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rrdengine.c
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// SPDX-License-Identifier: GPL-3.0-or-later
#define NETDATA_RRD_INTERNALS
#include "rrdengine.h"
rrdeng_stats_t global_io_errors = 0;
rrdeng_stats_t global_fs_errors = 0;
rrdeng_stats_t rrdeng_reserved_file_descriptors = 0;
rrdeng_stats_t global_pg_cache_over_half_dirty_events = 0;
rrdeng_stats_t global_flushing_pressure_page_deletions = 0;
static void sanity_check(void)
{
/* Magic numbers must fit in the super-blocks */
BUILD_BUG_ON(strlen(RRDENG_DF_MAGIC) > RRDENG_MAGIC_SZ);
BUILD_BUG_ON(strlen(RRDENG_JF_MAGIC) > RRDENG_MAGIC_SZ);
/* Version strings must fit in the super-blocks */
BUILD_BUG_ON(strlen(RRDENG_DF_VER) > RRDENG_VER_SZ);
BUILD_BUG_ON(strlen(RRDENG_JF_VER) > RRDENG_VER_SZ);
/* Data file super-block cannot be larger than RRDENG_BLOCK_SIZE */
BUILD_BUG_ON(RRDENG_DF_SB_PADDING_SZ < 0);
BUILD_BUG_ON(sizeof(uuid_t) != UUID_SZ); /* check UUID size */
/* page count must fit in 8 bits */
BUILD_BUG_ON(MAX_PAGES_PER_EXTENT > 255);
/* extent cache count must fit in 32 bits */
BUILD_BUG_ON(MAX_CACHED_EXTENTS > 32);
/* page info scratch space must be able to hold 2 32-bit integers */
BUILD_BUG_ON(sizeof(((struct rrdeng_page_info *)0)->scratch) < 2 * sizeof(uint32_t));
}
/* always inserts into tail */
static inline void xt_cache_replaceQ_insert(struct rrdengine_worker_config* wc,
struct extent_cache_element *xt_cache_elem)
{
struct extent_cache *xt_cache = &wc->xt_cache;
xt_cache_elem->prev = NULL;
xt_cache_elem->next = NULL;
if (likely(NULL != xt_cache->replaceQ_tail)) {
xt_cache_elem->prev = xt_cache->replaceQ_tail;
xt_cache->replaceQ_tail->next = xt_cache_elem;
}
if (unlikely(NULL == xt_cache->replaceQ_head)) {
xt_cache->replaceQ_head = xt_cache_elem;
}
xt_cache->replaceQ_tail = xt_cache_elem;
}
static inline void xt_cache_replaceQ_delete(struct rrdengine_worker_config* wc,
struct extent_cache_element *xt_cache_elem)
{
struct extent_cache *xt_cache = &wc->xt_cache;
struct extent_cache_element *prev, *next;
prev = xt_cache_elem->prev;
next = xt_cache_elem->next;
if (likely(NULL != prev)) {
prev->next = next;
}
if (likely(NULL != next)) {
next->prev = prev;
}
if (unlikely(xt_cache_elem == xt_cache->replaceQ_head)) {
xt_cache->replaceQ_head = next;
}
if (unlikely(xt_cache_elem == xt_cache->replaceQ_tail)) {
xt_cache->replaceQ_tail = prev;
}
xt_cache_elem->prev = xt_cache_elem->next = NULL;
}
static inline void xt_cache_replaceQ_set_hot(struct rrdengine_worker_config* wc,
struct extent_cache_element *xt_cache_elem)
{
xt_cache_replaceQ_delete(wc, xt_cache_elem);
xt_cache_replaceQ_insert(wc, xt_cache_elem);
}
/* Returns the index of the cached extent if it was successfully inserted in the extent cache, otherwise -1 */
static int try_insert_into_xt_cache(struct rrdengine_worker_config* wc, struct extent_info *extent)
{
struct extent_cache *xt_cache = &wc->xt_cache;
struct extent_cache_element *xt_cache_elem;
unsigned idx;
int ret;
ret = find_first_zero(xt_cache->allocation_bitmap);
if (-1 == ret || ret >= MAX_CACHED_EXTENTS) {
for (xt_cache_elem = xt_cache->replaceQ_head ; NULL != xt_cache_elem ; xt_cache_elem = xt_cache_elem->next) {
idx = xt_cache_elem - xt_cache->extent_array;
if (!check_bit(xt_cache->inflight_bitmap, idx)) {
xt_cache_replaceQ_delete(wc, xt_cache_elem);
break;
}
}
if (NULL == xt_cache_elem)
return -1;
} else {
idx = (unsigned)ret;
xt_cache_elem = &xt_cache->extent_array[idx];
}
xt_cache_elem->extent = extent;
xt_cache_elem->fileno = extent->datafile->fileno;
xt_cache_elem->inflight_io_descr = NULL;
xt_cache_replaceQ_insert(wc, xt_cache_elem);
modify_bit(&xt_cache->allocation_bitmap, idx, 1);
return (int)idx;
}
/**
* Returns 0 if the cached extent was found in the extent cache, 1 otherwise.
* Sets *idx to point to the position of the extent inside the cache.
