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Implements downloading the cavity and downstream models from RaSPs re…
Tests on poli (dev, conda, python 3.9) #192: Commit 85f2639 pushed by miguelgondu
October 27, 2023 14:14 4m 43s feature-add-rasp
October 27, 2023 14:14 4m 43s
Adds an example of how to compute saturation mutagenesis using RaSP
Tests on poli (dev, conda, python 3.9) #191: Commit 5c25427 pushed by miguelgondu
October 26, 2023 12:22 4m 8s feature-add-rasp
October 26, 2023 12:22 4m 8s
Uncomments foldx example and lints
Tests on poli (dev, conda, python 3.9) #190: Commit b3e8694 pushed by miguelgondu
October 25, 2023 15:52 4m 47s feature-add-rasp
October 25, 2023 15:52 4m 47s
Implements RaSP for more than one wildtype
Tests on poli (dev, conda, python 3.9) #189: Commit 9473941 pushed by miguelgondu
October 25, 2023 15:48 38s feature-add-rasp
October 25, 2023 15:48 38s
Adds better error handling and exceptions when running commands on th…
Tests on poli (dev, conda, python 3.9) #188: Commit 2becc26 pushed by miguelgondu
October 25, 2023 10:10 4m 14s feature-add-rasp
October 25, 2023 10:10 4m 14s
Refactors the interface and model loading to have more representative…
Tests on poli (dev, conda, python 3.9) #187: Commit 9d510e4 pushed by miguelgondu
October 25, 2023 09:40 4m 1s feature-add-rasp
October 25, 2023 09:40 4m 1s
Cleans up the warnings thrown by RaSP inference
Tests on poli (dev, conda, python 3.9) #186: Commit ffa60bb pushed by miguelgondu
October 25, 2023 09:08 4m 13s feature-add-rasp
October 25, 2023 09:08 4m 13s
Makes sure that the position in the variant is accurate by relying on…
Tests on poli (dev, conda, python 3.9) #185: Commit dea47d5 pushed by miguelgondu
October 24, 2023 14:21 4m 34s feature-add-rasp
October 24, 2023 14:21 4m 34s
Implements the problem factory for RaSP
Tests on poli (dev, conda, python 3.9) #184: Commit 30ff002 pushed by miguelgondu
October 24, 2023 13:54 3m 35s feature-add-rasp
October 24, 2023 13:54 3m 35s
Forgot linting of one file
Tests on poli (dev, conda, python 3.9) #183: Commit f3bebb7 pushed by miguelgondu
October 24, 2023 11:26 4m 16s feature-add-rasp
October 24, 2023 11:26 4m 16s
Runs linting
Tests on poli (dev, conda, python 3.9) #182: Commit b9fa69b pushed by miguelgondu
October 24, 2023 11:26 34s feature-add-rasp
October 24, 2023 11:26 34s
Implements a black box function for RaSP
Tests on poli (dev, conda, python 3.9) #181: Commit 437f6cd pushed by miguelgondu
October 24, 2023 11:20 46s feature-add-rasp
October 24, 2023 11:20 46s
Refactors the rasp interface
Tests on poli (dev, conda, python 3.9) #180: Commit 56d47b8 pushed by miguelgondu
October 19, 2023 11:45 4m 10s feature-add-rasp
October 19, 2023 11:45 4m 10s
Performs predictions using RaSP
Tests on poli (dev, conda, python 3.9) #179: Commit e641722 pushed by miguelgondu
October 17, 2023 13:22 3m 58s feature-add-rasp
October 17, 2023 13:22 3m 58s
Lints the external code
Tests on poli (dev, conda, python 3.9) #178: Commit 219eb09 pushed by miguelgondu
October 17, 2023 11:54 3m 35s feature-add-rasp
October 17, 2023 11:54 3m 35s
Brings the old implementation of rasp, which doesn't need to compute …
Tests on poli (dev, conda, python 3.9) #177: Commit 622046d pushed by miguelgondu
October 17, 2023 11:52 36s feature-add-rasp
October 17, 2023 11:52 36s
Scaffolds the data clean-up process of RaSP
Tests on poli (dev, conda, python 3.9) #176: Commit e3c0ada pushed by miguelgondu
October 16, 2023 13:49 4m 44s feature-add-rasp
October 16, 2023 13:49 4m 44s
Lints the rasp files
Tests on poli (dev, conda, python 3.9) #175: Commit e480df0 pushed by miguelgondu
October 11, 2023 11:36 3m 31s feature-add-rasp
October 11, 2023 11:36 3m 31s
Brings RaSP's code
Tests on poli (dev, conda, python 3.9) #174: Commit fe6a2ba pushed by miguelgondu
October 11, 2023 11:30 37s feature-add-rasp
October 11, 2023 11:30 37s
Scaffold RASP by bringing some of the code from their repository
Tests on poli (dev, conda, python 3.9) #173: Commit 5efe6be pushed by miguelgondu
October 10, 2023 13:10 4m 30s feature-add-rasp
October 10, 2023 13:10 4m 30s
Merge pull request #75 from MachineLearningLifeScience/updating-readm…
Tests on poli (dev, conda, python 3.9) #172: Commit 7644d6f pushed by miguelgondu
October 10, 2023 11:20 3m 55s dev
dev
October 10, 2023 11:20 3m 55s
Adss missing links to readme
Tests on poli (dev, conda, python 3.9) #170: Commit 3badebf pushed by miguelgondu
October 10, 2023 11:06 3m 34s updating-readme-and-tdc-functions
October 10, 2023 11:06 3m 34s
Remove poli__tdc tests, because they are costly to build
Tests on poli (dev, conda, python 3.9) #169: Commit 7fa8768 pushed by miguelgondu
October 10, 2023 10:58 3m 40s updating-readme-and-tdc-functions
October 10, 2023 10:58 3m 40s
Make sa_tdc a module
Tests on poli (dev, conda, python 3.9) #168: Commit b0f52d9 pushed by miguelgondu
October 10, 2023 09:54 8m 45s updating-readme-and-tdc-functions
October 10, 2023 09:54 8m 45s
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