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TITAN2D make issues #10

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lichen666 opened this issue Jul 25, 2021 · 0 comments
Open

TITAN2D make issues #10

lichen666 opened this issue Jul 25, 2021 · 0 comments

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@lichen666
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lichen666 commented Jul 25, 2021 •
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Hello All,
I am installing titan2d using Ubuntu 18.04 LTS on Windows 10.I encountered some problems, some of which I have solved, but there are still some problems I can't solve.When i compiled Titan2d using

make -j

it was giving me error which says:

lh@DESKTOP-R0338SE:~/TITAN2D/titan_wsp/titan2d_bld/iccoptompmpi$ make -j6
Making all in src
make[1]: Entering directory '/home/lh/TITAN2D/titan_wsp/titan2d_bld/iccoptompmpi/src'
Making all in header
make[2]: Entering directory '/home/lh/TITAN2D/titan_wsp/titan2d_bld/iccoptompmpi/src/header'
make  all-am
make[3]: Entering directory '/home/lh/TITAN2D/titan_wsp/titan2d_bld/iccoptompmpi/src/header'
make[3]: Leaving directory '/home/lh/TITAN2D/titan_wsp/titan2d_bld/iccoptompmpi/src/header'
make[2]: Leaving directory '/home/lh/TITAN2D/titan_wsp/titan2d_bld/iccoptompmpi/src/header'
Making all in gisapi
make[2]: Entering directory '/home/lh/TITAN2D/titan_wsp/titan2d_bld/iccoptompmpi/src/gisapi'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/home/lh/TITAN2D/titan_wsp/titan2d_bld/iccoptompmpi/src/gisapi'
Making all in useful
make[2]: Entering directory '/home/lh/TITAN2D/titan_wsp/titan2d_bld/iccoptompmpi/src/useful'
make[2]: Nothing to be done for 'all'.
make[2]: Leaving directory '/home/lh/TITAN2D/titan_wsp/titan2d_bld/iccoptompmpi/src/useful'
Making all in preproc
make[2]: Entering directory '/home/lh/TITAN2D/titan_wsp/titan2d_bld/iccoptompmpi/src/preproc'
mpic++ -DHAVE_CONFIG_H -I. -I../../../../titan2d/src/preproc -I../../src/header   -DUSE_MPI -DMPICH_IGNORE_CXX_SEEK  -I/home/lh/TITAN2D/titan_wsp/hdf5/include -I/usr/include/gdal -I../../../../titan2d/src/preproc/../gisapi -I../../../../titan2d/src/preproc/../useful -std=c++11 -O3 -fopenmp -MT libtitan_preprocess_a-preprocess.o -MD -MP -MF .deps/libtitan_preprocess_a-preprocess.Tpo -c -o libtitan_preprocess_a-preprocess.o `test -f 'preprocess.C' || echo '../../../../titan2d/src/preproc/'`preprocess.C
mpic++ -DHAVE_CONFIG_H -I. -I../../../../titan2d/src/preproc -I../../src/header   -DUSE_MPI -DMPICH_IGNORE_CXX_SEEK  -I/home/lh/TITAN2D/titan_wsp/hdf5/include -I/usr/include/gdal -I../../../../titan2d/src/preproc/../gisapi -I../../../../titan2d/src/preproc/../useful -std=c++11 -O3 -fopenmp -MT libtitan_preprocess_a-createfunky.o -MD -MP -MF .deps/libtitan_preprocess_a-createfunky.Tpo -c -o libtitan_preprocess_a-createfunky.o `test -f 'createfunky.C' || echo '../../../../titan2d/src/preproc/'`createfunky.C
In file included from ../../../../titan2d/src/preproc/../header/hpfem.h:40:0,
                 from ../../../../titan2d/src/preproc/../header/integrators.h:19,
                 from ../../../../titan2d/src/preproc/../header/titan_simulation.h:27,
                 from ../../../../titan2d/src/preproc/preprocess.C:33:
../../../../titan2d/src/preproc/../header/properties.h: In member function ‘void TiScale::h5write(H5::CommonFG*, std::__cxx11::string) const’:
../../../../titan2d/src/preproc/../header/properties.h:91:33: error: ‘class H5::CommonFG’ has no member named ‘createGroup’
         H5::Group group(parent->createGroup(group_name));
                                 ^
../../../../titan2d/src/preproc/../header/properties.h: In member function ‘void TiScale::h5read(const H5::CommonFG*, std::__cxx11::string)’:
../../../../titan2d/src/preproc/../header/properties.h:103:33: error: ‘const class H5::CommonFG’ has no member named  ‘openGroup’
         H5::Group group(parent->openGroup(group_name));
                                 ^
In file included from ../../../../titan2d/src/preproc/../header/hpfem.h:40:0,
                 from ../../../../titan2d/src/preproc/../header/integrators.h:19,
                 from ../../../../titan2d/src/preproc/../header/titan_simulation.h:27,
                 from ../../../../titan2d/src/preproc/preproc.h:28,
                 from ../../../../titan2d/src/preproc/createfunky.C:33:
../../../../titan2d/src/preproc/../header/properties.h: In member function ‘void TiScale::h5write(H5::CommonFG*, std::__cxx11::string) const’:
../../../../titan2d/src/preproc/../header/properties.h:91:33: error: ‘class H5::CommonFG’ has no member named ‘createGroup’
         H5::Group group(parent->createGroup(group_name));
                                 ^
../../../../titan2d/src/preproc/../header/properties.h: In member function ‘void TiScale::h5read(const H5::CommonFG*, std::__cxx11::string)’:
../../../../titan2d/src/preproc/../header/properties.h:103:33: error: ‘const class H5::CommonFG’ has no member named  ‘openGroup’
         H5::Group group(parent->openGroup(group_name));
                                 ^
In file included from ../../../../titan2d/src/preproc/../header/hpfem.h:40:0,
                 from ../../../../titan2d/src/preproc/../header/integrators.h:19,
                 from ../../../../titan2d/src/preproc/../header/titan_simulation.h:27,
                 from ../../../../titan2d/src/preproc/preprocess.C:33:
../../../../titan2d/src/preproc/../header/properties.h: In member function ‘void TimeProps::h5write(H5::CommonFG*, std::__cxx11::string) const’:
../../../../titan2d/src/preproc/../header/properties.h:584:33: error: ‘class H5::CommonFG’ has no member named ‘createGroup’
         H5::Group group(parent->createGroup(group_name));
                                 ^
../../../../titan2d/src/preproc/../header/properties.h: In member function ‘void TimeProps::h5read(const H5::CommonFG*, std::__cxx11::string)’:
../../../../titan2d/src/preproc/../header/properties.h:606:33: error: ‘const class H5::CommonFG’ has no member named  ‘openGroup’
         H5::Group group(parent->openGroup(group_name));
                                 ^
In file included from ../../../../titan2d/src/preproc/../header/hpfem.h:40:0,
                 from ../../../../titan2d/src/preproc/../header/integrators.h:19,
                 from ../../../../titan2d/src/preproc/../header/titan_simulation.h:27,
                 from ../../../../titan2d/src/preproc/preproc.h:28,
                 from ../../../../titan2d/src/preproc/createfunky.C:33:
../../../../titan2d/src/preproc/../header/properties.h: In member function ‘void TimeProps::h5write(H5::CommonFG*, std::__cxx11::string) const’:
../../../../titan2d/src/preproc/../header/properties.h:584:33: error: ‘class H5::CommonFG’ has no member named ‘createGroup’
         H5::Group group(parent->createGroup(group_name));
                                 ^
../../../../titan2d/src/preproc/../header/properties.h: In member function ‘void TimeProps::h5read(const H5::CommonFG*, std::__cxx11::string)’:
../../../../titan2d/src/preproc/../header/properties.h:606:33: error: ‘const class H5::CommonFG’ has no member named  ‘openGroup’
         H5::Group group(parent->openGroup(group_name));
                                 ^
../../../../titan2d/src/preproc/preprocess.C: In function ‘void Write_data(int, int, int, int, int, NodePreproc*, ElementPreproc**, BoundaryPreproc*, unsigned int*, unsigned int*, double*, double*, char**, double*, double*)’:
../../../../titan2d/src/preproc/preprocess.C:652:43: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
         FILE *fp = fopen_bin(filename, "w");
                                           ^
Makefile:493: recipe for target 'libtitan_preprocess_a-createfunky.o' failed
make[2]: *** [libtitan_preprocess_a-createfunky.o] Error 1
make[2]: *** Waiting for unfinished jobs....
Makefile:465: recipe for target 'libtitan_preprocess_a-preprocess.o' failed
make[2]: *** [libtitan_preprocess_a-preprocess.o] Error 1
make[2]: Leaving directory '/home/lh/TITAN2D/titan_wsp/titan2d_bld/iccoptompmpi/src/preproc'
Makefile:356: recipe for target 'all-recursive' failed
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory '/home/lh/TITAN2D/titan_wsp/titan2d_bld/iccoptompmpi/src'
Makefile:382: recipe for target 'all-recursive' failed
make: *** [all-recursive] Error 1

