplication/documents/.gitignore
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+LAYOUT_FILE            = ../../../html_layout.xml
+INPUT                  = ..                             \
+                         ../README.md
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+                         */custom_external_libraries/*  \
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diff --git a/applications/DelaunayMeshingApplication/documents/.gitignore b/applications/DelaunayMeshingApplication/documents/.gitignore
@@ -0,0 +1,3 @@
+*
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+INPUT                  = ..                             \
+                         ../README.md
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+                         */custom_external_libraries/*  \
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diff --git a/applications/DemStructuresCouplingApplication/documents/.gitignore b/applications/DemStructuresCouplingApplication/documents/.gitignore
@@ -0,0 +1,3 @@
+*
+!.gitignore
+!doxyfile
diff --git a/applications/DemStructuresCouplingApplication/documents/doxyfile b/applications/DemStructuresCouplingApplication/documents/doxyfile
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+                         */custom_external_libraries/*  \
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