**/
static uint8_t lookup_in_xt_cache(struct rrdengine_worker_config* wc, struct extent_info *extent, unsigned *idx)
{
struct extent_cache *xt_cache = &wc->xt_cache;
struct extent_cache_element *xt_cache_elem;
unsigned i;
for (i = 0 ; i < MAX_CACHED_EXTENTS ; ++i) {
xt_cache_elem = &xt_cache->extent_array[i];
if (check_bit(xt_cache->allocation_bitmap, i) && xt_cache_elem->extent == extent &&
xt_cache_elem->fileno == extent->datafile->fileno) {
*idx = i;
return 0;
}
}
return 1;
}
#if 0 /* disabled code */
static void delete_from_xt_cache(struct rrdengine_worker_config* wc, unsigned idx)
{
struct extent_cache *xt_cache = &wc->xt_cache;
struct extent_cache_element *xt_cache_elem;
xt_cache_elem = &xt_cache->extent_array[idx];
xt_cache_replaceQ_delete(wc, xt_cache_elem);
xt_cache_elem->extent = NULL;
modify_bit(&wc->xt_cache.allocation_bitmap, idx, 0); /* invalidate it */
modify_bit(&wc->xt_cache.inflight_bitmap, idx, 0); /* not in-flight anymore */
}
#endif
void enqueue_inflight_read_to_xt_cache(struct rrdengine_worker_config* wc, unsigned idx,
struct extent_io_descriptor *xt_io_descr)
{
struct extent_cache *xt_cache = &wc->xt_cache;
struct extent_cache_element *xt_cache_elem;
struct extent_io_descriptor *old_next;
xt_cache_elem = &xt_cache->extent_array[idx];
old_next = xt_cache_elem->inflight_io_descr->next;
xt_cache_elem->inflight_io_descr->next = xt_io_descr;
xt_io_descr->next = old_next;
}
void read_cached_extent_cb(struct rrdengine_worker_config* wc, unsigned idx, struct extent_io_descriptor *xt_io_descr)
{
unsigned i, j, page_offset;
struct rrdengine_instance *ctx = wc->ctx;
struct rrdeng_page_descr *descr;
struct page_cache_descr *pg_cache_descr;
void *page;
struct extent_info *extent = xt_io_descr->descr_array[0]->extent;
for (i = 0 ; i < xt_io_descr->descr_count; ++i) {
page = mallocz(RRDENG_BLOCK_SIZE);
descr = xt_io_descr->descr_array[i];
for (j = 0, page_offset = 0 ; j < extent->number_of_pages ; ++j) {
/* care, we don't hold the descriptor mutex */
if (!uuid_compare(*extent->pages[j]->id, *descr->id) &&
extent->pages[j]->page_length == descr->page_length &&
extent->pages[j]->start_time == descr->start_time &&
extent->pages[j]->end_time == descr->end_time) {
break;
}
page_offset += extent->pages[j]->page_length;
}
/* care, we don't hold the descriptor mutex */
(void) memcpy(page, wc->xt_cache.extent_array[idx].pages + page_offset, descr->page_length);
rrdeng_page_descr_mutex_lock(ctx, descr);
pg_cache_descr = descr->pg_cache_descr;
pg_cache_descr->page = page;
pg_cache_descr->flags |= RRD_PAGE_POPULATED;
pg_cache_descr->flags &= ~RRD_PAGE_READ_PENDING;
rrdeng_page_descr_mutex_unlock(ctx, descr);
pg_cache_replaceQ_insert(ctx, descr);
if (xt_io_descr->release_descr) {
pg_cache_put(ctx, descr);
} else {
debug(D_RRDENGINE, "%s: Waking up waiters.", __func__);
pg_cache_wake_up_waiters(ctx, descr);
}
}
if (xt_io_descr->completion)
complete(xt_io_descr->completion);
freez(xt_io_descr);
}
void read_extent_cb(uv_fs_t* req)
{
struct rrdengine_worker_config* wc = req->loop->data;
struct rrdengine_instance *ctx = wc->ctx;
struct extent_io_descriptor *xt_io_descr;
struct rrdeng_page_descr *descr;
struct page_cache_descr *pg_cache_descr;
int ret;
unsigned i, j, count;
void *page, *uncompressed_buf = NULL;
uint32_t payload_length, payload_offset, page_offset, uncompressed_payload_length = 0;
uint8_t have_read_error = 0;
/* persistent structures */
struct rrdeng_df_extent_header *header;
struct rrdeng_df_extent_trailer *trailer;
uLong crc;
xt_io_descr = req->data;
header = xt_io_descr->buf;
payload_length = header->payload_length;
count = header->number_of_pages;
payload_offset = sizeof(*header) + sizeof(header->descr[0]) * count;
trailer = xt_io_descr->buf + xt_io_descr->bytes - sizeof(*trailer);
if (req->result < 0) {
struct rrdengine_datafile *datafile = xt_io_descr->descr_array[0]->extent->datafile;
++ctx->stats.io_errors;
rrd_stat_atomic_add(&global_io_errors, 1);
have_read_error = 1;
error("%s: uv_fs_read - %s - extent at offset %"PRIu64"(%u) in datafile %u-%u.", __func__,
uv_strerror((int)req->result), xt_io_descr->pos, xt_io_descr->bytes, datafile->tier, datafile->fileno);
goto after_crc_check;
}
crc = crc32(0L, Z_NULL, 0);
crc = crc32(crc, xt_io_descr->buf, xt_io_descr->bytes - sizeof(*trailer));
ret = crc32cmp(trailer->checksum, crc);
#ifdef NETDATA_INTERNAL_CHECKS