By the way,I found some error in the tutorial

../../titan2d/configure --prefix=`pwd` --with-gdal=$TITAN_GDAL --with-hdf5=$TITAN_HDF5 \
--with-swig=$TITAN_SWIG PYTHON=$TITAN_PYTHON/bin/python2.7\
--enable-mpi --enable-openmp CXX=mpic++ CXXFLAGS=-O3 --disable-java-gui

We need to add a space after python 2.7

../../titan2d/configure --prefix=`pwd` --with-gdal=$TITAN_GDAL --with-hdf5=$TITAN_HDF5 \
--with-swig=$TITAN_SWIG PYTHON=$TITAN_PYTHON/bin/python2.7 \
--enable-mpi --enable-openmp CXX=mpic++ CXXFLAGS=-O3 --disable-java-gui

Otherwise, an error will be reported #9

error: Python interpreter is too old

And we need to rename README.md to README
Otherwise,when we input

aclocal;autoheader;autoconf;automake --add-missing --copy

it would report an error

lh@DESKTOP-R0338SE:~/TITAN2D/titan_wsp/titan2d$ aclocal;autoheader;autoconf;automake --add-missing --copy
Makefile.am: error: required file './README' not found
/usr/share/automake-1.15/am/java.am: warning: JAVAROOT was already defined in condition ENABLE_JAVA_GUI, which is included in condition TRUE ...
gui/Makefile.am:16:   while processing 'dist_noinst_JAVA'
gui/Makefile.am:14: ... 'JAVAROOT' previously defined here
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@lichen666