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DESCRIPTION
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DESCRIPTION
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Package: PhenotypeR
Type: Package
Title: Assess Study Cohorts Using a Common Data Model
Version: 0.0.900
Authors@R: c(
person("Edward", "Burn", , "[email protected]",
role = c("aut", "cre"), comment = c(ORCID = "0000-0002-9286-1128")),
person("Marti", "Catala", , "[email protected]",
role = c("aut"), comment = c(ORCID = "0000-0003-3308-9905")),
person("Xihang", "Chen", , "[email protected]",
role = c("aut"), comment = c(ORCID = "0009-0001-8112-8959")),
person("Marta", "Alcalde-Herraiz", , "[email protected]",
role = c("aut"), comment = c(ORCID = "0009-0002-4405-1814")),
person("Albert", "Prats-Uribe", , "[email protected]",
role = "aut", comment = c(ORCID = "0000-0003-1202-9153")))
Description: Phenotype study cohorts in data mapped to the
Observational Medical Outcomes Partnership Common Data Model. Diagnostics
are run at the database, codelist, cohort, and population level to assess
whether study cohorts are ready for research.
License: Apache License (>= 2)
Encoding: UTF-8
LazyData: true
Suggests:
CDMConnector,
duckdb,
DBI,
gt,
omock,
testthat (>= 3.0.0),
knitr,
visOmopResults,
glue,
RPostgres,
PatientProfiles,
ggplot2,
ggpubr,
stringr,
shiny,
DiagrammeR,
sortable,
shinycssloaders,
here,
DT,
bslib,
shinyWidgets,
plotly,
tidyr
Config/testthat/edition: 3
RoxygenNote: 7.3.2
Imports:
CodelistGenerator (>= 3.1.0),
CohortCharacteristics,
CohortConstructor,
cli,
dplyr,
IncidencePrevalence (>= 0.8.0),
omopgenerics,
OmopSketch,
magrittr,
purrr,
rlang,
vctrs,
usethis
URL: https://ohdsi.github.io/PhenotypeR/
VignetteBuilder: knitr