{
struct rrdengine_datafile *datafile = xt_io_descr->descr_array[0]->extent->datafile;
debug(D_RRDENGINE, "%s: Extent at offset %"PRIu64"(%u) was read from datafile %u-%u. CRC32 check: %s", __func__,
xt_io_descr->pos, xt_io_descr->bytes, datafile->tier, datafile->fileno, ret ? "FAILED" : "SUCCEEDED");
}
#endif
if (unlikely(ret)) {
struct rrdengine_datafile *datafile = xt_io_descr->descr_array[0]->extent->datafile;
++ctx->stats.io_errors;
rrd_stat_atomic_add(&global_io_errors, 1);
have_read_error = 1;
error("%s: Extent at offset %"PRIu64"(%u) was read from datafile %u-%u. CRC32 check: FAILED", __func__,
xt_io_descr->pos, xt_io_descr->bytes, datafile->tier, datafile->fileno);
}
after_crc_check:
if (!have_read_error && RRD_NO_COMPRESSION != header->compression_algorithm) {
uncompressed_payload_length = 0;
for (i = 0 ; i < count ; ++i) {
uncompressed_payload_length += header->descr[i].page_length;
}
uncompressed_buf = mallocz(uncompressed_payload_length);
ret = LZ4_decompress_safe(xt_io_descr->buf + payload_offset, uncompressed_buf,
payload_length, uncompressed_payload_length);
ctx->stats.before_decompress_bytes += payload_length;
ctx->stats.after_decompress_bytes += ret;
debug(D_RRDENGINE, "LZ4 decompressed %u bytes to %d bytes.", payload_length, ret);
/* care, we don't hold the descriptor mutex */
}
{
uint8_t xt_is_cached = 0;
unsigned xt_idx;
struct extent_info *extent = xt_io_descr->descr_array[0]->extent;
xt_is_cached = !lookup_in_xt_cache(wc, extent, &xt_idx);
if (xt_is_cached && check_bit(wc->xt_cache.inflight_bitmap, xt_idx)) {
struct extent_cache *xt_cache = &wc->xt_cache;
struct extent_cache_element *xt_cache_elem = &xt_cache->extent_array[xt_idx];
struct extent_io_descriptor *curr, *next;
if (have_read_error) {
memset(xt_cache_elem->pages, 0, sizeof(xt_cache_elem->pages));
} else if (RRD_NO_COMPRESSION == header->compression_algorithm) {
(void)memcpy(xt_cache_elem->pages, xt_io_descr->buf + payload_offset, payload_length);
} else {
(void)memcpy(xt_cache_elem->pages, uncompressed_buf, uncompressed_payload_length);
}
/* complete all connected in-flight read requests */
for (curr = xt_cache_elem->inflight_io_descr->next ; curr ; curr = next) {
next = curr->next;
read_cached_extent_cb(wc, xt_idx, curr);
}
xt_cache_elem->inflight_io_descr = NULL;
modify_bit(&xt_cache->inflight_bitmap, xt_idx, 0); /* not in-flight anymore */
}
}
for (i = 0 ; i < xt_io_descr->descr_count; ++i) {
page = mallocz(RRDENG_BLOCK_SIZE);
descr = xt_io_descr->descr_array[i];
for (j = 0, page_offset = 0; j < count; ++j) {
/* care, we don't hold the descriptor mutex */
if (!uuid_compare(*(uuid_t *) header->descr[j].uuid, *descr->id) &&
header->descr[j].page_length == descr->page_length &&
header->descr[j].start_time == descr->start_time &&
header->descr[j].end_time == descr->end_time) {
break;
}
page_offset += header->descr[j].page_length;
}
/* care, we don't hold the descriptor mutex */
if (have_read_error) {
/* Applications should make sure NULL values match 0 as does SN_EMPTY_SLOT */
memset(page, 0, descr->page_length);
} else if (RRD_NO_COMPRESSION == header->compression_algorithm) {
(void) memcpy(page, xt_io_descr->buf + payload_offset + page_offset, descr->page_length);
} else {
(void) memcpy(page, uncompressed_buf + page_offset, descr->page_length);
}
rrdeng_page_descr_mutex_lock(ctx, descr);
pg_cache_descr = descr->pg_cache_descr;
pg_cache_descr->page = page;
pg_cache_descr->flags |= RRD_PAGE_POPULATED;
pg_cache_descr->flags &= ~RRD_PAGE_READ_PENDING;
rrdeng_page_descr_mutex_unlock(ctx, descr);
pg_cache_replaceQ_insert(ctx, descr);
if (xt_io_descr->release_descr) {
pg_cache_put(ctx, descr);
} else {
debug(D_RRDENGINE, "%s: Waking up waiters.", __func__);
pg_cache_wake_up_waiters(ctx, descr);
}
}
if (!have_read_error && RRD_NO_COMPRESSION != header->compression_algorithm) {
freez(uncompressed_buf);
}
if (xt_io_descr->completion)
complete(xt_io_descr->completion);
uv_fs_req_cleanup(req);
free(xt_io_descr->buf);
freez(xt_io_descr);
}
static void do_read_extent(struct rrdengine_worker_config* wc,
struct rrdeng_page_descr **descr,
unsigned count,
uint8_t release_descr)
{
struct rrdengine_instance *ctx = wc->ctx;
struct page_cache_descr *pg_cache_descr;
int ret;
unsigned i, size_bytes, pos, real_io_size;
// uint32_t payload_length;
struct extent_io_descriptor *xt_io_descr;
