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index.js
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const express = require('express');
const cors = require('cors');
const fs = require('fs');
const csv = require('csv-parser');
const csvToJson = require('csvtojson');
const fetch = require('node-fetch');
const x =[];
const app = express();
app.use(cors());
app.use(express.json());
var server = app.listen(process.env.PORT || 3000,listen);
function listen() {
var host = server.address().address;
var port = server.address().port;
// console.log('Example app listening at http://' + host + ':' + port);
}
// var path = require('path');
// console.log(path);
// app.use(express.static(path.join('public')));
// console.log(path.join('public'));
// app.use("/scripts", express.static(__dirname + '/scripts'));
// app.use(express.static('public'));
app.get('/', async (req, res) => {
// console.log("inside /");
const data = await loadCSV();
const delhi = await split_data(data.delhi);
const mumbai = await split_data(data.mumbai);
const bengaluru=await split_data(data.bengaluru);
var N_mum = 1.24e7;
var I0_mum = 1/N_mum;
var A0_mum = 1/N_mum;
var S0_mum = 1-(A0_mum+I0_mum);
var N_ben = 1.23e7;
var I0_ben = 1/N_ben;
var A0_ben = 1/N_ben;
var S0_ben = 1-(A0_ben+I0_ben);
const delhi_parameters = {Beta0:0.26,Beta1:0.14,Beta2:0.09,Gamma1:0.039,Gamma2:0.1,Delta:0.01,Gamma_D:0.004,phi:1.0,N:1.8e7,I0:parseFloat(1/(1.8e7)),A0:1/(1.8e7),S0:(1-(1/1.8e7+1/8e7)),R0:0.0};
// console.log(delhi_parameters);
const mumbai_parameters = {Beta0:0.3,Beta1:0.12,Beta2:0.09,Gamma1:0.029,Gamma2:0.07,Delta:0.0035,Gamma_D:0.003,phi:1.0,N:N_mum,I0:I0_mum,A0:A0_mum,S0:S0_mum,R0:0.0};
const bengaluru_parameters = {Beta0:0.05,Beta1:0.18,Beta2:0.05,Gamma1:0.034,Gamma2:0.034,Delta:0.0006,Gamma_D:0.002,phi:1.0,N:N_ben,I0:I0_ben,A0:A0_ben,S0:S0_ben,R0:0.0};
console.log(mumbai_parameters);
delData = await numericalCalc(delhi_parameters);
mumData = await numericalCalc(mumbai_parameters);
benData = await numericalCalc(bengaluru_parameters);
res.json({
'delData':delData,
'mumData':mumData,
'benData':benData,
'delhi':delhi,
'mumbai':mumbai,
'bengaluru':bengaluru,
});
});
app.post('/delhi',async (req,res) => {
delData = await numericalCalc(req.body);
res.json({
// message:'recieved data',
'delData':delData,
});
});
app.post('/mumbai',async (req,res) => {
console.log(req.body);
mumData = await numericalCalc(req.body);
res.json({
'mumData':mumData,
});
});
app.post('/bengaluru',async (req,res) => {
benData = await numericalCalc(req.body);
res.json({
'benData':benData,
});
});
async function loadCSV(){
const delhi = [];
const mumbai = [];
const bengaluru =[];
const csv = require('csvtojson');
// const api_url = 'https://api.covid19india.org/csv/latest/districts.csv';
const csvFilePath = 'districts.csv';
const array = await csv().fromFile(csvFilePath);
array.forEach((element) => {
if(element.District == 'Delhi')
delhi.push(element);
if(element.District == 'Mumbai')
mumbai.push(element);
if(element.District == 'Bengaluru Urban')
bengaluru.push(element);
});
return({'delhi':delhi,'mumbai':mumbai,'bengaluru':bengaluru});
}
async function split_data(data){
const Idot=[];
const Ddot=[];
const Rdot=[];
const Adot=[];
const date = await parse_date(data);
const Ic=[{x:date[0],y:parseInt(data[0].Confirmed)}];
const Dc=[{x:date[0],y:parseInt(data[0].Deceased)}];
const Rc=[{x:date[0],y:parseInt(data[0].Recovered)}];
const Ac=[{x:date[0],y:Ic[0].y-Dc[0].y-Rc[0].y}];
