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install_bioc 3.19 for rtracklayer in biocdevel action
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Nicole Kramer committed Apr 16, 2024
1 parent 86005ec commit 09643c2
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2 changes: 1 addition & 1 deletion .github/workflows/check-bioc-devel.yml
Original file line number Diff line number Diff line change
Expand Up @@ -205,7 +205,7 @@ jobs:
## This pass does not use AnVIL and will thus update any packages
## that have seen been updated in Bioconductor
message(paste('****', Sys.time(), 'pass number 2 at installing dependencies: any remaining dependencies ****'))
remotes::install_bioc("devel/rtracklayer")
remotes::install_bioc("3.19/rtracklayer")
remotes::install_local(dependencies = TRUE, repos = BiocManager::repositories(), build_vignettes = TRUE, upgrade = TRUE, force = TRUE, build = TRUE)
shell: Rscript {0}

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