struct rrdengine_datafile *datafile;
struct extent_info *extent = descr[0]->extent;
uint8_t xt_is_cached = 0, xt_is_inflight = 0;
unsigned xt_idx;
datafile = extent->datafile;
pos = extent->offset;
size_bytes = extent->size;
xt_io_descr = callocz(1, sizeof(*xt_io_descr));
for (i = 0 ; i < count; ++i) {
rrdeng_page_descr_mutex_lock(ctx, descr[i]);
pg_cache_descr = descr[i]->pg_cache_descr;
pg_cache_descr->flags |= RRD_PAGE_READ_PENDING;
// payload_length = descr[i]->page_length;
rrdeng_page_descr_mutex_unlock(ctx, descr[i]);
xt_io_descr->descr_array[i] = descr[i];
}
xt_io_descr->descr_count = count;
xt_io_descr->bytes = size_bytes;
xt_io_descr->pos = pos;
xt_io_descr->req.data = xt_io_descr;
xt_io_descr->completion = NULL;
/* xt_io_descr->descr_commit_idx_array[0] */
xt_io_descr->release_descr = release_descr;
xt_is_cached = !lookup_in_xt_cache(wc, extent, &xt_idx);
if (xt_is_cached) {
xt_cache_replaceQ_set_hot(wc, &wc->xt_cache.extent_array[xt_idx]);
xt_is_inflight = check_bit(wc->xt_cache.inflight_bitmap, xt_idx);
if (xt_is_inflight) {
enqueue_inflight_read_to_xt_cache(wc, xt_idx, xt_io_descr);
return;
}
return read_cached_extent_cb(wc, xt_idx, xt_io_descr);
} else {
ret = try_insert_into_xt_cache(wc, extent);
if (-1 != ret) {
xt_idx = (unsigned)ret;
modify_bit(&wc->xt_cache.inflight_bitmap, xt_idx, 1);
wc->xt_cache.extent_array[xt_idx].inflight_io_descr = xt_io_descr;
}
}
ret = posix_memalign((void *)&xt_io_descr->buf, RRDFILE_ALIGNMENT, ALIGN_BYTES_CEILING(size_bytes));
if (unlikely(ret)) {
fatal("posix_memalign:%s", strerror(ret));
/* freez(xt_io_descr);
return;*/
}
real_io_size = ALIGN_BYTES_CEILING(size_bytes);
xt_io_descr->iov = uv_buf_init((void *)xt_io_descr->buf, real_io_size);
ret = uv_fs_read(wc->loop, &xt_io_descr->req, datafile->file, &xt_io_descr->iov, 1, pos, read_extent_cb);
fatal_assert(-1 != ret);
ctx->stats.io_read_bytes += real_io_size;
++ctx->stats.io_read_requests;
ctx->stats.io_read_extent_bytes += real_io_size;
++ctx->stats.io_read_extents;
ctx->stats.pg_cache_backfills += count;
}
static void commit_data_extent(struct rrdengine_worker_config* wc, struct extent_io_descriptor *xt_io_descr)
{
struct rrdengine_instance *ctx = wc->ctx;
unsigned count, payload_length, descr_size, size_bytes;
void *buf;
/* persistent structures */
struct rrdeng_df_extent_header *df_header;
struct rrdeng_jf_transaction_header *jf_header;
struct rrdeng_jf_store_data *jf_metric_data;
struct rrdeng_jf_transaction_trailer *jf_trailer;
uLong crc;
df_header = xt_io_descr->buf;
count = df_header->number_of_pages;
descr_size = sizeof(*jf_metric_data->descr) * count;
payload_length = sizeof(*jf_metric_data) + descr_size;
size_bytes = sizeof(*jf_header) + payload_length + sizeof(*jf_trailer);
buf = wal_get_transaction_buffer(wc, size_bytes);
jf_header = buf;
jf_header->type = STORE_DATA;
jf_header->reserved = 0;
jf_header->id = ctx->commit_log.transaction_id++;
jf_header->payload_length = payload_length;
jf_metric_data = buf + sizeof(*jf_header);
jf_metric_data->extent_offset = xt_io_descr->pos;
jf_metric_data->extent_size = xt_io_descr->bytes;
jf_metric_data->number_of_pages = count;
memcpy(jf_metric_data->descr, df_header->descr, descr_size);
jf_trailer = buf + sizeof(*jf_header) + payload_length;
crc = crc32(0L, Z_NULL, 0);
crc = crc32(crc, buf, sizeof(*jf_header) + payload_length);
crc32set(jf_trailer->checksum, crc);
}
static void do_commit_transaction(struct rrdengine_worker_config* wc, uint8_t type, void *data)
{
switch (type) {
case STORE_DATA:
commit_data_extent(wc, (struct extent_io_descriptor *)data);
break;
default:
fatal_assert(type == STORE_DATA);
break;
}
}
static void after_invalidate_oldest_committed(struct rrdengine_worker_config* wc)
{
int error;
error = uv_thread_join(wc->now_invalidating_dirty_pages);
if (error) {
error("uv_thread_join(): %s", uv_strerror(error));
}
freez(wc->now_invalidating_dirty_pages);
wc->now_invalidating_dirty_pages = NULL;
wc->cleanup_thread_invalidating_dirty_pages = 0;
}
static void invalidate_oldest_committed(void *arg)
{
struct rrdengine_instance *ctx = arg;
struct rrdengine_worker_config *wc = &ctx->worker_config;
struct page_cache *pg_cache = &ctx->pg_cache;
int ret;
struct rrdeng_page_descr *descr;
struct page_cache_descr *pg_cache_descr;
Pvoid_t *PValue;
Word_t Index;
unsigned nr_committed_pages;
do {
uv_rwlock_wrlock(&pg_cache->committed_page_index.lock);
