DESCRIPTION

Type: Package
Package: nanostringr
Title: Performs Quality Control, Data Normalization, and Batch Effect
    Correction for 'NanoString nCounter' Data
Version: 0.5.0
Authors@R: c(
    person("Derek", "Chiu", , "dchiu@bccrc.ca", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0002-7591-4881")),
    person("Aline", "Talhouk", , "atalhouk@bccrc.ca", role = "aut",
           comment = c(ORCID = "0000-0001-7760-410X")),
    person("Samuel", "Leung", , "Samuel.Leung@vch.ca", role = "aut",
           comment = c(ORCID = "0000-0003-0138-7254"))
  )
Description: Provides quality control (QC), normalization, and batch
    effect correction operations for 'NanoString nCounter' data, Talhouk
    et al. (2016) <doi:10.1371/journal.pone.0153844>.  Various metrics are
    used to determine which samples passed or failed QC.  Gene expression
    should first be normalized to housekeeping genes, before a
    reference-based approach is used to adjust for batch effects.  Raw
    NanoString data can be imported in the form of Reporter Code Count
    (RCC) files.
License: MIT + file LICENSE
URL: https://github.com/TalhoukLab/nanostringr/,
    https://talhouklab.github.io/nanostringr/
BugReports: https://github.com/TalhoukLab/nanostringr/issues
Depends: 
    R (>= 3.5.0)
Imports: 
    assertthat,
    ccaPP,
    dplyr,
    purrr,
    rlang,
    tidyr
Suggests: 
    covr,
    knitr,
    rmarkdown,
    testthat
VignetteBuilder: 
    knitr
Encoding: UTF-8
LazyData: TRUE
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2