for(let i=1 ; i<data.length ; i++){
const row = data[i];
Ic.push({x:date[i],y:parseInt(row.Confirmed)});
Dc.push({x:date[i],y:parseInt(row.Deceased)});
Rc.push({x:date[i],y:parseInt(row.Recovered)});
Ac.push({x:date[i],y:Ic[i].y-Dc[i].y-Rc[i].y});
Idot.push({x:date[i],y:Ic[i].y-Ic[i-1].y});
Ddot.push({x:date[i],y:Dc[i].y-Dc[i-1].y});
Rdot.push({x:date[i],y:Rc[i].y-Rc[i-1].y});
Adot.push({x:date[i],y:parseInt(Ic[i].y-Ic[i-1].y-(Rc[i].y-Rc[i-1].y)-(Dc[i].y-Dc[i-1].y))});
}
return({'Idot':Idot,'Ddot':Ddot,'Adot':Adot,'Ic':Ic,'Dc':Dc,'Ac':Ac,'Rc':Rc});
}
async function parse_date(date_string){
const date=[];
for(let i=0;i<date_string.length;i++){
var p = date_string[i].Date.split("-");
date.push(new Date(p[0],p[1]-1,p[2]));
}
return date;
}
async function numericalCalc(parameters){
const t0 = 0, dt = 0.01, t = 400, t1 = 43, t2 = 117;
const N = parseFloat(parameters.N)
const I0 = parseFloat(parameters.I0) // 1 in a million infection
const A0 = parseFloat(parameters.A0)
const S0 = parseFloat(parameters.S0)
const R0 = parseFloat(parameters.R0);
// console.log(parameters);
const beta0 = parseFloat(parameters.Beta0);
const beta1 = parseFloat(parameters.Beta1);
const beta2 = parseFloat(parameters.Beta2);
const gamma1 = parseFloat(parameters.Gamma1);
const gamma2 = parseFloat(parameters.Gamma2);
const delta = parseFloat(parameters.Delta);
const gamma_D= parseFloat(parameters.Gamma_D);
const phi = parseFloat(parameters.phi);
const delData = await eulerDelhi (t0, t1, t2, S0, A0, I0, R0, dt, t, beta0, beta1, beta2, gamma1, gamma2, gamma_D, delta, N, phi);
return delData;
}
async function eulerDelhi(t0,t1,t2,S0,A0,I0,R0,dt,t,beta0,beta1,beta2,gamma1,gamma2,gamma_D,delta,N,phi)
{
var S = S0;
var I = I0;
var A = A0;
var R = R0;
var D = 0 ;
var Ic=I0;
var AplusI_c = A0+I0;
const NS=[], NA=[], NI=[],NR=[],IcN=[],DN=[],deltaAN=[],gamma_DIN=[],AplusI_cN=[],index=[],AplusIN=[];
for(let i= 0; i< (t/dt) ; i++)
{
var time = i*dt;
//PRE Lock -----------------------------------------
if(time<=t1){
S = S + dt*( -beta0*S*(A+I) ) ;
A = A + dt*( beta0*S*(A+I) - delta*A - gamma1*phi*A );
I = I + dt*( delta*A - gamma1*I );
R = R + dt*( gamma1*( phi*A + I));
D = D + dt*( gamma_D*I);
Ic= Ic+ dt*( delta*A) ;
AplusI_c = AplusI_c + dt*(beta0*S*(A+I)) ;
}
//-------------------------------------------------------
if(time>t1 && time<=t2){
S = S + dt*( -beta1*S*(A+I) ) ;
A = A + dt*( beta1*S*(A+I) - delta*A - gamma2*phi*A );
I = I + dt*( delta*A - gamma2*I );
R = R + dt*( gamma2*( phi*A + I));
D = D + dt*( gamma_D*I);
Ic= Ic+ dt*( delta*A) ;
AplusI_c = AplusI_c + dt*(beta1*S*(A+I)) ;
}
if(time>t2){
S = S + dt*( -beta2*S*(A+I) ) ;
A = A + dt*( beta2*S*(A+I) - delta*A - gamma2*phi*A );
I = I + dt*( delta*A - gamma2*I );
R = R + dt*( gamma2*( phi*A + I));
D = D + dt*( gamma_D*I);
Ic= Ic+ dt*( delta*A) ;
AplusI_c = AplusI_c + dt*(beta2*S*(A+I)) ;
}
else{}
if(i%100==0){
var date = new Date(2020,1,20);
date.setDate(date.getDate()+time);
// console.log(date);
NS.push({x:date,y:N*S});
NA.push({x:date,y:N*A});
NI.push({x:date,y:N*I});
NR.push({x:date,y:N*R});
IcN.push({x:date,y:Ic*N});
DN.push({x:date,y:D*N});
deltaAN.push({x:date,y:delta*A*N});
gamma_DIN.push({x:date,y:gamma_D*I*N});
AplusI_cN.push({x:date,y:AplusI_c*N});
// index.push(time);
AplusIN.push({x:date,y:N*A+N*I});
}
}
const delData = {'S':NS,'A':NA,'I':NI,'R':NR,'Ic':IcN,'D':DN,'deltaA':deltaAN,'gammaDI':gamma_DIN,'AplusI_c':AplusI_cN,'AplusI':AplusIN};
// console.log(delData);
return delData;
}