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<div class=WordSection1>
<p class=MsoNormal style='margin-left:36.0pt'><span lang=EN-US
style='mso-ansi-language:EN-US'> <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><u><span lang=EN-US style='mso-ansi-language:
EN-US'>List of Publications</span></u><span lang=EN-US style='mso-ansi-language:
EN-US'> <o:p></o:p></span></p>
<b> <p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>Submitted<o:p></o:p></span></p> </b>
<p class=MsoPlainText style='text-align:justify'><span lang=EN-US
style='font-size:12.0pt;font-family:"Times New Roman","serif";mso-ansi-language:
EN-US'> <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>75.
PAMAM <span class=GramE>dendrimer :</span> a pH controlled <span class=SpellE>nanosponge</span>,
<span class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span>,
(submitted) <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>74.
Sequence dependence of conformation of single strand DNA homo-oligonucleotides
in aqueous solution: Unique structural features of poly-Guanine, <st1:place
w:st="on">S. <span class=SpellE>Saini</span></st1:place>, </span><span
class=SpellE><span lang=EN-US style='color:windowtext;mso-ansi-language:EN-US'>Prabal</span></span><span
lang=EN-US style='color:windowtext;mso-ansi-language:EN-US'> K. <span
class=SpellE>Maiti</span></span><span lang=EN-US style='mso-ansi-language:EN-US'>
and <span class=SpellE>Biman</span> <span class=SpellE>Bagchi</span>,
(submitted JPCB)<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>73.
Effect of <span class=GramE>Mg(</span>+2) ions on the relative stability of JX
DNA crossover motifs, <span class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span>,
<span class=SpellE>Tod</span>. A. Pascal, <span class=SpellE>Nagarajan</span> <span
class=SpellE>Vaidehi</span>, and William A. Goddard III (submitted to
Nanotechnology)<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>72.
Thermodynamics of DNA folding: Theoretical analysis of the helical stacking
preferences in a DNA Three-way junction, <span class=SpellE>Tod</span> A.
Pascal, <span class=SpellE>Prabal</span>. K. <span class=SpellE>Maiti</span>, <span
class=SpellE>Nagarajan</span> <span class=SpellE>Vaidehi</span>, and William A.
Goddard III (submitted to JACS)<o:p></o:p></span></p>
<b> <p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>Published<o:p></o:p></span></p> </b>
<p class=MsoPlainText style='text-align:justify'><span lang=EN-US
style='font-size:12.0pt;font-family:"Times New Roman","serif";mso-ansi-language:
EN-US'> <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>71. Interaction of Nucleic Acids with Carbon Nanotubes and Dendrimers; Bidisha Nandy, Mogurampelly Santosh, and Prabal K Maiti, J. Biosci. (2012) (Just Accepted) <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>70. Transport in nanoporous zeolites: Relationships between sorbate size, entropy, and diffusivity; Bhaskar J. Borah, Prabal K. Maiti, Charusita Chakravarty, and S. Yashonath, J. Chem. Phys. 136, 174510 (2012) <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>69. Dendrimer Building ToolKit: Model Building and Characterization of Various Dendrimer Architectures; Vishal Maingi, Vaibhav Jain, Prasad V. Bharatam, and Prabal K. Maiti, J. Comput. Chem. (2012) (Just Accepted) <a href="http://www.physics.iisc.ernet.in/~maiti/dbt/home.html"> Download Dendrimer Builder ToolKit (DBT)</a>
<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>68. PAMAM Dendrimer-Drug Interactions: Effect of pH on the Binding and Release Pattern; Vishal Maingi, Mattaparthi Venkata Satish Kumar,and Prabal K. Maiti, J. Phys. Chem. B, 116, 4370-4376 (2012) <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>67. Structure of DNA-functionalized dendrimer nanoparticles; Mattaparthi Venkata Satish Kumar and Prabal K. Maiti, Soft Matter, 8, 1893-1900 (2012) <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>66. Unzipping and binding of small interfering RNA with single walled carbon nanotube: A platform for small interfering RNA delivery; Mogurampelly Santosh, Swati Panigrahi, Dhananjay Bhattacharyya, A.K. Sood, Prabal K. Maiti, J. Chem. Phys., 136, 065106 (2012) <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>65. Structural Rigidity of Paranemic and Juxtapose DNA Nanostructures; Mogurampelly Santosh and Prabal K. Maiti,
Biophys. J., 101(6), 1393-1402 (2011)<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>64.
