amia-paper.tex

\documentclass[10.7pt,]{article}

\usepackage[letterpaper, margin=2.54cm, top=2.54cm]{geometry}
\usepackage[super,comma,sort&compress]{natbib}
\usepackage{lmodern}
\usepackage{authblk} % To add affiliations to authors
\usepackage{amssymb,amsmath}
\usepackage{wrapfig}
\usepackage{graphicx,grffile}
\usepackage[labelfont=bf,labelsep=period]{caption}
\usepackage{ifxetex,ifluatex}
\usepackage{fixltx2e} % provides \textsubscript
\ifnum 0\ifxetex 1\fi\ifluatex 1\fi=0 % if pdftex
  \usepackage[T1]{fontenc}
  \usepackage[utf8]{inputenc}
\else % if luatex or xelatex
  \ifxetex
    \usepackage{mathspec}
  \else
    \usepackage{fontspec}
  \fi
  \defaultfontfeatures{Ligatures=TeX,Scale=MatchLowercase}
    \setmainfont[]{Times New Roman}
    \setsansfont[]{Century Gothic}
    \setmonofont[Mapping=tex-ansi]{Consolas}
\fi
% use upquote if available, for straight quotes in verbatim environments
\IfFileExists{upquote.sty}{\usepackage{upquote}}{}
% use microtype if available
\IfFileExists{microtype.sty}{%
	\usepackage{microtype}
	\UseMicrotypeSet[protrusion]{basicmath} % disable protrusion for tt fonts
}{}

\usepackage{lipsum} % for dummy text only REMOVE

\newtheorem{exm}{Example}


%==============================
% Customization to make the output PDF 
% look similar to the MS Word version
%==============================
% To prevent hyphenation
\hyphenpenalty=10000
\exhyphenpenalty=10000

% To set the sections font size
\usepackage{sectsty}
\allsectionsfont{\fontsize{10}{10}\selectfont}
%\sectionfont{\fontsize{10}{10}\selectfont}
\subsectionfont{\itshape\bfseries\fontsize{10}{10}\selectfont}
\subsubsectionfont{\normalfont\itshape}

% No new line after subsubsection
\makeatletter
\renewcommand\subsubsection{\@startsection{subsubsection}{3}{\z@}%
	{-3.25ex\@plus -1ex \@minus -.2ex}%
    {-1.5ex \@plus -.2ex}% Formerly 1.5ex \@plus .2ex
    {\normalfont\itshape}}
\makeatother

\makeatletter % Reference list option change
\renewcommand\@biblabel[1]{#1.} % from [1] to 1
\makeatother %

% To set the doc title font
\usepackage{etoolbox}
\makeatletter
\patchcmd{\@maketitle}{\LARGE}{\bfseries\fontsize{15}{16}\selectfont}{}{}
\makeatother

% No page numbering
\pagenumbering{gobble}

\makeatletter
\def\maxwidth{\ifdim\Gin@nat@width>\linewidth\linewidth\else\Gin@nat@width\fi}
\def\maxheight{\ifdim\Gin@nat@height>\textheight\textheight\else\Gin@nat@height\fi}
\makeatother

% Scale images if necessary, so that they will not overflow the page
% margins by default, and it is still possible to overwrite the defaults
% using explicit options in \includegraphics[width, height, ...]{}
\setkeys{Gin}{width=\maxwidth,height=\maxheight,keepaspectratio}
\setlength{\parindent}{0pt}
\setlength{\parskip}{6pt plus 2pt minus 1pt}
\setlength{\emergencystretch}{3em}  % prevent overfull lines
\providecommand{\tightlist}{%
  \setlength{\itemsep}{0pt}\setlength{\parskip}{0pt}}
\setcounter{secnumdepth}{0}
% Redefines (sub)paragraphs to behave more like sections
\ifx\paragraph\undefined\else
\let\oldparagraph\paragraph
\renewcommand{\paragraph}[1]{\oldparagraph{#1}\mbox{}}
\fi
\ifx\subparagraph\undefined\else
\let\oldsubparagraph\subparagraph
\renewcommand{\subparagraph}[1]{\oldsubparagraph{#1}\mbox{}}
\fi
%==============================
\usepackage{hyperref}
\hypersetup{
	unicode=true,
	pdftitle={My Cool Title Here},
	pdfauthor={Author One, Author Two, Author Three},
	pdfkeywords={keyword1, keyword2},
	pdfborder={0 0 0},
	breaklinks=true
}
\urlstyle{same}  % don't use monospace font for urls
%==============================

% reduce space between title and begining of page
\title{\vspace{-2em} My Cool Title Here}
\author[ ]{\bf\fontsize{13}{14}\selectfont Author One, MD\textsuperscript{1,2}, Author Two,
PhD\textsuperscript{2}, Author Three,PhD\textsuperscript{1}\vspace{-.7em}}
\affil[1]{\bf\fontsize{13}{14}\selectfont Institution One, Country;}
\affil[2]{\bf\fontsize{13}{14}\selectfont Institution Two, Country}
\date{} % add no date (by default date is added)

%==============================
\begin{document}
\maketitle
\vspace{-4em} %separation between the affiliations and abstract
%==============================

%==============================
\section{Abstract}\label{abstract}
%==============================
\emph{This is a cool work. Cool works must be accepted. So, accept this work.
\lipsum[1]}

%==============================
\section{Introduction}\label{introduction}
%==============================
Use some citation here such as DrugBank\cite{drugbank}, or SIDER\cite{sider}. \lipsum[3-4]

%==============================
\section{Background}\label{background}
%==============================

\lipsum[3-4]

%==============================
\section{Methods}\label{methods}
%==============================

\lipsum[3-4]

%==============================
\subsection{Data sources}\label{data-sources}
%==============================

\lipsum[3-4]

%==============================
\subsection{Measures}\label{measures}
%==============================

%==============================
\subsubsection{A first metric.}\label{metric-1}
%==============================

You can use all the cool math power of \LaTeX{} $A$ is defined as follows:

\lipsum[3-4]

%==============================
\subsubsection{A second metric.}\label{metric-2}
%==============================

\lipsum[3-4]


\begin{exm}

This is an example \lipsum[2]

\end{exm}


%==============================
\subsection{Evaluation}\label{evaluation}
%==============================

\lipsum[3-4]

%==============================
\section{Results}\label{results}
%==============================

\lipsum[3-4]

%==============================
\section{Discussion}\label{discussion}
%==============================

\lipsum[3-4]

%==============================
\section{Conclusion}\label{conclusion}
%==============================

\lipsum[3-4]

%==============================
\section{Acknowledgements}\label{acknowledgements}
%==============================
Remember to acknowledge your funding institution\ldots

%==============================
\bibliographystyle{vancouver}
\bibliography{literature}
%==============================

\end{document}