for (Index = 0,
PValue = JudyLFirst(pg_cache->committed_page_index.JudyL_array, &Index, PJE0),
descr = unlikely(NULL == PValue) ? NULL : *PValue;
descr != NULL;
PValue = JudyLNext(pg_cache->committed_page_index.JudyL_array, &Index, PJE0),
descr = unlikely(NULL == PValue) ? NULL : *PValue) {
fatal_assert(0 != descr->page_length);
rrdeng_page_descr_mutex_lock(ctx, descr);
pg_cache_descr = descr->pg_cache_descr;
if (!(pg_cache_descr->flags & RRD_PAGE_WRITE_PENDING) && pg_cache_try_get_unsafe(descr, 1)) {
rrdeng_page_descr_mutex_unlock(ctx, descr);
ret = JudyLDel(&pg_cache->committed_page_index.JudyL_array, Index, PJE0);
fatal_assert(1 == ret);
break;
}
rrdeng_page_descr_mutex_unlock(ctx, descr);
}
uv_rwlock_wrunlock(&pg_cache->committed_page_index.lock);
if (!descr) {
info("Failed to invalidate any dirty pages to relieve page cache pressure.");
goto out;
}
pg_cache_punch_hole(ctx, descr, 1, 1, NULL);
uv_rwlock_wrlock(&pg_cache->committed_page_index.lock);
nr_committed_pages = --pg_cache->committed_page_index.nr_committed_pages;
uv_rwlock_wrunlock(&pg_cache->committed_page_index.lock);
rrd_stat_atomic_add(&ctx->stats.flushing_pressure_page_deletions, 1);
rrd_stat_atomic_add(&global_flushing_pressure_page_deletions, 1);
} while (nr_committed_pages >= pg_cache_committed_hard_limit(ctx));
out:
wc->cleanup_thread_invalidating_dirty_pages = 1;
/* wake up event loop */
fatal_assert(0 == uv_async_send(&wc->async));
}
void rrdeng_invalidate_oldest_committed(struct rrdengine_worker_config* wc)
{
struct rrdengine_instance *ctx = wc->ctx;
struct page_cache *pg_cache = &ctx->pg_cache;
unsigned nr_committed_pages;
int error;
if (unlikely(ctx->quiesce != NO_QUIESCE)) /* Shutting down */
return;
uv_rwlock_rdlock(&pg_cache->committed_page_index.lock);
nr_committed_pages = pg_cache->committed_page_index.nr_committed_pages;
uv_rwlock_rdunlock(&pg_cache->committed_page_index.lock);
if (nr_committed_pages >= pg_cache_committed_hard_limit(ctx)) {
/* delete the oldest page in memory */
if (wc->now_invalidating_dirty_pages) {
/* already deleting a page */
return;
}
errno = 0;
error("Failed to flush dirty buffers quickly enough in dbengine instance \"%s\". "
"Metric data are being deleted, please reduce disk load or use a faster disk.", ctx->dbfiles_path);
wc->now_invalidating_dirty_pages = mallocz(sizeof(*wc->now_invalidating_dirty_pages));
wc->cleanup_thread_invalidating_dirty_pages = 0;
error = uv_thread_create(wc->now_invalidating_dirty_pages, invalidate_oldest_committed, ctx);
if (error) {
error("uv_thread_create(): %s", uv_strerror(error));
freez(wc->now_invalidating_dirty_pages);
wc->now_invalidating_dirty_pages = NULL;
}
}
}
void flush_pages_cb(uv_fs_t* req)
{
struct rrdengine_worker_config* wc = req->loop->data;
struct rrdengine_instance *ctx = wc->ctx;
struct page_cache *pg_cache = &ctx->pg_cache;
struct extent_io_descriptor *xt_io_descr;
struct rrdeng_page_descr *descr;
struct page_cache_descr *pg_cache_descr;
unsigned i, count;
xt_io_descr = req->data;
if (req->result < 0) {
++ctx->stats.io_errors;
rrd_stat_atomic_add(&global_io_errors, 1);
error("%s: uv_fs_write: %s", __func__, uv_strerror((int)req->result));
}
#ifdef NETDATA_INTERNAL_CHECKS
{
struct rrdengine_datafile *datafile = xt_io_descr->descr_array[0]->extent->datafile;
debug(D_RRDENGINE, "%s: Extent at offset %"PRIu64"(%u) was written to datafile %u-%u. Waking up waiters.",
__func__, xt_io_descr->pos, xt_io_descr->bytes, datafile->tier, datafile->fileno);
}
#endif
count = xt_io_descr->descr_count;
for (i = 0 ; i < count ; ++i) {
/* care, we don't hold the descriptor mutex */
descr = xt_io_descr->descr_array[i];
pg_cache_replaceQ_insert(ctx, descr);
rrdeng_page_descr_mutex_lock(ctx, descr);
pg_cache_descr = descr->pg_cache_descr;
pg_cache_descr->flags &= ~(RRD_PAGE_DIRTY | RRD_PAGE_WRITE_PENDING);
/* wake up waiters, care no reference being held */
pg_cache_wake_up_waiters_unsafe(descr);
rrdeng_page_descr_mutex_unlock(ctx, descr);
}
if (xt_io_descr->completion)
complete(xt_io_descr->completion);
uv_fs_req_cleanup(req);
free(xt_io_descr->buf);
freez(xt_io_descr);
uv_rwlock_wrlock(&pg_cache->committed_page_index.lock);
pg_cache->committed_page_index.nr_committed_pages -= count;
uv_rwlock_wrunlock(&pg_cache->committed_page_index.lock);
wc->inflight_dirty_pages -= count;
}
/*
* completion must be NULL or valid.