Absolute Entropy and Energy of Carbon-Dioxide using the Two-Phase Thermodynamic
Model; <span class=SpellE>Shao-Nung</span> Huang, <span class=SpellE>Tod</span>
Pascal,<span style='mso-spacerun:yes'> </span>William A. Goddard, <span
class=SpellE>Prabal</span> K <span class=SpellE>Maiti</span>, and<span
style='mso-spacerun:yes'> </span><span class=SpellE>Shiang</span>-Tai Lin, J. Chem. Theory Comput., 7(6), 1893-1901 (2011) <o:p></o:p></span></p>
<p class=MsoNormal style='margin-left:36.0pt'>63. Biopolymers in nanopores:
Challenges and Promises, Hemant Kumar, Yves Lansac, Matthew A Glaser and <span
class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span>, Soft Matter, 7, 5898-5907
(2011) </p>
<p class=MsoNormal style='margin-left:36.0pt'><o:p> </o:p></p>
<p class=MsoNormal style='margin-left:36.0pt'>62. Thermodynamics of water entry
in the hydrophobic channels of carbon nanotube, <span class=SpellE><span
style='mso-fareast-font-family:"MS Mincho"'>Hemant</span></span><span
style='mso-fareast-font-family:"MS Mincho"'> <span class=SpellE>Kumar</span>, <span
class=SpellE>Biswaroop</span> <span class=SpellE>Mukerjee</span>, S. T. Lin, <span
class=SpellE>Chandan</span> <span class=SpellE>Dasgupta</span>, A. K. <span
class=SpellE>Sood</span> and <span class=SpellE><b style='mso-bidi-font-weight:
normal'>Prabal</b></span><b style='mso-bidi-font-weight:normal'> K <span
class=SpellE>Maiti</span></b> , </span>JCP, 134, 124105 (2011)</p>
<p class=MsoNormal style='margin-left:36.0pt'><o:p> </o:p></p>
<p class=MsoNormal style='margin-left:36.0pt'>61. Interaction of Single-Walled
Carbon nanotubes with Poly(Propyl Ether Imine) dendrimers, G. Jayamurugan, K.
S. Vasu, Y. B. R. D. Rajesh, S. Kumar, Prabal K. Maiti, A. K. Sood, and N. <span
class=SpellE>Jayaraman</span>, JCP, 134, 104507 (2011) </p>
<p class=MsoNormal style='margin-left:36.0pt'><o:p> </o:p></p>
<p class=MsoNormal style='margin-left:36.0pt'>60. Verifying Scalings for
Bending rigidity of bilayer membranes using Mesosacle models, F. Thakkar,
Prabal K. Maiti, V. Kumaran and K. G. <span class=SpellE>Ayappa</span>, Soft
Matter, 7, 3963 (2011) </p>
<p class=MsoNormal style='margin-left:36.0pt'><o:p> </o:p></p>
<p class=MsoNormal style='margin-left:36.0pt'>59. DNA compaction by dendrimer,
B. Nandy and Prabal K Maiti, JPCB, 115, 217-230 (2011) </p>
<p class=MsoNormal style='margin-left:36.0pt'><o:p> </o:p></p>
<p class=MsoNormal style='margin-left:36.0pt'>58. Complexation of siRNA with
dendrimer: a molecular modelling approach, V. Vasumathi and Prabal K. Maiti,
Macromolecules, 43, 8264-8274 (2010) </p>
<p class=MsoNormal style='margin-left:36.0pt'><o:p> </o:p></p>
<p class=MsoNormal style='margin-left:36.0pt'>57. Entropy and Dynamics of Water
in Hydration Layers of a Bilayer, A. Debnath, B. Mukherjee, K. G. Ayappa,
Prabal K. Maiti and S. T. Lin JCP, 133, 174704 (2010)</p>
<p class=MsoNormal style='margin-left:36.0pt'><o:p> </o:p></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>56.</span>
Two-Phase Thermodynamic Model for Efficient and Accurate Absolute Entropy of
Water from Molecular Dynamics Simulations, Shiang-Tai Lin, Prabal K. Maiti and
William A. Goddard, J. Phys. Chem. B, 114, 81918198 (2010) <a
href="http://pubs.acs.org/doi/abs/10.1021/jp103120q" (="">(<span class=SpellE>pdf</span>
version of the article)</a> </p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>55.
Single file diffusion of Water inside Narrow Carbon Nanorings , <span
class=SpellE>Biswaroop</span> <span class=SpellE>Mukherjee</span>, <span
class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span> <span
class=SpellE>Chandan</span> <span class=SpellE>Dasgupta</span> and A. K. <span
class=SpellE>Sood</span> ACS Nano,2010, 4 (2), pp 985-991 <a
href="http://pubs.acs.org/doi/abs/10.1021/nn900858a" (="">(<span class=SpellE>pdf</span>
version of the article)</a> <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>54.
</span>Computer simulation of Liquid Crystals, <span class=SpellE>Prabal</span>
K <span class=SpellE>Maiti</span>, V Arun Kumar, and<span lang=EN-US
style='mso-ansi-language:EN-US'>, K G. <span class=SpellE>Ayappa</span> Journal
of Indian Institute of Science, 89, 229-241 (2009) </span><a
href="http://journal.library.iisc.ernet.in/vol200902/Prabal.pdf">(<span
class=SpellE>pdf</span> version of the article)</a> <span lang=EN-US
style='mso-ansi-language:EN-US'><o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>53.
</span>Anomalous diffusion of charged and flexible nanoscopic molecules in
solution: non-<span class=SpellE>Stokesian</span> size dependence for PAMAM
dendrimer and pH dependence, <span class=SpellE>Prabal</span> K. <span
class=SpellE>Maiti</span> and <span class=SpellE>Biman</span> <span
class=SpellE>Bagchi</span> JCP 131, 214901 (2009) </p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>52.
</span>Aggregation Properties of Multi-headed Surfactants in Water as Revealed
from Coarse- grained Molecular Dynamics Simulation", <span class=SpellE>Suman</span>
K <span class=SpellE>Samanta</span>, <span class=SpellE>Santanu</span>
Bhattacharya, and<span lang=EN-US style='mso-ansi-language:EN-US'>, <span
class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span> JPCB, 113,
13545-13550 (2009))<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'> 51.
Jump reorientation of water molecules confined in narrow carbon
nanotubes, <span class=SpellE>Biswaroop</span> <span class=SpellE>Mukherjee</span>,
<span class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span> <span
class=SpellE>Chandan</span> <span class=SpellE>Dasgupta</span> and A. K. <span
class=SpellE>Sood</span> JPCB, 113, 10322-10330 (2009) <a
href="http://pubs.acs.org/doi/abs/10.1021/jp904099f">(<span class=SpellE>pdf</span>
version of the article)</a> <o:p></o:p></span></p>
<p class=MsoNormal style='margin-left:36.0pt'><span lang=EN-US
style='mso-ansi-language:EN-US'>50. </span>The Influence of <span class=SpellE>Bilayer</span>
Composition on the Gel to Liquid Crystalline Transition<span lang=EN-US
style='mso-ansi-language:EN-US'>, </span><span class=SpellE>Ananya</span> <span
class=SpellE>Debnath</span>, K. G. <span class=SpellE>Ayappa</span>, V. <span
class=SpellE>Kumaran</span> and <span class=SpellE><b>Prabal</b></span><b> K <span
class=SpellE>Maiti</span></b>, JPCB, (2009) <a
href="http://pubs.acs.org/doi/abs/10.1021/jp901551d">(<span class=SpellE>pdf</span>
version of the article)</a></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>49.
Water reorientation by large amplitude angular jumps confined in nanoring, <span
class=SpellE>Biswaroop</span> <span class=SpellE>Mukherjee</span>, <span
class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span> <span
class=SpellE>Chandan</span> <span class=SpellE>Dasgupta</span> and A. K. <span
class=SpellE>Sood</span>, JNN, 9, 5303-5306 (2009)<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>48.
Elastic properties of Boron Nitride Nanotube and comparison with Carbon
nanotube, M. <span class=SpellE>Santosh</span>, <span class=SpellE>Prabal</span>
K. <span class=SpellE>Maiti</span> and A. K. <span class=SpellE>Sood</span>,
JNN, 9, 5425-5430 (2009)<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>47.
</span>The poly <span class=SpellE>dA</span> helix: A new structural motif for
high performance DNA-based molecular switches, <span class=SpellE>Saikat</span>
<span class=SpellE>Chakraborty</span>, <span class=SpellE>Suruchi</span>
Sharma, <span class=SpellE><b>Prabal</b></span><b> K <span class=SpellE>Maiti</span></b>,
and Yamuna Krishnan, Nucleic Acids Research, 37, 2810-2817 (2009) <span
lang=EN-US style='mso-ansi-language:EN-US'><a
href="http://nar.oxfordjournals.org/cgi/content/abstract/gkp133">(<span
class=SpellE>pdf</span> version of the article)</a><o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>46.
Structure of PAMAM dendrimers up to limiting generations: A <span class=SpellE>meso</span>
scale description, <span class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span>,
<span class=SpellE>Tahir</span> <span class=SpellE>Cagin</span>, <span
class=SpellE>Shiang</span>-Tai Lin and William A. Goddard III, Journal of
Chemical Physics, 130, </span>144902-144902-10 (2009). <span lang=EN-US
style='mso-ansi-language:EN-US'><a
href="http://scitation.aip.org/getabs/servlet/GetabsServlet?prog=normal&id=JCPSA6000130000014144902000001&idtype=cvips&gifs=yes">(<span
class=SpellE><span class=GramE>pdf</span></span> version of the article)</a><o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>45.
