DESCRIPTION

Package: scCTS
Type: Package
Title: Population-level Differetial Expression Analysis for single-cell RNA-seq
Version: 0.1.0
Authors@R: c(
    person("Luxiao", "Chen", 
           email = "luxiao.chen@emory.edu", 
           role = c("aut")),
    person("Tao", "Deng", 
           email = "taodeng@link.cuhk.edu.cn", 
           role = c("aut", "cre"),
           comment = c(ORCID = "0000-0001-7401-311X"))
    )
Description: scCTS is an R package for the statistical modeling of the 
    gene differential expression. It identifies cell-type specific genes (markers)
    that consistently appear in historical population-level scRNA-seq (scRNA-seq) data.
License: GPL-3 + file LICENSE
Encoding: UTF-8
LazyData: true
LazyDataCompression: bzip2
RoxygenNote: 7.3.1
Depends: 
    R (>= 4.1.0)
Imports:
    abind,
    BiocParallel,
    cli,
    doParallel,
    DelayedArray,
    data.table,
    dplyr,
    foreach,
    iterators,
    matrixTests,
    methods,
    Matrix,
    parallel,
    purrr,
    SummarizedExperiment,
    SingleCellExperiment,
    S4Vectors,
    stringr,
    readr,
    tibble,
Suggests: 
    knitr,
    rmarkdown,
    BiocStyle,
    scater,
    zinbwave,
    DESeq2,
    reticulate,
    FEAST,
VignetteBuilder: knitr