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i.atcorr: Fix uninitialized variable #3311

i.atcorr: Fix uninitialized variable

i.atcorr: Fix uninitialized variable #3311

---
name: Python Code Quality
on:
push:
branches:
- main
- releasebranch_*
pull_request:
jobs:
python-checks:
name: Python Code Quality Checks
concurrency:
group: ${{ github.workflow }}-${{ github.job }}-${{
github.event_name == 'pull_request' &&
github.head_ref || github.sha }}
cancel-in-progress: true
strategy:
matrix:
include:
- os: ubuntu-22.04
env:
# renovate: datasource=python-version depName=python
PYTHON_VERSION: "3.10"
MIN_PYTHON_VERSION: "3.8"
# renovate: datasource=pypi depName=black
BLACK_VERSION: "24.4.2"
# renovate: datasource=pypi depName=flake8
FLAKE8_VERSION: "7.1.0"
# renovate: datasource=pypi depName=pylint
PYLINT_VERSION: "2.12.2"
# renovate: datasource=pypi depName=bandit
BANDIT_VERSION: "1.7.9"
# renovate: datasource=pypi depName=ruff
RUFF_VERSION: "0.5.1"
runs-on: ${{ matrix.os }}
permissions:
security-events: write
steps:
- name: Versions
run: |
echo OS: ${{ matrix.os }}
echo Python: ${{ env.PYTHON_VERSION }}
echo Minimal Python version: ${{ env.MIN_PYTHON_VERSION }}
echo Black: ${{ env.BLACK_VERSION }}
echo Flake8: ${{ env.FLAKE8_VERSION }}
echo Pylint: ${{ env.PYLINT_VERSION }}
echo Bandit: ${{ env.BANDIT_VERSION }}
echo Ruff: ${{ env.RUFF_VERSION }}
- uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
- name: Set up Python
uses: actions/setup-python@39cd14951b08e74b54015e9e001cdefcf80e669f # v5.1.1
with:
python-version: ${{ env.PYTHON_VERSION }}
cache: pip
- name: Upgrade pip
run: python -m pip install --upgrade pip
- name: Install Ruff
run: pip install ruff==${{ env.RUFF_VERSION }}
- name: Run Ruff
run: ruff check --output-format=github . --preview --fix --unsafe-fixes
- name: Create and uploads code suggestions to apply for Ruff
# Will fail fast here if there are changes required
id: diff-ruff
# To run after ruff step exits with failure when rules don't have fixes available
if: ${{ !cancelled() }}
uses: ./.github/actions/create-upload-suggestions
with:
tool-name: ruff
# To keep repo's file structure in formatted changes artifact
extra-upload-changes: pyproject.toml
- name: Install Black only
run: pip install black[jupyter]==${{ env.BLACK_VERSION }}
- name: Run Black
run: black .
- name: Create and uploads code suggestions to apply for Black
# Will fail fast here if there are changes required
id: diff-black
uses: ./.github/actions/create-upload-suggestions
with:
tool-name: black
# To keep repo's file structure in formatted changes artifact
extra-upload-changes: .clang-format
- name: Install non-Python dependencies
run: |
sudo apt-get update -y
sudo apt-get install -y wget git gawk findutils
xargs -a <(awk '! /^ *(#|$)/' ".github/workflows/apt.txt") -r -- \
sudo apt-get install -y --no-install-recommends --no-install-suggests
- name: Install Python dependencies
run: |
pip install -r .github/workflows/python_requirements.txt
pip install -r .github/workflows/optional_requirements.txt
pip install --user pipx
pipx ensurepath
pipx install flake8==${{ env.FLAKE8_VERSION }}
pipx install pylint==${{ env.PYLINT_VERSION }}
pipx inject pylint -r .github/workflows/python_requirements.txt -r .github/workflows/optional_requirements.txt
# The extra toml is only needed before Python 3.11
pipx install bandit[sarif,toml]==${{ env.BANDIT_VERSION }}
