setup.py

#!/usr/bin/env python
import sys
import os

# setup.py largely based on
#   http://hynek.me/articles/sharing-your-labor-of-love-pypi-quick-and-dirty/
# Also see Jeet Sukumaran's DendroPy

###############################################################################
# setuptools/distutils/etc. import and configuration
try:
    # noinspection PyUnresolvedReferences
    import ez_setup

    try:
        ez_setup_path = " ('" + os.path.abspath(ez_setup.__file__) + "')"
    except OSError:
        ez_setup_path = ""
    sys.stderr.write("using ez_setup%s\n" % ez_setup_path)
    ez_setup.use_setuptools()
    # noinspection PyUnresolvedReferences
    import setuptools

    try:
        setuptools_path = " ('" + os.path.abspath(setuptools.__file__) + "')"
    except OSError:
        setuptools_path = ""
    sys.stderr.write("using setuptools%s\n" % setuptools_path)
    # noinspection PyUnresolvedReferences
    from setuptools import setup, find_packages
except ImportError as e:
    sys.stderr.write("using distutils\n")
    from distutils.core import setup

    sys.stderr.write("using canned package list\n")
    PACKAGES = [
        "peyutil",
        "peyutil.test",
        "peyutil.test.support",
    ]
    EXTRA_KWARGS = {}
else:
    sys.stderr.write("searching for packages\n")
    PACKAGES = find_packages()
    EXTRA_KWARGS = dict(include_package_data=True, test_suite="peyutil.test")

EXTRA_KWARGS["zip_safe"] = True
ENTRY_POINTS = {}
EXTRA_KWARGS["scripts"] = []

###############################################################################
# setuptools/distuils command extensions
try:
    from setuptools import Command
except ImportError:
    sys.stderr.write(
        "setuptools.Command could not be imported: setuptools extensions not available\n"
    )
else:
    sys.stderr.write("setuptools command extensions are available\n")
    command_hook = "distutils.commands"
    ENTRY_POINTS[command_hook] = []

setup(
    name="peyutil",
    version="0.0.5",  # sync with __version__ in peyutil/__init__.py
    description="Utility functions used by other python packages written by the  Open Tree of Life team",
    long_description=(open("README.rst").read()),
    url="https://github.com/OpenTreeOfLife/peyutil",
    license="BSD",
    author="Emily Jane B. McTavish and Mark T. Holder",
    author_email="mtholder@gmail.com",
    py_modules=["peyutil"],
    install_requires=["setuptools", "wheel"],
    packages=PACKAGES,
    entry_points=ENTRY_POINTS,
    classifiers=[
        "Development Status :: 4 - Beta",
        "Intended Audience :: Science/Research",
        "Intended Audience :: Developers",
        "Natural Language :: English",
        "License :: OSI Approved :: BSD License",
        "Operating System :: OS Independent",
        "Programming Language :: Python :: 2.7",
        "Programming Language :: Python :: 3.6",
        "Programming Language :: Python :: 3.7",
        "Programming Language :: Python :: 3.8",
        "Topic :: Scientific/Engineering :: Bio-Informatics",
    ],
    keywords=["bioinformatics", "utility", "phylogenetics"],
    **EXTRA_KWARGS
)