Force </span>induced melting of DNA, M. <span class=SpellE>Santosh</span> and <span
class=SpellE>Prabal</span> K <span class=SpellE>Maiti</span>, JPCM, 21, <span
class=cite1>034113 (2009) </span><span lang=EN-US style='mso-ansi-language:
EN-US'><a
href="http://www.iop.org/EJ/article/0953-8984/21/3/034113/cm9_3_034113.pdf">(<span
class=SpellE>pdf</span> version of the article)</a>.<o:p></o:p></span></p>
<p class=MsoPlainText style='margin-left:36.0pt;text-align:justify'><span
lang=EN-US style='font-size:12.0pt;font-family:"Times New Roman","serif";
mso-ansi-language:EN-US'>44.</span><span lang=EN-US style='mso-ansi-language:
EN-US'> </span><span style='font-size:12.0pt;font-family:"Times New Roman","serif"'>Binding
of DNA <span class=SpellE>Nucleobases</span> and Nucleosides with <span
class=SpellE>Graphen</span><b>, </b><span class=SpellE>Neenu</span> Varghese, <span
class=SpellE>Umesha</span> <span class=SpellE>Mogera</span>, A <span
class=SpellE>Govindaraj</span>, <span class=SpellE>Anindya</span> Das, <span
class=SpellE><b>Prabal</b></span><b> K. <span class=SpellE>Maiti</span></b>,
A. K. <span class=SpellE>Sood</span>, C. N. R. <span
class=SpellE>Rao</span>, <a
href="http://www3.interscience.wiley.com/journal/72514732/home"><span
class=SpellE>Chem</span> Phys <span class=SpellE>Chem</span></a><b>, </b></span><span
class=ti2><span style='font-size:11.0pt;font-family:"Times New Roman","serif"'>10,
206-10</span></span><b><span style='font-size:12.0pt;font-family:"Times New Roman","serif"'>
(2009)</span></b><span style='font-size:12.0pt;font-family:"Times New Roman","serif"'><o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>43.
Strongly anisotropic orientational relaxation of water molecules in narrow
carbon nanotubes and nanorings , <span class=SpellE>Biswaroop</span> <span
class=SpellE>Mukherjee</span>, <span class=SpellE>Prabal</span> K. <span
class=SpellE>Maiti</span> <span class=SpellE>Chandan</span> <span class=SpellE>Dasgupta</span>
and A. K. <span class=SpellE>Sood</span> , </span><span lang=EN-US
style='color:#3333FF;mso-ansi-language:EN-US'>ACS <span class=SpellE>Nano</span></span><span
lang=EN-US style='mso-ansi-language:EN-US'>, </span>2, 1189-1196 <span
lang=EN-US style='mso-ansi-language:EN-US'> (2008) <a
href="http://www.physics.iisc.ernet.in/%7Emaiti/download/maiti_biswa_ACS_nano.pdf">(<span
class=SpellE>pdf</span> version of the article)</a>.<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>42.
Counterion distribution and zeta potential in PAMAM dendrimer, <span
class=SpellE>Prabal</span> K <span class=SpellE>Maiti</span> and Rene Messina, </span><span
lang=EN-US style='color:#3333FF;mso-ansi-language:EN-US'>Macromolecules</span><span
lang=EN-US style='mso-ansi-language:EN-US'>, </span>41, 5002-5008 <span
lang=EN-US style='mso-ansi-language:EN-US'> (2008)<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>41.
Binding of <span class=SpellE>Nucleobases</span> with Single-Walled Carbon
Nanotubes , <span class=SpellE>Anindya</span> Das, A. K. <span class=SpellE>Sood</span>,
<span class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span> <span
class=SpellE>Mili</span> Das, R. <span class=SpellE>Varadaranjan</span>, and C.
N. R. <span class=SpellE>Rao</span>, CPL, 453 266-273 (2008) <a
href="http://dx.doi.org/10.1016/j.cplett.2008.01.057">(<span class=SpellE>pdf</span>
version of the article)</a>.<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>40.
Strong correlations and <span class=SpellE>Fickian</span> water <span
class=SpellE>water</span> diffusion in narrow carbon nanotube, <span
class=SpellE>Biswaroop</span> <span class=SpellE>Mukherjee</span>, <span
class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span> <span
class=SpellE>Chandan</span> <span class=SpellE>Dasgupta</span> and A. K. <span
class=SpellE>Sood</span>, </span><span lang=EN-US style='color:#3333FF;
mso-ansi-language:EN-US'>JCP</span><span lang=EN-US style='mso-ansi-language:
EN-US'>, 126 124704 (2007) <a
href="http://scitation.aip.org/getpdf/servlet/GetPDFServlet?filetype=pdf&id=JCPSA6000126000012124704000001&idtype=cvips&prog=normal">(<span
class=SpellE>pdf</span> version of the article)</a>.<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>39.
