From 53da8308a48237d399aad2dd561fde05867369c0 Mon Sep 17 00:00:00 2001 From: Nico Trummer Date: Sun, 28 Jan 2024 14:48:25 +0100 Subject: [PATCH] Make obs names unique --- bin/merge_datasets.py | 1 + 1 file changed, 1 insertion(+) diff --git a/bin/merge_datasets.py b/bin/merge_datasets.py index 2a10f1a..7c59ae7 100755 --- a/bin/merge_datasets.py +++ b/bin/merge_datasets.py @@ -45,6 +45,7 @@ # Make sure that there are no underscores in the cell names adata.obs_names = adata.obs_names.str.replace("_", "-") +adata.obs_names_make_unique() # Convert to CSR matrix adata.X = csr_matrix(adata.X)