- name: Run Flake8
run: |
flake8 --count --statistics --show-source --jobs=$(nproc) .
- name: Run Flake8 on additional files
run: |
flake8 --count --statistics --show-source --jobs=$(nproc) python/grass/{script,jupyter}/testsuite/
- name: Bandit Vulnerability Scan
run: |
bandit -c pyproject.toml -iii -r . -f sarif -o bandit.sarif --exit-zero
- name: Upload Bandit Scan Results
uses: actions/upload-artifact@0b2256b8c012f0828dc542b3febcab082c67f72b # v4.3.4
with:
name: bandit.sarif
path: bandit.sarif
- name: Upload SARIF File into Security Tab
uses: github/codeql-action/upload-sarif@b611370bb5703a7efb587f9d136a52ea24c5c38c # v3.25.11
with:
sarif_file: bandit.sarif
- name: Create installation directory
run: |
mkdir $HOME/install
- name: Set number of cores for compilation
run: |
echo "MAKEFLAGS=-j$(nproc)" >> $GITHUB_ENV
- uses: rui314/setup-mold@2e332a0b602c2fc65d2d3995941b1b29a5f554a0 # v1
- name: Build
run: .github/workflows/build_${{ matrix.os }}.sh $HOME/install
- name: Add the bin directory to PATH
run: |
echo "$HOME/install/bin" >> $GITHUB_PATH
- name: Run Pylint on grass package
run: |
export PYTHONPATH=`grass --config python_path`:$PYTHONPATH
export LD_LIBRARY_PATH=$(grass --config path)/lib:$LD_LIBRARY_PATH
cd python
pylint --persistent=no --py-version=${{ env.MIN_PYTHON_VERSION }} --jobs=$(nproc) grass
- name: Run Pylint on wxGUI
run: |
export PYTHONPATH=`grass --config python_path`:$PYTHONPATH
export LD_LIBRARY_PATH=$(grass --config path)/lib:$LD_LIBRARY_PATH
cd gui/wxpython
pylint --persistent=no --py-version=${{ env.MIN_PYTHON_VERSION }} --jobs=$(nproc) *
- name: Run Pylint on other files using pytest
run: |
pipx inject --include-apps pylint pytest==7.4.4
pipx inject pylint pytest-pylint==0.19 pytest-github-actions-annotate-failures
echo "::warning file=.github/workflows/python-code-quality.yml,line=149,col=42,endColumn=48::\
Temporarily downgraded pytest-pylint and pytest to allow merging other PRs.\
The errors reported with a newer version seem legitimite and should be fixed \
(2023-10-18, see https://github.com/OSGeo/grass/pull/3205)\
(2024-01-28, see https://github.com/OSGeo/grass/issues/3380)"
export PYTHONPATH=`grass --config python_path`:$PYTHONPATH
export LD_LIBRARY_PATH=$(grass --config path)/lib:$LD_LIBRARY_PATH
pytest --pylint -m pylint --pylint-rcfile=.pylintrc --pylint-jobs=$(nproc) \
--pylint-ignore-patterns="${{ env.PylintIgnore }}"
env:
PylintIgnore: "python/.*,gui/wxpython/.*,doc/.*,man/.*,utils/.*,locale/.*,raster/.*,\
imagery/.*,scripts/r.in.wms/wms_drv.py,scripts/g.extension/g.extension.py,\
temporal/t.rast.accdetect/t.rast.accdetect.py,temporal/t.rast.accumulate/t.rast.accumulate.py,\
scripts/d.rast.edit/d.rast.edit.py"
- name: Test compiling example modules
run: |
( cd doc/raster/r.example/ && make )
( cd doc/vector/v.example/ && make )
- name: Run Sphinx to check API documentation build
run: |
pip install sphinx
make sphinxdoclib
ARCH=$(cat include/Make/Platform.make | grep ^ARCH | cut -d'=' -f2 | xargs)
cp -rp dist.$ARCH/docs/html/libpython sphinx-grass
- name: Make Sphinx documentation available
uses: actions/upload-artifact@0b2256b8c012f0828dc542b3febcab082c67f72b # v4.3.4
with:
name: sphinx-grass
path: sphinx-grass
retention-days: 3
python-success:
name: Python Code Quality Result
needs:
- python-checks
if: ${{ always() }}
uses: ./.github/workflows/verify-success.yml
with:
needs_context: ${{ toJson(needs) }}