diff --git a/ahfe_tutorial/python_tutorial.ipynb b/ahfe_tutorial/python_tutorial.ipynb index c7105c7..3e1d239 100644 --- a/ahfe_tutorial/python_tutorial.ipynb +++ b/ahfe_tutorial/python_tutorial.ipynb @@ -624,7 +624,15 @@ "id": "7f1dfcff-bb06-4508-9f16-4e3de18a5f93", "metadata": {}, "source": [ - "## 4. Running the AHFE simulation using the CLI command `openfe quickrun`" + "## 4. Running the AHFE simulation" + ] + }, + { + "cell_type": "markdown", + "id": "fe618563-c445-4fb3-bc0c-6c08148ddede", + "metadata": {}, + "source": [ + "### (a) Using the CLI" ] }, { @@ -689,10 +697,17 @@ }, { "cell_type": "markdown", - "id": "318ff872", + "id": "bc919dc3-1281-49d2-ad92-4a3355d8bbe5", + "metadata": {}, + "source": [ + "### (b) Using the Python API" + ] + }, + { + "cell_type": "markdown", + "id": "21b64394-fdc7-47e9-aadd-488a55c1d0bb", "metadata": {}, "source": [ - "## 5. Running the AHFE simulation using the Python API\n", "**Creating the `ProtocolDAG`**\n", "\n", "Once we have the two `ChemicalSystem`s, and the `Protocol`, we can create the `ProtocolDAG`.\n",