* Returns 0 when no flushing can take place.
* Returns datafile bytes to be written on successful flushing initiation.
*/
static int do_flush_pages(struct rrdengine_worker_config* wc, int force, struct completion *completion)
{
struct rrdengine_instance *ctx = wc->ctx;
struct page_cache *pg_cache = &ctx->pg_cache;
int ret;
int compressed_size, max_compressed_size = 0;
unsigned i, count, size_bytes, pos, real_io_size;
uint32_t uncompressed_payload_length, payload_offset;
struct rrdeng_page_descr *descr, *eligible_pages[MAX_PAGES_PER_EXTENT];
struct page_cache_descr *pg_cache_descr;
struct extent_io_descriptor *xt_io_descr;
void *compressed_buf = NULL;
Word_t descr_commit_idx_array[MAX_PAGES_PER_EXTENT];
Pvoid_t *PValue;
Word_t Index;
uint8_t compression_algorithm = ctx->global_compress_alg;
struct extent_info *extent;
struct rrdengine_datafile *datafile;
/* persistent structures */
struct rrdeng_df_extent_header *header;
struct rrdeng_df_extent_trailer *trailer;
uLong crc;
if (force) {
debug(D_RRDENGINE, "Asynchronous flushing of extent has been forced by page pressure.");
}
uv_rwlock_wrlock(&pg_cache->committed_page_index.lock);
for (Index = 0, count = 0, uncompressed_payload_length = 0,
PValue = JudyLFirst(pg_cache->committed_page_index.JudyL_array, &Index, PJE0),
descr = unlikely(NULL == PValue) ? NULL : *PValue ;
descr != NULL && count != MAX_PAGES_PER_EXTENT ;
PValue = JudyLNext(pg_cache->committed_page_index.JudyL_array, &Index, PJE0),
descr = unlikely(NULL == PValue) ? NULL : *PValue) {
uint8_t page_write_pending;
fatal_assert(0 != descr->page_length);
page_write_pending = 0;
rrdeng_page_descr_mutex_lock(ctx, descr);
pg_cache_descr = descr->pg_cache_descr;
if (!(pg_cache_descr->flags & RRD_PAGE_WRITE_PENDING)) {
page_write_pending = 1;
/* care, no reference being held */
pg_cache_descr->flags |= RRD_PAGE_WRITE_PENDING;
uncompressed_payload_length += descr->page_length;
descr_commit_idx_array[count] = Index;
eligible_pages[count++] = descr;
}
rrdeng_page_descr_mutex_unlock(ctx, descr);
if (page_write_pending) {
ret = JudyLDel(&pg_cache->committed_page_index.JudyL_array, Index, PJE0);
fatal_assert(1 == ret);
}
}
uv_rwlock_wrunlock(&pg_cache->committed_page_index.lock);
if (!count) {
debug(D_RRDENGINE, "%s: no pages eligible for flushing.", __func__);
if (completion)
complete(completion);
return 0;
}
wc->inflight_dirty_pages += count;
xt_io_descr = mallocz(sizeof(*xt_io_descr));
payload_offset = sizeof(*header) + count * sizeof(header->descr[0]);
switch (compression_algorithm) {
case RRD_NO_COMPRESSION:
size_bytes = payload_offset + uncompressed_payload_length + sizeof(*trailer);
break;
default: /* Compress */
fatal_assert(uncompressed_payload_length < LZ4_MAX_INPUT_SIZE);
max_compressed_size = LZ4_compressBound(uncompressed_payload_length);
compressed_buf = mallocz(max_compressed_size);
size_bytes = payload_offset + MAX(uncompressed_payload_length, (unsigned)max_compressed_size) + sizeof(*trailer);
break;
}
ret = posix_memalign((void *)&xt_io_descr->buf, RRDFILE_ALIGNMENT, ALIGN_BYTES_CEILING(size_bytes));
if (unlikely(ret)) {
fatal("posix_memalign:%s", strerror(ret));
/* freez(xt_io_descr);*/
}
(void) memcpy(xt_io_descr->descr_array, eligible_pages, sizeof(struct rrdeng_page_descr *) * count);
xt_io_descr->descr_count = count;
pos = 0;
header = xt_io_descr->buf;
header->compression_algorithm = compression_algorithm;
header->number_of_pages = count;
pos += sizeof(*header);
extent = mallocz(sizeof(*extent) + count * sizeof(extent->pages[0]));
datafile = ctx->datafiles.last; /* TODO: check for exceeded size quota */
extent->offset = datafile->pos;
extent->number_of_pages = count;
extent->datafile = datafile;
extent->next = NULL;
for (i = 0 ; i < count ; ++i) {
/* This is here for performance reasons */
xt_io_descr->descr_commit_idx_array[i] = descr_commit_idx_array[i];
descr = xt_io_descr->descr_array[i];
header->descr[i].type = PAGE_METRICS;
uuid_copy(*(uuid_t *)header->descr[i].uuid, *descr->id);
header->descr[i].page_length = descr->page_length;
header->descr[i].start_time = descr->start_time;
header->descr[i].end_time = descr->end_time;
pos += sizeof(header->descr[i]);
}
for (i = 0 ; i < count ; ++i) {