Irreversible pressure-induced transformation of Boron Nitride nanotubes, <span
class=SpellE>Surajit</span> <span class=SpellE>Saha</span>, <span class=SpellE>Vikram</span>
<span class=SpellE>Gadagkar</span>, <span class=SpellE>Prabal</span> K. <span
class=SpellE>Maiti</span>, D. V. S. <span class=SpellE>Muthu</span>, D. <span
class=SpellE>Golberg</span>, C. Tang, C. <span class=SpellE>Zhi</span>, Y.
Bando and A. K. <span class=SpellE>Sood</span>, </span><span lang=EN-US
style='color:#3333FF;mso-ansi-language:EN-US'>Journal of <span class=SpellE>Nanoscience</span>
and Nanotechnology</span><span lang=EN-US style='color:black;mso-ansi-language:
EN-US'>, 7, 1810 (2007)</span><span lang=EN-US style='mso-ansi-language:EN-US'>
<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>38.
Double-Walled Carbon Nanotube Bundles Under Hydrostatic Pressure: Raman Experiments
and Simulations, <span class=SpellE>Vikram</span> <span class=SpellE>Gadagkar</span>,
<span class=SpellE>Surajit</span> <span class=SpellE>Saha</span>, D. V. S. <span
class=SpellE>Muthu</span>, <span class=SpellE>Prabal</span> K. <span
class=SpellE>Maiti</span>, Yves <span class=SpellE>Lansac</span>, A. <span
class=SpellE>Jagota</span>, A. <span class=SpellE>Moravsky</span>, R. O. <span
class=SpellE>Loutfy</span> and A. K. <span class=SpellE>Sood</span>, </span><span
lang=EN-US style='color:#3333FF;mso-ansi-language:EN-US'>Journal of <span
class=SpellE>Nanoscience</span> and Nanotechnology</span><span lang=EN-US
style='color:black;mso-ansi-language:EN-US'>, 7, 1753 (2007)</span><span
lang=EN-US style='mso-ansi-language:EN-US'> <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>37.
Structure and Dynamics of confined water inside Carbon nanotube, <span
class=SpellE>Biswaroop</span> <span class=SpellE>Mukherjee</span>, <span
class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span> <span
class=SpellE>Chandan</span> <span class=SpellE>Dasgupta</span> and A. K. <span
class=SpellE>Sood</span>, </span><span lang=EN-US style='color:#3333FF;
mso-ansi-language:EN-US'>Journal of <span class=SpellE>Nanoscience</span> and
Nanotechnology</span><span lang=EN-US style='color:black;mso-ansi-language:
EN-US'>, 7, 1796 (2007)</span><span lang=EN-US style='mso-ansi-language:EN-US'>
<br>
<br>
36. Understanding DNA based Nanostructures, <span class=SpellE>Prabal</span> K.
<span class=SpellE>Maiti</span>, <span class=SpellE><span class=GramE>Tod</span></span>.
A. Pascal, <span class=SpellE>Nagarajan</span> <span class=SpellE>Vaidehi</span>,
and William A. Goddard III<span class=GramE>, <span style='color:#3333FF'>Journal</span></span></span><span
lang=EN-US style='color:#3333FF;mso-ansi-language:EN-US'> of <span
class=SpellE>Nanoscience</span> and Nanotechnology</span><span lang=EN-US
style='color:black;mso-ansi-language:EN-US'>, 7, 1712 (2007)</span><span
lang=EN-US style='mso-ansi-language:EN-US'> <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>35.
Exploring DNA Groove water dynamics through hydrogen bond life time and <span
class=SpellE>orientatioanl</span> relaxation, S. Pal, <span class=SpellE>Prabal</span>
K. <span class=SpellE>Maiti</span> and <span class=SpellE>Biman</span> <span
class=SpellE>Bagchi</span>, </span><span lang=EN-US style='color:#3333FF;
mso-ansi-language:EN-US'>JCP</span><span lang=EN-US style='mso-ansi-language:
EN-US'>, 125, 234903 (2006)<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>34.
Multiple time scales in Solvation Dynamics of DNA in Aqueous Solution: Role of
Water, Counterions, and Cross-<span class=SpellE>Correlationsn</span>, S. Pal, <span
class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span>, James T. Hynes
and <span class=SpellE>Biman</span> <span class=SpellE>Bagchi</span>, </span><span
lang=EN-US style='color:#3333FF;mso-ansi-language:EN-US'>JPCB</span><span
lang=EN-US style='mso-ansi-language:EN-US'>, 110, 26396 (2006)<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>33.
