You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Thank you for psimi-maker-flattener,it is a very nice project
when i run xmlflattener for cancer PPI data from intAct with format psi2.5.
data comes from https://www.ebi.ac.uk/intact/download/datasets,
run sh bin/xmlflattener -mapping data/flattener-mapping-psi25.xml -xmlDocument /data/wenyuhao/code/PPI/psidev/psi/mi/tools/intAct/Cancer30/10068665.xml -o 10068665.mitab30,
The result of the operation is the following files
but it is not standard mitab2.7 format,it is missing the "Host organism(s)" eg. columns,and interactor need spoke.
Looking forward to your reply thank you~~~
The text was updated successfully, but these errors were encountered:
Thank you for psimi-maker-flattener,it is a very nice project
when i run xmlflattener for cancer PPI data from intAct with format psi2.5.
data comes from
https://www.ebi.ac.uk/intact/download/datasets
,run
sh bin/xmlflattener -mapping data/flattener-mapping-psi25.xml -xmlDocument /data/wenyuhao/code/PPI/psidev/psi/mi/tools/intAct/Cancer30/10068665.xml -o 10068665.mitab30
,The result of the operation is the following files
but it is not standard mitab2.7 format,it is missing the "Host organism(s)" eg. columns,and interactor need spoke.
Looking forward to your reply thank you~~~
The text was updated successfully, but these errors were encountered: