diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
index f085544..7724884 100644
--- a/.github/workflows/ci.yml
+++ b/.github/workflows/ci.yml
@@ -42,6 +42,6 @@ jobs:
 
         - name: Run pipeline
           run: |
-            cp -r ${GITHUB_WORKSPACE}/example . && \
             cd example/${{ matrix.PROFILE }} && \
-            nextflow run ${GITHUB_WORKSPACE} -profile docker,${{ matrix.PROFILE }}
\ No newline at end of file
+            touch test.txt && \
+            ./run.sh
\ No newline at end of file