Solvent quality changes the structure of G8 PAMAM dendrimer, a disagreement
with some experimental interpretations, <span class=SpellE>Prabal</span> K. <span
class=SpellE>Maiti</span> and W. A. Goddard III, </span><span lang=EN-US
style='color:#3333FF;mso-ansi-language:EN-US'>JPCB</span><span lang=EN-US
style='mso-ansi-language:EN-US'>, 110, 25628 (2006) <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>32.
Structure and Dynamics of DNA-dendrimer complexation</span><span lang=EN-US
style='font-size:10.0pt;mso-ansi-language:EN-US'>: Role of counterions, water
and base pair sequence, </span><span lang=EN-US style='color:#3333FF;
mso-ansi-language:EN-US'> </span><span class=SpellE><span lang=EN-US
style='mso-ansi-language:EN-US'>Prabal</span></span><span lang=EN-US
style='mso-ansi-language:EN-US'> K. <span class=SpellE>Maiti</span> and <span
class=SpellE>Biman</span> <span class=SpellE>Bagchi</span>, </span><span
lang=EN-US style='color:#3333FF;mso-ansi-language:EN-US'> <span
class=SpellE>Nano</span> Letters </span><span lang=EN-US style='mso-ansi-language:
EN-US'>, 6, 2478 (2006) <a
href="http://www.physics.iisc.ernet.in/%7Emaiti/download/maiti_nano_letter.pdf">(<span
class=SpellE>pdf</span> version of the article)</a>.<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>31.
Entropy of Water in the Hydration Layer of Major and Minor Grooves of DNA, <span
class=SpellE>Biman</span> Jana, <span class=SpellE>Subrata</span> Pal, <span
class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span>, <span
class=SpellE>Shiang</span>-Tai Lin, James T. Hynes, <span class=SpellE>Biman</span>
<span class=SpellE>Bagchi</span>, </span><span lang=EN-US
style='color:#3333FF;mso-ansi-language:EN-US'>JPCB</span><span lang=EN-US
style='mso-ansi-language:EN-US'>, 110, 19611 (2006) <a
href="http://pubs.acs.org/cgi-bin/article.cgi/jpcbfk/2006/110/i39/pdf/jp061588k.pdf">(<span
class=SpellE>pdf</span> version of the article)</a>.<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>30. Structure
of poly(<span class=SpellE>propyl</span> ether <span class=SpellE>imine</span>
) (PETIM) dendrimer from fully atomistic molecular Dynamics Simulation and by
Small Angle X-ray scattering, <span class=SpellE>Chandan</span> Jana, G. <span
class=SpellE>Jayamurugan</span>, R. <span class=SpellE>Ganapathy</span>, <span
class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span>, N. <span
class=SpellE>Jayaraman</span> and A. K. <span class=SpellE>Sood</span>, </span><span
lang=EN-US style='color:#3333FF;mso-ansi-language:EN-US'>JCP</span><span
lang=EN-US style='mso-ansi-language:EN-US'>, 124, 204719 (2006) <a
href="http://scitation.aip.org/getpdf/servlet/GetPDFServlet?filetype=pdf&id=JCPSA6000124000020204719000001&idtype=cvips">(<span
class=SpellE>pdf</span> version of the article)</a>.<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>29.Collapse
of Double-Walled Carbon Nanotube Bundles Under Hydrostatic Pressure, <span
class=SpellE>Vikram</span> <span class=SpellE>Gadagkar</span>, <span
class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span>, Yves <span
class=SpellE>Lansac</span>, A. <span class=SpellE>Jagota</span>, and A. K.
<span class=SpellE>Sood</span>, </span><span lang=EN-US style='color:#3333FF;
mso-ansi-language:EN-US'>PRB</span><span lang=EN-US style='mso-ansi-language:
EN-US'>, 73,085402 (2006) <a
href="http://link.aps.org/abstract/PRB/v73/e085402">(<span class=SpellE>pdf</span>
version of the article)</a>.<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>28.
Atomic Level simulations of Seeman DNA nanostructures: the paranemic crossover
in salt solution, <span class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span>,
<span class=SpellE>Tod</span>. A. Pascal, <span class=SpellE>Nagarajan</span> <span
class=SpellE>Vaidehi</span>, <span class=SpellE>Jiyoung</span> <span
class=SpellE>Heo</span> and William A. Goddard III, </span><span lang=EN-US
style='color:#3333FF;mso-ansi-language:EN-US'>Biophysical Journal</span><span
lang=EN-US style='mso-ansi-language:EN-US'>, 90, 1463-1479, 2006 <a
href="http://www.biophysj.org/cgi/reprint/90/5/1463">(<span class=SpellE>pdf</span>
version of the article)</a>.<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>27.
