diff --git a/.github/workflows/run_tests.yml b/.github/workflows/run_tests.yml index 228c71d..9d0eb91 100644 --- a/.github/workflows/run_tests.yml +++ b/.github/workflows/run_tests.yml @@ -26,16 +26,16 @@ jobs: run: ./tests.sh shell: bash - - name: Build Docker image - run: docker build -t wasserth/tractseg_container:master -f Dockerfile_CPU . - - name: Check build dir - run: echo $(pwd) - - name: Run Docker image - run: docker run -v $(pwd)/examples:/data wasserth/tractseg_container:master TractSeg \-i /data/Diffusion.nii.gz -o /data/docker_test --raw_diffusion_input --single_orientation - - name: Test csd peaks - run: pytest -v tests/test_end_to_end.py::test_end_to_end::test_csd_peaks - - name: Test tractseg docker - run: pytest -v tests/test_end_to_end.py::test_end_to_end::test_tractseg_output_docker + # - name: Build Docker image + # run: docker build -t wasserth/tractseg_container:master -f Dockerfile_CPU . + # - name: Check build dir + # run: echo $(pwd) + # - name: Run Docker image + # run: docker run -v $(pwd)/examples:/data wasserth/tractseg_container:master TractSeg \-i /data/Diffusion.nii.gz -o /data/docker_test --raw_diffusion_input --single_orientation + # - name: Test csd peaks + # run: pytest -v tests/test_end_to_end.py::test_end_to_end::test_csd_peaks + # - name: Test tractseg docker + # run: pytest -v tests/test_end_to_end.py::test_end_to_end::test_tractseg_output_docker # upload-dockerhub: # runs-on: ubuntu-latest