forked from DrTimothyAldenDavis/SuiteSparse
-
Notifications
You must be signed in to change notification settings - Fork 3
204 lines (174 loc) · 7.34 KB
/
codeql-analysis.yaml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
name: "CodeQL"
on:
workflow_dispatch:
schedule:
# Run job every Saturday at 10:20 UTC
- cron: '20 10 * * 6'
concurrency: codeql-${{ github.ref }}
# # See: https://github.com/github/codeql-action/issues/1082
# env:
# CODEQL_ACTION_EXTRA_OPTIONS: '{"database": {"run-queries": ["--off-heap-ram=0"]}}'
jobs:
ubuntu:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
# Override automatic language detection by changing the below list
# Supported options are ['c-cpp', 'csharp', 'go', 'java-kotlin', 'javascript-typescript', 'python', 'ruby', 'swift']
language: ['c-cpp']
# Learn more...
# https://docs.github.com/en/github/finding-security-vulnerabilities-and-errors-in-your-code/configuring-code-scanning#overriding-automatic-language-detection
# group: [other]
# GraphBLAS and LAGraph disabled (the runners run out of memory or
# disk space)
# group: [other, graph]
include:
- group: other
build-libs: SuiteSparse_config:Mongoose:AMD:BTF:CAMD:CCOLAMD:COLAMD:CHOLMOD:CSparse:CXSparse:LDL:KLU:UMFPACK:ParU:RBio:SPQR:SPEX
# - group: graph
# build-libs: GraphBLAS:LAGraph
name: CodeQL (Ubuntu, ${{ matrix.group }})
steps:
- name: checkout repository
uses: actions/checkout@v4
- name: install dependencies
run: |
sudo apt -qq update
sudo apt install -y g++ gcc autoconf automake cmake \
dvipng gfortran libgmp-dev liblapack-dev libmpfr-dev \
libopenblas-dev nvidia-cuda-dev nvidia-cuda-toolkit
- name: create empty libraries
# This is to work around a bug in nvlink.
# See: https://forums.developer.nvidia.com/t/nvlink-fatal-could-not-open-input-file-when-linking-with-empty-static-library/208517
run: |
touch empty.c
gcc -fPIC -c empty.c -oempty.o
ar rcsv libdl.a empty.o
ar rcsv librt.a empty.o
ar rcsv libpthread.a empty.o
# overwrite system libraries with "valid" empty libraries
sudo mv ./libdl.a /usr/lib/x86_64-linux-gnu/libdl.a
sudo mv ./librt.a /usr/lib/x86_64-linux-gnu/librt.a
sudo mv ./libpthread.a /usr/lib/x86_64-linux-gnu/libpthread.a
- name: initialize CodeQL
# Initialize the CodeQL tools for scanning.
uses: github/codeql-action/init@v3
with:
languages: ${{ matrix.language }}
# If you wish to specify custom queries, you can do so here or in a config file.
# By default, queries listed here will override any specified in a config file.
# Prefix the list here with "+" to use these queries and those in the config file.
# queries: ./path/to/local/query, your-org/your-repo/queries@main
- name: build
# The analysis with factory kernels of the GraphBLAS library is too
# extensive for the free GitHub-hosted runners. Disable them to work
# around that. That means they aren't scanned.
run: |
IFS=':'
BUILD_LIBS="${{ matrix.build-libs }}"
for lib in ${BUILD_LIBS}; do
printf " \033[0;32m==>\033[0m Building library \033[0;32m${lib}\033[0m\n"
echo "::group::Configure $lib"
cd ${GITHUB_WORKSPACE}/${lib}/build
cmake -DCMAKE_BUILD_TYPE="Release" \
-DCMAKE_INSTALL_PREFIX="${GITHUB_WORKSPACE}" \
-DBLA_VENDOR="OpenBLAS" \
-DNSTATIC=ON \
-DCOMPACT=ON \
-DSUITESPARSE_USE_CUDA=ON \
-DCUDAToolkit_INCLUDE_DIRS="/usr/include" \
..
echo "::endgroup::"
echo "::group::Build $lib"
cmake --build . --config Release
echo "::endgroup::"
done
- name: perform CodeQL analysis
uses: github/codeql-action/analyze@v3
with:
category: ${{ matrix.group }}-64
mingw32:
runs-on: windows-latest
defaults:
run:
# Use MSYS2 as default shell
shell: msys2 {0}
strategy:
# Allow other runners in the matrix to continue if some fail
fail-fast: false
matrix:
# Override automatic language detection by changing the below list
# Supported options are ['c-cpp', 'csharp', 'go', 'java-kotlin', 'javascript-typescript', 'python', 'ruby', 'swift']
language: ['c-cpp']
# Learn more...
# https://docs.github.com/en/github/finding-security-vulnerabilities-and-errors-in-your-code/configuring-code-scanning#overriding-automatic-language-detection
group: [other]
# group: [other, graph]
include:
- group: other
build-libs: SuiteSparse_config:Mongoose:AMD:BTF:CAMD:CCOLAMD:COLAMD:CHOLMOD:CSparse:CXSparse:LDL:KLU:UMFPACK:ParU:RBio:SPQR:SPEX
# - group: graph
# build-libs: GraphBLAS:LAGraph
env:
CHERE_INVOKING: 1
name: CodeQL (mingw32, ${{ matrix.group }})
steps:
- name: get CPU name
shell: pwsh
run : |
Get-CIMInstance -Class Win32_Processor | Select-Object -Property Name
- name: install MSYS2 build environment
uses: msys2/setup-msys2@v2
with:
update: true
# Use pre-installed version to save disc space on partition with source.
release: false
install: >-
base-devel
mingw-w64-i686-autotools
mingw-w64-i686-cmake
mingw-w64-i686-cc
mingw-w64-i686-fc
mingw-w64-i686-openblas
mingw-w64-i686-omp
mingw-w64-i686-gmp
mingw-w64-i686-mpfr
msystem: MINGW32
- name: checkout repository
uses: actions/checkout@v4
- name: initialize CodeQL
# Initialize the CodeQL tools for scanning.
uses: github/codeql-action/init@v3
with:
languages: ${{ matrix.language }}
# If you wish to specify custom queries, you can do so here or in a config file.
# By default, queries listed here will override any specified in a config file.
# Prefix the list here with "+" to use these queries and those in the config file.
# queries: ./path/to/local/query, your-org/your-repo/queries@main
- name: build
# The analysis with factory kernels of the GraphBLAS library is too
# extensive for the free GitHub-hosted runners. Disable them to work
# around that. That means they aren't scanned.
run: |
BUILD_LIBS="${{ matrix.build-libs }}"
IFS=':' read -r -a libs <<< "${BUILD_LIBS}"
for lib in "${libs[@]}"; do
printf " \033[0;32m==>\033[0m Building library \033[0;32m${lib}\033[0m\n"
echo "::group::Configure $lib"
cd ${GITHUB_WORKSPACE}/${lib}/build
cmake -DCMAKE_BUILD_TYPE="Release" \
-DCMAKE_INSTALL_PREFIX="${GITHUB_WORKSPACE}" \
-DBLA_VENDOR="OpenBLAS" \
-DNSTATIC=ON \
-DCOMPACT=ON \
..
echo "::endgroup::"
echo "::group::Build $lib"
cmake --build . --config Release
echo "::endgroup::"
done
- name: perform CodeQL analysis
uses: github/codeql-action/analyze@v3
with:
category: ${{ matrix.group }}-32