Anisotropic and sub-diffusive water motion at the surface of a DNA and of an
anionic micelle <span class=SpellE>CsPFO</span>, S. Pal, <span class=SpellE>Prabal</span>
K. <span class=SpellE>Maiti</span> and <span class=SpellE>Biman</span> <span
class=SpellE><span class=GramE>Bagchi</span></span><span class=GramE> ,</span> </span><span
lang=EN-US style='color:#3333FF;mso-ansi-language:EN-US'>Journal of Physics,
Cond. Matter</span><span lang=EN-US style='mso-ansi-language:EN-US'>,
S4317-S4331 (2005)<o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>26.
Dynamics and Thermodynamics of water in PAMAM dendrimers at <span class=SpellE>subnanosecond</span>
time scale, <span class=SpellE>Shiang</span>-Tai Lin, <span class=SpellE>Prabal</span>
K. <span class=SpellE>Maiti</span>, and William A. Goddard III , </span><span
lang=EN-US style='color:#3333FF;mso-ansi-language:EN-US'>Journal of Physical
Chemistry,</span><span lang=EN-US style='mso-ansi-language:EN-US'> 109,
8663-8672, 2005 <a href="http://dx.doi.org/10.1021/jp0471958">(<span
class=SpellE>pdf</span> version of the article)</a>.<br>
<br>
25. The <span class=SpellE>MPSim</span>-Dock Hierarchical Docking algorithm:
Application to the eight <span class=SpellE>Trypsin</span> Inhibitor
co-crystals by Art Cho, John <span class=SpellE>Wendel</span>, <span
class=SpellE>Nagarajan</span> <span class=SpellE>Vaidehi</span>, Peter <span
class=SpellE>Kekenes-Huskey</span>, <span class=SpellE>Wely</span> <span
class=SpellE>Floriano</span>, <span class=SpellE>Prabal</span> K. <span
class=SpellE>Maiti</span>, William Goddard III, </span><span lang=EN-US
style='color:#3333FF;mso-ansi-language:EN-US'>Journal of Computational Chemistry</span><span
lang=EN-US style='mso-ansi-language:EN-US'>, 26, 48-71, 2005
<a
href="http://www3.interscience.wiley.com/cgi-bin/fulltext/109751022/PDFSTART">(<span
class=SpellE>pdf</span> version of the article)</a> <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>24.
The Effect of solvent and pH on the structure of PAMAM dendrimers, <span
class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span>, <span
class=SpellE>Tahir</span> <span class=SpellE>Cagin</span>, <span class=SpellE>Shiang</span>-Tai
Lin and William A. Goddard III, </span><span lang=EN-US style='color:#3333FF;
mso-ansi-language:EN-US'>Macromolecules</span><span lang=EN-US
style='mso-ansi-language:EN-US'>, 38, 979-991, 2005 <a
href="http://pubs.acs.org/cgi-bin/article.cgi/mamobx/2005/38/i03/pdf/ma049168l.pdf">(<span
class=SpellE>pdf</span> version of the article)</a><o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>23.
The stability of Seeman JX DNA topoisomers of paranemic crossover (PX)
molecules as a function of crossover number, <span class=SpellE>Prabal</span>
K. <span class=SpellE>Maiti</span>, <span class=SpellE>Tod</span>. A. Pascal, <span
class=SpellE>Nagarajan</span> <span class=SpellE>Vaidehi</span>, and William A.
Goddard III, </span><span lang=EN-US style='color:#3333FF;mso-ansi-language:
EN-US'>Nucleic Acids <span class=SpellE>Reserach</span></span><span lang=EN-US
style='mso-ansi-language:EN-US'>, 32, 6047-6056, 2004 <a
href="http://nar.oupjournals.org/cgi/content/full/32/20/6047?ijkey=63NzhbdpSFRwA&keyty%0Ape=ref">(<span
class=SpellE>pdf</span> version of the article)</a> <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>22.
