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cip_test.txt
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cip_test.txt
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Organism Strain Gene Flank (upstram/downstream) Primer sequence Staphylococcus aureus GyrA 100 GGCGGATCCCATATGGCTGAATTACCTCA GGCGGAATTCGACGGCTCTCTTTCATTAC "Ser84, Glu88, Ser85"Staphylococcus aureus GyrA 100 AATGAACAAGGTATGACACC TACGCGCTTCAGTATAACGC "Ser84, Glu88, Ser85"Staphylococcus aureus GyrA 100 AAGGAGGAAGAATTCATGGCTGAA AGACTGACGGCTCTCTTTCATTAC "Ser84, Glu88, Ser85"Staphylococcus aureus GyrA 100 TGCGATGAGTGTTATCGTTG AGTCATACGCGCTTCAGTAT "Ser84, Glu88, Ser85"Staphylococcus aureus GyrA 100 TCGTGCATTGCCAGATGTTCG TCGAGCAGGTAAGACTGACGG "Ser84, Glu88, Ser85"Staphylococcus aureus GyrB 100 CAGCGTTAGATGTAGCAAGC CCGATTCCTGTACCAAATGC "Asp437, Arg458"Staphylococcus aureus GyrB 100 AAGTCGCACGTACAGTGGTT CTGTACCAAATGCTGTGATC "Asp437, Arg458"Staphylococcus aureus GyrB 100 GTACAGTGGTTGAAAAAGGT CCAAATGCTGTGATCATTTG "Asp437, Arg458"Staphylococcus aureus GrlB 100 CGATTAAAGCACAACAAGCAAG CATCAGTCATAATAATTACTC "Glu422, Asp432"Staphylococcus aureus GrlB 100 CGTAAAGACACTTTGCTATC TAAAGTCAGTACCAACGCCT "Glu422, Asp433"Staphylococcus aureus fusA CTCGTAATATCGGTATCATGGCTC CAGCATAGTGATCGAAGTACATAG "P404, P406, L461, P478"Staphylococcus aureus fusA GAAGACCCAACATTCCATGCAC TGGAATGTATTCACGAGGAACTAC "P404, P406, L461, P478"Staphylococcus aureus GrlA GGCCGGATCCCATATGAGTGAAATAATTCAAGATT GGCCGAATTCTAATAATTAACTGTTTACGTGCC "Ser80, Glu84"Staphylococcus aureus GrlA ACTTGAAGATGTTTTAGGTGAT TTAGGAAATCTTGATGGCAA "Ser80, Glu84"Staphylococcus aureus NorA 500 TTCACCAAGCCATCAAAAAG CTTGCCTTTCTCCAGCAATA "87, 93, 183, 186, 277, 297"Staphylococcus aureus NorA 500 TCGTCTTAGCGTTCGGTTTA TCCAGTAACCATCGGCAATA "87, 93, 183, 186, 277, 297"Staphylococcus aureus NorA 500 TGTTAAGTCTTGGTCATCTGCA AGCAGCAACAAGTAACCCTAAA "87, 93, 183, 186, 277, 297"Staphylococcus aureus NorA 500 CGCGGATCCCATCACATGCACCAATGCCG CGCGGATCCCTGTTTATTCATATGCTCAC "87, 93, 183, 186, 277, 297"Staphylococcus aureus NorA 500 TTCACCAAGCCATCAAAAAG GCACATCAAATAACGCACCT "87, 93, 183, 186, 277, 297"Staphylococcus aureus NorA 500 ATATTCAGTTGTTGTCTTAATAT GCACATCAAATAACGCACCT "87, 93, 183, 186, 277, 297"Staphylococcus aureus NorA 500 ATATTCAGTTATTGTATTAGTGC GCACATCAAATAACGCACCT "87, 93, 183, 186, 277, 297"Staphylococcus aureus GyrA 0 CATTGCCAGATGTTCGTGAC GCGCTTCAGTATAACGCATTG "Ser84, Glu88, Ser85"Staphylococcus aureus GyrA 0 CATTGCCAGATGTTCGTGAC GCTTCAGTATAACGCATTGCTG "Ser84, Glu88, Ser85"Staphylococcus aureus GyrA 0 CCAGATGTTCGTGACGGTTT GCGCTTCAGTATAACGCATTG "Ser84, Glu88, Ser85"Staphylococcus aureus GyrA 0 CCAGATGTTCGTGACGGTTT GCTTCAGTATAACGCATTGCTG "Ser84, Glu88, Ser85"Staphylococcus aureus GyrA 0 CATTGCCAGATGTTCGTGAC TCATACGCGCTTCAGTATAACG "Ser84, Glu88, Ser85"Staphylococcus aureus GyrB 0 CGTCGTAAATCAGCGTTAGATG CCGATTCCTGTACCAAATGC "Asp437, Arg458"Staphylococcus aureus GyrB 0 GCGCGTGAAGTAACACGTC CCGATTCCTGTACCAAATGC "Asp437, Arg458"Staphylococcus aureus GyrB 0 AGCGCGTGAAGTAACACGTC CCGATTCCTGTACCAAATGC "Asp437, Arg458"Staphylococcus aureus GyrB 0 AAAAAGCGCGTGAAGTAACA CCGATTCCTGTACCAAATGC "Asp437, Arg458"Staphylococcus aureus GyrB 0 CACGTCGTAAATCAGCGTTAGA CCGATTCCTGTACCAAATGC "Asp437, Arg458"Staphylococcus aureus GrlB 0 ACAACAAGCAAGGGAAGCTG TTCCAGACGTGCTTTCTCTG "Glu422, Asp432"Staphylococcus aureus GrlB 0 AGCACAACAAGCAAGGGAAG TTCCAGACGTGCTTTCTCTG "Glu422, Asp432"Staphylococcus aureus GrlB 0 CAAGGGAAGCTGCACGTAA TTCCAGACGTGCTTTCTCTG "Glu422, Asp432"Staphylococcus aureus GrlB 0 AGCACAACAAGCAAGGGAAG TTCCAGACGTGCTTTCTCTGT "Glu422, Asp432"Staphylococcus aureus GrlB 0 CAAGGGAAGCTGCACGTAA TTCCAGACGTGCTTTCTCTGT "Glu422, Asp432"Staphylococcus aureus GrlA 0 ATTGCCAGATGTTCGTGATG AGCTTCAGTGTAACGCATTG "Ser80, Glu84"Staphylococcus aureus GrlA 0 CATTGCCAGATGTTCGTGAT AGCTTCAGTGTAACGCATTG "Ser80, Glu84"Staphylococcus aureus GrlA 0 GCCAGATGTTCGTGATGGTT AGCTTCAGTGTAACGCATTG "Ser80, Glu84"Staphylococcus aureus GrlA 0 AACCCGTACAACGTCGTATTTT AGCTTCAGTGTAACGCATTG "Ser80, Glu84"Staphylococcus aureus GrlA 0 ATTGCCAGATGTTCGTGATG TTAGCTTCAGTGTAACGCATTG "Ser80, Glu84"Staphylococcus aureus FusA 0 CGGCTGCGGTAGGTCTTA ATGAAACCATTGGAGCACCT "P404, P406, L461, P478"Staphylococcus aureus FusA 0 CGGCTGCGGTAGGTCTTA CCATTGGAGCACCTACGTTA "P404, P406, L461, P478"Staphylococcus aureus FusA 0 CGGCTGCGGTAGGTCTTA CCATTGGAGCACCTACGTTAC "P404, P406, L461, P478"Staphylococcus aureus FusA 0 CGGCTGCGGTAGGTCTTA ACCATTGGAGCACCTACGTTA "P404, P406, L461, P478"Staphylococcus aureus FusA 0 GGTGAGAAAAATGACATTATCTTGG ATGAAACCATTGGAGCACCT "P404, P406, L461, P478"Staphylococcus aureus NorA 0 TTTAGGACCAGGGATTGGTG CACCCGTAATAGCAATCGAAA "87, 93, 183, 186, 277, 297"Staphylococcus aureus NorA 0 TTGGTGGATTTATGGCAGAAG CACCCGTAATAGCAATCGAAA "87, 93, 183, 186, 277, 297"Staphylococcus aureus NorA 0 TTTAGGACCAGGGATTGGTG CAAATATACCGCCACCCGTA "87, 93, 183, 186, 277, 297"Staphylococcus aureus NorA 0 TTGGTGGATTTATGGCAGAAG CAAATATACCGCCACCCGTA "87, 93, 183, 186, 277, 297"Staphylococcus aureus NorA 0 TTTAGGACCAGGGATTGGTG AAATATACCGCCACCCGTAA "87, 93, 183, 186, 277, 297"Staphylococcus aureus NorA 0 GTTGCTGCTTTTGCGTTATC TCGCTGACATGTAGCCAAAG "87, 93"Staphylococcus aureus NorA 0 AGTTGCTGCTTTTGCGTTATC TCGCTGACATGTAGCCAAAG "87, 93"Staphylococcus aureus NorA 0 TGCTGCTTTTGCGTTATCTC CGCTGACATGTAGCCAAAGTT "87, 93"Staphylococcus aureus NorA 0 TTGCTGCTTTTGCGTTATCT CGCTGACATGTAGCCAAAGT "87, 93"Staphylococcus aureus NorA 0 GTTGCTGCTTTTGCGTTATC CGCTGACATGTAGCCAAAGT "87, 93"Staphylococcus aureus NorA 0 TTTAGGACCAGGGATTGGTG CACCCGTAATAGCAATCGAAA "183, 186"Staphylococcus aureus NorA 0 TTTAGGACCAGGGATTGGTG CAAATATACCGCCACCCGTA "183, 186"Staphylococcus aureus NorA 0 TTTAGGACCAGGGATTGGTG AAATATACCGCCACCCGTAA "183, 186"Staphylococcus aureus NorA 0 TTTAGGACCAGGGATTGGTG CACCCGTAATAGCAATCGAA "183, 186"Staphylococcus aureus NorA 0 ACCAGGGATTGGTGGATTTA CACCCGTAATAGCAATCGAAA "183, 186"Staphylococcus aureus NorA 0 TACGGGTGGCGGTATATTTG AAAGCCTTGCCTTTCTCCAG "277, 297"Staphylococcus aureus NorA 0 CGGTATATTTGGGGCACTTTT AAAGCCTTGCCTTTCTCCAG "277, 297"Staphylococcus aureus NorA 0 GCGGTATATTTGGGGCACTT AAAGCCTTGCCTTTCTCCAG "277, 297"Staphylococcus aureus NorA 0 CGGTATATTTGGGGCACTTT AAAGCCTTGCCTTTCTCCAG "277, 297"Staphylococcus aureus NorA 0 TACGGGTGGCGGTATATTTG AAAGCCTTGCCTTTCTCCA "277, 297"