diff --git a/easystacks/pilot.nessi.no/2023.06/eessi-2023.06-eb-4.9.1-2022b.yml b/easystacks/pilot.nessi.no/2023.06/eessi-2023.06-eb-4.9.1-2022b.yml index f9bfaca153..e29f398765 100644 --- a/easystacks/pilot.nessi.no/2023.06/eessi-2023.06-eb-4.9.1-2022b.yml +++ b/easystacks/pilot.nessi.no/2023.06/eessi-2023.06-eb-4.9.1-2022b.yml @@ -6,4 +6,5 @@ easyconfigs: - bokeh-3.2.1-foss-2022b.eb - MDAnalysis-2.4.2-foss-2022b.eb - arrow-R-11.0.0.3-foss-2022b-R-4.2.2.eb + - biom-format-2.1.15-foss-2022b.eb - ParaView-5.11.1-foss-2022b.eb diff --git a/easystacks/pilot.nessi.no/2023.06/eessi-2023.06-eb-4.9.1-2023a.yml b/easystacks/pilot.nessi.no/2023.06/eessi-2023.06-eb-4.9.1-2023a.yml index db74ac4d6a..ba42cffaa6 100644 --- a/easystacks/pilot.nessi.no/2023.06/eessi-2023.06-eb-4.9.1-2023a.yml +++ b/easystacks/pilot.nessi.no/2023.06/eessi-2023.06-eb-4.9.1-2023a.yml @@ -11,7 +11,15 @@ easyconfigs: - R-bundle-CRAN-2023.12-foss-2023a.eb - OpenFOAM-10-foss-2023a.eb - PyOpenGL-3.1.7-GCCcore-12.3.0.eb - - ipympl-0.9.3-foss-2023a.eb + # replaced by ipympl-0.9.3-gfbf-2023a.eb + # - ipympl-0.9.3-foss-2023a.eb + - ipympl-0.9.3-gfbf-2023a.eb: + options: + # see https://github.com/easybuilders/easybuild-easyconfigs/pull/20586 + # which removed the foss/2023a ec file + # see https://github.com/easybuilders/easybuild-easyconfigs/pull/18852 + # which added/updated the gfbf/2023a ec file + from-pr: 18852 - SuperLU_DIST-8.1.2-foss-2023a.eb: options: from-pr: 20162 @@ -40,3 +48,7 @@ easyconfigs: options: from-pr: 20540 - WhatsHap-2.2-foss-2023a.eb + - GATK-4.5.0.0-GCCcore-12.3.0-Java-17.eb + - ESPResSo-4.2.2-foss-2023a.eb: + options: + from-pr: 20595 diff --git a/easystacks/pilot.nessi.no/2023.06/eessi-2023.06-eb-4.9.1-2023b.yml b/easystacks/pilot.nessi.no/2023.06/eessi-2023.06-eb-4.9.1-2023b.yml index 12564d9cb9..5a7453a9c0 100644 --- a/easystacks/pilot.nessi.no/2023.06/eessi-2023.06-eb-4.9.1-2023b.yml +++ b/easystacks/pilot.nessi.no/2023.06/eessi-2023.06-eb-4.9.1-2023b.yml @@ -23,3 +23,4 @@ easyconfigs: options: from-pr: 20439 - GDB-13.2-GCCcore-13.2.0.eb + - IPython-8.17.2-GCCcore-13.2.0.eb diff --git a/test_suite.sh b/test_suite.sh index f213ad68a3..2f304dd9bc 100755 --- a/test_suite.sh +++ b/test_suite.sh @@ -183,7 +183,16 @@ else fi # List the tests we want to run -export REFRAME_ARGS='--tag CI --tag 1_node --nocolor --exclude=TensorFlow' +# export REFRAME_ARGS='--tag CI --tag 1_node --nocolor --exclude=TensorFlow' +export REFRAME_FLAGS='--nocolor' +export REFRAME_TAGS='--tag CI --tag 1_node' +# Limit test names to relevant tests +# For now, we limit to OSU. +# In the future, we should create some mapping between module names of modules that are deployed. +# E.g. if TensorFlow was deployed, we want to run with `-n TensorFlow`. If OpenMPI was deployed +# we want to run with `-n OSU`, or maybe even `-n OSU -n GROMACS.*foss` to also test _one_ OpenMPI application +export REFRAME_INCLUDE_PATTERNS='-n OSU' +export REFRAME_ARGS="${REFRAME_FLAGS} ${REFRAME_TAGS} ${REFRAME_INCLUDE_PATTERNS}" echo "Listing tests: reframe ${REFRAME_ARGS} --list" reframe ${REFRAME_ARGS} --list if [[ $? -eq 0 ]]; then