NAMESPACE

# Generated by roxygen2: do not edit by hand

export("%>%")
export("analysis_type<-")
export(MidarExperiment)
export(add_lipid_class_transition)
export(analysis_type)
export(apply_qc_filter)
export(calculate_qc_metrics)
export(combine_experiments)
export(corr_batch_centering)
export(corr_drift_fun)
export(corr_drift_gaussiankernel)
export(corr_drift_loess)
export(correct_interference_manually)
export(correct_interferences)
export(cvlog)
export(exportWideCSV)
export(get_stats)
export(import_masshunter_csv)
export(import_masshunter_csv_wide)
export(import_msorganizer_xlm)
export(normalize_by_istd)
export(plot_pca_qc)
export(plot_responsecurves)
export(plot_runscatter)
export(plot_x_vs_y)
export(quantitate_by_istd)
export(read_MRMkit_raw_area_CSV)
export(read_MRMkit_results)
export(read_long_table_csv)
export(read_masshunter_csv)
export(read_msorganizer_xlm)
export(read_table_wide)
export(saveQCinfo)
export(volcano_plot)
export(writeReportXLS)
exportClasses(MidarExperiment)
exportMethods("$")
importFrom(ComplexHeatmap,Heatmap)
importFrom(ComplexHeatmap,Legend)
importFrom(ComplexHeatmap,rowAnnotation)
importFrom(MASS,rlm)
importFrom(broom,glance)
importFrom(dplyr,across)
importFrom(dplyr,all_of)
importFrom(dplyr,anti_join)
importFrom(dplyr,any_of)
importFrom(dplyr,arrange)
importFrom(dplyr,case_when)
importFrom(dplyr,cur_group_id)
importFrom(dplyr,desc)
importFrom(dplyr,distinct)
importFrom(dplyr,do)
importFrom(dplyr,filter)
importFrom(dplyr,full_join)
importFrom(dplyr,group_by)
importFrom(dplyr,if_all)
importFrom(dplyr,if_any)
importFrom(dplyr,if_else)
importFrom(dplyr,inner_join)
importFrom(dplyr,join_by)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,pull)
importFrom(dplyr,relocate)
importFrom(dplyr,rename)
importFrom(dplyr,right_join)
importFrom(dplyr,row_number)
importFrom(dplyr,rowwise)
importFrom(dplyr,select)
importFrom(dplyr,summarise)
importFrom(dplyr,ungroup)
importFrom(fs,dir_ls)
importFrom(fs,file_exists)
importFrom(fs,is_dir)
importFrom(fs,path_tidy)
importFrom(ggh4x,facet_wrap2)
importFrom(ggplot2,Stat)
importFrom(ggplot2,aes)
importFrom(ggplot2,aes_string)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_line)
importFrom(ggplot2,element_rect)
importFrom(ggplot2,element_text)
importFrom(ggplot2,expand_limits)
importFrom(ggplot2,expansion)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_abline)
importFrom(ggplot2,geom_boxplot)
importFrom(ggplot2,geom_hline)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_rect)
importFrom(ggplot2,geom_smooth)
importFrom(ggplot2,geom_vline)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggproto)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,labs)
importFrom(ggplot2,margin)
importFrom(ggplot2,position_dodge)
importFrom(ggplot2,position_jitter)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,scale_shape_manual)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,stat_ellipse)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,theme_light)
importFrom(ggplot2,unit)
importFrom(ggplot2,vars)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(ggpmisc,stat_poly_eq)
importFrom(ggpmisc,stat_poly_line)
importFrom(glue,glue)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(grid,gpar)
importFrom(lubridate,now)
importFrom(magrittr,"%>%")
importFrom(methods,is)
importFrom(methods,new)
importFrom(methods,setValidity)
importFrom(methods,slot)
importFrom(methods,validObject)
importFrom(openxlsx,write.xlsx)
importFrom(purrr,map)
importFrom(purrr,map_dfr)
importFrom(readr,read_csv)
importFrom(readr,write_csv)
importFrom(rlang,":=")
importFrom(rlang,.data)
importFrom(rlang,ensym)
importFrom(rlang,sym)
importFrom(scales,percent_format)
importFrom(stats,as.formula)
importFrom(stats,lm)
importFrom(stats,median)
importFrom(stats,na.exclude)
importFrom(stats,na.omit)
importFrom(stats,p.adjust)
importFrom(stats,prcomp)
importFrom(stats,quantile)
importFrom(stats,sd)
importFrom(stats,setNames)
importFrom(stats,t.test)
importFrom(stringr,regex)
importFrom(stringr,str_detect)
importFrom(stringr,str_extract)
importFrom(stringr,str_remove)
importFrom(stringr,str_replace)
importFrom(stringr,str_squish)
importFrom(stringr,str_trim)
importFrom(tibble,column_to_rownames)
importFrom(tibble,tibble)
importFrom(tibble,tribble)
importFrom(tidyr,drop_na)
importFrom(tidyr,nest)
importFrom(tidyr,pivot_wider)
importFrom(tidyr,unite)
importFrom(tidyr,unnest)
importFrom(tidyselect,vars_select_helpers)
importFrom(utils,head)
importFrom(utils,packageVersion)
importFrom(utils,tail)