Fix tests for Julia v1.11

.github/workflows/ci.yml

@@ -18,8 +18,6 @@ jobs:
     steps:
       - uses: actions/checkout@v2
       - uses: julia-actions/setup-julia@v1         
-        with:
-          version: '1.10'
       - run: make lint
   test:
     name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }}
@@ -33,7 +31,7 @@ jobs:
       fail-fast: false
       matrix:
         version:
-          - '1.10'
+          - '1.11'
         os:
           - ubuntu-latest
         arch:

Project.toml

@@ -66,6 +66,7 @@ MatrixCorrectionTools = "1.2.0"
 Optim = "1.0.0"
 Optimisers = "0.2, 0.3"
 PositiveFactorizations = "0.2"
+REPL = "1.11.0"
 Random = "1.9"
 Requires = "1"
 Rocket = "1.8.0"
@@ -95,9 +96,10 @@ Optimisers = "3bd65402-5787-11e9-1adc-39752487f4e2"
 Pkg = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
 PkgBenchmark = "32113eaa-f34f-5b0d-bd6c-c81e245fc73d"
 ReTestItems = "817f1d60-ba6b-4fd5-9520-3cf149f6a823"
+REPL = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"
 StableRNGs = "860ef19b-820b-49d6-a774-d7a799459cd3"
 Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
 TestSetExtensions = "98d24dd4-01ad-11ea-1b02-c9a08f80db04"
 
 [targets]
-test = ["Aqua", "CpuId", "ReTestItems", "Test", "Pkg", "Logging", "InteractiveUtils", "TestSetExtensions", "Coverage", "Dates", "Distributed", "Documenter", "BenchmarkCI", "BenchmarkTools", "PkgBenchmark", "StableRNGs", "Optimisers", "DiffResults", "ExponentialFamilyProjection"]
+test = ["Aqua", "CpuId", "ReTestItems", "Test", "Pkg", "Logging", "InteractiveUtils", "TestSetExtensions", "Coverage", "Dates", "Distributed", "Documenter", "BenchmarkCI", "BenchmarkTools", "PkgBenchmark", "StableRNGs", "Optimisers", "DiffResults", "ExponentialFamilyProjection", "REPL"]

test/ext/ReactiveMPProjectionExt/rules/out_tests.jl

@@ -6,7 +6,7 @@
 
         q_ins_m_out_incomings = [
             (FactorizedJoint((NormalMeanVariance(2, 2),)), NormalMeanVariance(0, 1)),
-            (FactorizedJoint((Gamma(3, 4),)), Gamma(2, 3)),
+            (FactorizedJoint((Gamma(2, 1),)), Gamma(2, 2)),
             (FactorizedJoint((Beta(5, 4),)), Beta(5, 5)),
             (FactorizedJoint((Rayleigh(4),)), Rayleigh(5.2)),
             (FactorizedJoint((Geometric(0.3),)), Geometric(0.9)),

test/nodes/nodes_tests.jl

@@ -144,15 +144,19 @@ end
 end
 
 @testitem "@node macro should generate a documentation entry for a newly specified node" begin
+    using REPL # `REPL` changes the docstring output format
+
     struct DummyNodeForDocumentationStochastic end
     struct DummyNodeForDocumentationDeterministic end
 
     @node DummyNodeForDocumentationStochastic Stochastic [out, x, (y, aliases = [yy])]
 
     @node DummyNodeForDocumentationDeterministic Deterministic [out, (x, aliases = [xx, xxx]), y]
 
-    documentation = string(Base.doc(Base.Docs.Binding(ReactiveMP, :is_predefined_node)))
+    binding = @doc(ReactiveMP.is_predefined_node)
+    @test !isnothing(binding)
 
+    documentation = string(binding)
     @test occursin(r"DummyNodeForDocumentationStochastic.*Stochastic.*out, x, y \(or yy\)", documentation)
     @test occursin(r"DummyNodeForDocumentationDeterministic.*Deterministic.*out, x \(or xx, xxx\), y", documentation)
 end

test/rules/continuous_transition/x_tests.jl

@@ -28,7 +28,7 @@
 
                 metal = CTMeta(transformation)
                 Ly = rand(rng, dy, dy)
-                μy, Σy = rand(rng, dy), Ly * Ly'
+                μy, Σy = rand(rng, dy), Ly * Ly' + dydx * I
 
                 qy = MvNormalMeanCovariance(μy, Σy)
                 qa = MvNormalMeanCovariance(vec(mA), diageye(dydx))
@@ -79,7 +79,7 @@
 
             metal = CTMeta(transformation)
             Ly = rand(rng, dy, dy)
-            μy, Σy = rand(rng, dy), Ly * Ly'
+            μy, Σy = rand(rng, dy), Ly * Ly' + dydx * I
 
             qy = MvNormalMeanCovariance(μy, Σy)
             qa = MvNormalMeanCovariance(vec(mA), diageye(dydx))