python-tox-testing-protein-env.yml

name: poli protein (conda, py3.10)

on:
  push:
    branches:
      - dev
      - master
  pull_request:
    types: [opened, synchronize, reopened, ready_for_review, closed]
    branches:
      - dev
      - master
  schedule:
    - cron: '0 0 * * 0'

jobs:
  build-linux:
    runs-on: ubuntu-latest
    timeout-minutes: 8
    if: github.event.pull_request.draft == false
    strategy:
      max-parallel: 5

    steps:
    - uses: actions/checkout@v3
    - name: Set up Python 3.9
      uses: actions/setup-python@v3
      with:
        python-version: '3.10'
    - name: Add conda to system path
      run: |
        # $CONDA is an environment variable pointing to the root of the miniconda directory
        echo $CONDA/bin >> $GITHUB_PATH
    - name: Install dependencies
      run: |
        python -m pip install tox
    - name: Test protein-related black boxes with tox and pytest
      run: |
        tox -c tox.ini -e poli-protein-py310