descr = xt_io_descr->descr_array[i];
/* care, we don't hold the descriptor mutex */
(void) memcpy(xt_io_descr->buf + pos, descr->pg_cache_descr->page, descr->page_length);
descr->extent = extent;
extent->pages[i] = descr;
pos += descr->page_length;
}
df_extent_insert(extent);
switch (compression_algorithm) {
case RRD_NO_COMPRESSION:
header->payload_length = uncompressed_payload_length;
break;
default: /* Compress */
compressed_size = LZ4_compress_default(xt_io_descr->buf + payload_offset, compressed_buf,
uncompressed_payload_length, max_compressed_size);
ctx->stats.before_compress_bytes += uncompressed_payload_length;
ctx->stats.after_compress_bytes += compressed_size;
debug(D_RRDENGINE, "LZ4 compressed %"PRIu32" bytes to %d bytes.", uncompressed_payload_length, compressed_size);
(void) memcpy(xt_io_descr->buf + payload_offset, compressed_buf, compressed_size);
freez(compressed_buf);
size_bytes = payload_offset + compressed_size + sizeof(*trailer);
header->payload_length = compressed_size;
break;
}
extent->size = size_bytes;
xt_io_descr->bytes = size_bytes;
xt_io_descr->pos = datafile->pos;
xt_io_descr->req.data = xt_io_descr;
xt_io_descr->completion = completion;
trailer = xt_io_descr->buf + size_bytes - sizeof(*trailer);
crc = crc32(0L, Z_NULL, 0);
crc = crc32(crc, xt_io_descr->buf, size_bytes - sizeof(*trailer));
crc32set(trailer->checksum, crc);
real_io_size = ALIGN_BYTES_CEILING(size_bytes);
xt_io_descr->iov = uv_buf_init((void *)xt_io_descr->buf, real_io_size);
ret = uv_fs_write(wc->loop, &xt_io_descr->req, datafile->file, &xt_io_descr->iov, 1, datafile->pos, flush_pages_cb);
fatal_assert(-1 != ret);
ctx->stats.io_write_bytes += real_io_size;
++ctx->stats.io_write_requests;
ctx->stats.io_write_extent_bytes += real_io_size;
++ctx->stats.io_write_extents;
do_commit_transaction(wc, STORE_DATA, xt_io_descr);
datafile->pos += ALIGN_BYTES_CEILING(size_bytes);
ctx->disk_space += ALIGN_BYTES_CEILING(size_bytes);
rrdeng_test_quota(wc);
return ALIGN_BYTES_CEILING(size_bytes);
}
static void after_delete_old_data(struct rrdengine_worker_config* wc)
{
struct rrdengine_instance *ctx = wc->ctx;
struct rrdengine_datafile *datafile;
struct rrdengine_journalfile *journalfile;
unsigned deleted_bytes, journalfile_bytes, datafile_bytes;
int ret, error;
char path[RRDENG_PATH_MAX];
datafile = ctx->datafiles.first;
journalfile = datafile->journalfile;
datafile_bytes = datafile->pos;
journalfile_bytes = journalfile->pos;
deleted_bytes = 0;
info("Deleting data and journal file pair.");
datafile_list_delete(ctx, datafile);
ret = destroy_journal_file(journalfile, datafile);
if (!ret) {
generate_journalfilepath(datafile, path, sizeof(path));
info("Deleted journal file \"%s\".", path);
deleted_bytes += journalfile_bytes;
}
ret = destroy_data_file(datafile);
if (!ret) {
generate_datafilepath(datafile, path, sizeof(path));
info("Deleted data file \"%s\".", path);
deleted_bytes += datafile_bytes;
}
freez(journalfile);
freez(datafile);
ctx->disk_space -= deleted_bytes;
info("Reclaimed %u bytes of disk space.", deleted_bytes);
error = uv_thread_join(wc->now_deleting_files);
if (error) {
error("uv_thread_join(): %s", uv_strerror(error));
}
freez(wc->now_deleting_files);
/* unfreeze command processing */
wc->now_deleting_files = NULL;
wc->cleanup_thread_deleting_files = 0;
/* interrupt event loop */
uv_stop(wc->loop);
}
static void delete_old_data(void *arg)
{
struct rrdengine_instance *ctx = arg;
struct rrdengine_worker_config* wc = &ctx->worker_config;
struct rrdengine_datafile *datafile;
struct extent_info *extent, *next;
struct rrdeng_page_descr *descr;
unsigned count, i;
uint8_t can_delete_metric;
uuid_t metric_id;
/* Safe to use since it will be deleted after we are done */
datafile = ctx->datafiles.first;
for (extent = datafile->extents.first ; extent != NULL ; extent = next) {
count = extent->number_of_pages;
for (i = 0 ; i < count ; ++i) {
descr = extent->pages[i];
can_delete_metric = pg_cache_punch_hole(ctx, descr, 0, 0, &metric_id);
if (unlikely(can_delete_metric && ctx->metalog_ctx->initialized)) {
/*
* If the metric is empty, has no active writers and if the metadata log has been initialized then
* attempt to delete the corresponding netdata dimension.
