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Illumination correction option

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@VictorDidier VictorDidier released this 04 Nov 13:38
· 13 commits to main since this release
v1.1.0
87850ec
  1. Installation of basicpy via RUN pip install in the Dockerfile
  2. Added the -ic flag in the CLI to call the illumination correction on the tiles
  3. If the -ic flag is used, the output images will have the prefix "corr" in the name.
  4. Added the -od argument to specify the name of the deepest output directory. Default value is "raw" to make it compatible with MCMICRO.
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