Molecular dynamics study of surfactant-mediated <span class=SpellE>decane</span>/water
interface: Effect of molecular architecture of alkyl benzene <span
class=SpellE>sulfonate</span>, <span class=SpellE>Seung</span> Soon Jang, <span
class=SpellE>Shiang</span>-Tai Lin, <span class=SpellE>Prabal</span> K. <span
class=SpellE>Maiti</span></span><span lang=EN-US style='color:#3333FF;
mso-ansi-language:EN-US'>,</span><span lang=EN-US style='mso-ansi-language:
EN-US'> Mario Blanco, William A. Goddard III , Patrick Shuler and <span
class=SpellE>Yongchun</span> Tang, </span><span lang=EN-US style='color:#3333FF;
mso-ansi-language:EN-US'>Journal of Physical Chemistry</span><span lang=EN-US
style='mso-ansi-language:EN-US'> B, 108, 12130-12140, 2004 <a
href="http://pubs3.acs.org/acs/journals/doilookup?in_doi=10.1021/jp048773n">(<span
class=SpellE>pdf</span> version of the article)</a> <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>21.
Structure of PAMAM dendrimers: Generation 1 through 11, <span class=SpellE>Prabal</span>
K. <span class=SpellE>Maiti</span>, <span class=SpellE>Tahir</span> <span
class=SpellE>Cagin</span>, <span class=SpellE>Guofeng</span> Wang and William
A. Goddard III, </span><span lang=EN-US style='color:#3333FF;mso-ansi-language:
EN-US'>Macromolecules</span><span lang=EN-US style='mso-ansi-language:EN-US'>,
37, 6236-6254, 2004 <a
href="http://pubs3.acs.org/acs/journals/doilookup?in_doi=10.1021/ma035629b">(<span
class=SpellE>pdf</span> version of the article)</a> <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>20.
Coarse-grained simulation of polymer translocation through an artificial
nanopore, Yves <span class=SpellE>Lansac</span>, <span class=SpellE>Prabal</span>
K. <span class=SpellE>Maiti</span>, and Matthew A. Glaser, </span><span
lang=EN-US style='color:#3333FF;mso-ansi-language:EN-US'>Polymer</span><span
lang=EN-US style='mso-ansi-language:EN-US'>, 45, 3099, 2004. <a
href="http://www.arxiv.org/pdf/cond-mat/0301406">(<span class=SpellE><span
class=GramE>pdf</span></span> version of the article)</a> <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>19.
Entropy driven Smectic C phase in system of <span class=SpellE>Zig-zag</span>
shaped molecules, <span class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span>,
Yves <span class=SpellE>Lansac</span>, Matthew A. Glaser and Noel A. Clark, </span><span
class=SpellE><span lang=EN-US style='color:#3333FF;mso-ansi-language:EN-US'>Phy</span></span><span
lang=EN-US style='color:#3333FF;mso-ansi-language:EN-US'>. Rev. <span
class=SpellE>Lett</span>.</span><span lang=EN-US style='mso-ansi-language:EN-US'>
<span class=GramE>92, 025501, 2004.</span> <a
href="http://www.arxiv.org/pdf/cond-mat/0303438">(<span class=SpellE><span
class=GramE>pdf</span></span> version of the article)</a> <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>18.
Phase behavior of Bent-core molecules, Yves <span class=SpellE>Lansac</span>, <span
class=SpellE>Prabal</span> K. <span class=SpellE>Maiti</span>, Matthew A.
Glaser and Noel A. Clark, </span><span lang=EN-US style='color:#3333FF;
mso-ansi-language:EN-US'>Phys. Rev. E,</span><span lang=EN-US style='mso-ansi-language:
EN-US'> 67,011703,2003 <a href="http://xxx.lanl.gov/pdf/cond-mat/0202154">(<span
class=SpellE>pdf</span> version of the article)</a> <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>17.
Self-Assembly in Surfactant <span class=SpellE>Oligomers</span>: A
Coarse-Grained Description through Molecular Dynamics Simulations, <span
class=SpellE>Prabal</span> K <span class=SpellE>Maiti</span>, Yves <span
class=SpellE>Lansac</span>, Matthew A. Glaser , Noel A. Clark and <span
class=SpellE>Yannick</span> Rouault, </span><span lang=EN-US
style='color:#3333FF;mso-ansi-language:EN-US'>Langmuir</span><span lang=EN-US
style='mso-ansi-language:EN-US'>, 18, 1908, 2002 <a
href="http://pubs3.acs.org/acs/journals/doilookup?in_doi=10.1021/la0111203">(<span
class=SpellE>pdf</span> version of the article)</a> <o:p></o:p></span></p>
<p style='margin-left:36.0pt'><span lang=EN-US style='mso-ansi-language:EN-US'>16.
<span class=SpellE>Isodesmic</span> self-Assembly in <span class=SpellE>Lyotropic</span>
<span class=SpellE>Chromonic</span> systems, <span class=SpellE>Prabal</span> K
<span class=SpellE>Maiti</span>, Yves <span class=SpellE>Lansac</span>, Matthew
A. Glaser and Noel A. Clark, </span><span lang=EN-US style='color:#3333FF;