*/
metalog_delete_dimension_by_uuid(ctx->metalog_ctx, &metric_id);
}
}
next = extent->next;
freez(extent);
}
wc->cleanup_thread_deleting_files = 1;
/* wake up event loop */
fatal_assert(0 == uv_async_send(&wc->async));
}
void rrdeng_test_quota(struct rrdengine_worker_config* wc)
{
struct rrdengine_instance *ctx = wc->ctx;
struct rrdengine_datafile *datafile;
unsigned current_size, target_size;
uint8_t out_of_space, only_one_datafile;
int ret, error;
out_of_space = 0;
/* Do not allow the pinned pages to exceed the disk space quota to avoid deadlocks */
if (unlikely(ctx->disk_space > MAX(ctx->max_disk_space, 2 * ctx->metric_API_max_producers * RRDENG_BLOCK_SIZE))) {
out_of_space = 1;
}
datafile = ctx->datafiles.last;
current_size = datafile->pos;
target_size = ctx->max_disk_space / TARGET_DATAFILES;
target_size = MIN(target_size, MAX_DATAFILE_SIZE);
target_size = MAX(target_size, MIN_DATAFILE_SIZE);
only_one_datafile = (datafile == ctx->datafiles.first) ? 1 : 0;
if (unlikely(current_size >= target_size || (out_of_space && only_one_datafile))) {
/* Finalize data and journal file and create a new pair */
wal_flush_transaction_buffer(wc);
ret = create_new_datafile_pair(ctx, 1, ctx->last_fileno + 1);
if (likely(!ret)) {
++ctx->last_fileno;
}
}
if (unlikely(out_of_space && NO_QUIESCE == ctx->quiesce)) {
/* delete old data */
if (wc->now_deleting_files) {
/* already deleting data */
return;
}
if (NULL == ctx->datafiles.first->next) {
error("Cannot delete data file \"%s/"DATAFILE_PREFIX RRDENG_FILE_NUMBER_PRINT_TMPL DATAFILE_EXTENSION"\""
" to reclaim space, there are no other file pairs left.",
ctx->dbfiles_path, ctx->datafiles.first->tier, ctx->datafiles.first->fileno);
return;
}
info("Deleting data file \"%s/"DATAFILE_PREFIX RRDENG_FILE_NUMBER_PRINT_TMPL DATAFILE_EXTENSION"\".",
ctx->dbfiles_path, ctx->datafiles.first->tier, ctx->datafiles.first->fileno);
wc->now_deleting_files = mallocz(sizeof(*wc->now_deleting_files));
wc->cleanup_thread_deleting_files = 0;
error = uv_thread_create(wc->now_deleting_files, delete_old_data, ctx);
if (error) {
error("uv_thread_create(): %s", uv_strerror(error));
freez(wc->now_deleting_files);
wc->now_deleting_files = NULL;
}
}
}
static inline int rrdeng_threads_alive(struct rrdengine_worker_config* wc)
{
if (wc->now_invalidating_dirty_pages || wc->now_deleting_files) {
return 1;
}
return 0;
}
static void rrdeng_cleanup_finished_threads(struct rrdengine_worker_config* wc)
{
struct rrdengine_instance *ctx = wc->ctx;
if (unlikely(wc->cleanup_thread_invalidating_dirty_pages)) {
after_invalidate_oldest_committed(wc);
}
if (unlikely(wc->cleanup_thread_deleting_files)) {
after_delete_old_data(wc);
}
if (unlikely(SET_QUIESCE == ctx->quiesce && !rrdeng_threads_alive(wc))) {
ctx->quiesce = QUIESCED;
complete(&ctx->rrdengine_completion);
}
}
/* return 0 on success */
int init_rrd_files(struct rrdengine_instance *ctx)
{
return init_data_files(ctx);
}
void finalize_rrd_files(struct rrdengine_instance *ctx)
{
return finalize_data_files(ctx);
}
void rrdeng_init_cmd_queue(struct rrdengine_worker_config* wc)
{
wc->cmd_queue.head = wc->cmd_queue.tail = 0;
wc->queue_size = 0;
fatal_assert(0 == uv_cond_init(&wc->cmd_cond));
fatal_assert(0 == uv_mutex_init(&wc->cmd_mutex));
}
void rrdeng_enq_cmd(struct rrdengine_worker_config* wc, struct rrdeng_cmd *cmd)
{
unsigned queue_size;
/* wait for free space in queue */
uv_mutex_lock(&wc->cmd_mutex);
while ((queue_size = wc->queue_size) == RRDENG_CMD_Q_MAX_SIZE) {
uv_cond_wait(&wc->cmd_cond, &wc->cmd_mutex);
}
fatal_assert(queue_size < RRDENG_CMD_Q_MAX_SIZE);
/* enqueue command */
wc->cmd_queue.cmd_array[wc->cmd_queue.tail] = *cmd;
wc->cmd_queue.tail = wc->cmd_queue.tail != RRDENG_CMD_Q_MAX_SIZE - 1 ?
wc->cmd_queue.tail + 1 : 0;
wc->queue_size = queue_size + 1;
uv_mutex_unlock(&wc->cmd_mutex);