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CASPERinfo
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CASPERinfo
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CASPER Program Information v1.0
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DIRECTORY:Where would you like to store CASPER database files?
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ENDONUCLEASES
spCas9;NGG;4;16;0;3;Streptococcus pyogenes;II-A;CRISPRSCAN;HSU MATRIX-spCas9-2013
saCas9;NNGRRT;4;16;0;3;Staphylococcus aureus;II-A;CRISPRSCAN;HSU MATRIX-saCas9-2017
spCas9-VRER;NGCG;4;16;0;3;Streptococcus pyogenes engineered variant;II-A;CRISPRSCAN;HSU MATRIX-spCas9-2013
st1Cas9;NNAGAAW;8;16;0;3;Streptococcus thermophilus;II-C;CRISPRSCAN;HSU MATRIX-spCas9-2013
nmeCas9;NNNNGATT;8;16;0;3;Neisseria meningitidis;II-C;CRISPRSCAN;HSU MATRIX-spCas9-2013
asCas12;TTTV;0;16;8;5;Acidimonaccocus;V-A;CRISPRSCAN;HSU MATRIX-asCas12-2016
LbCpf1;TTTV,TCTN;0;16;8;5;Lachnospiraceae bacterium;V-A;CRISPRSCAN;HSU MATRIX-asCas12-2016
LbuCas13a;HN;4;12;4;5;Leptospirae buccalis;VI-A;CRISPRSCAN;HSU MATRIX-spCas9-2013
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ON-TARGET DATA
DATA:CRISPRSCAN
AA 19 -0.097377097
TT 18 -0.094424075
TT 13 -0.08618771
CT 26 -0.084264893
GC 25 -0.073453609
Tx 21 -0.068730497
TG 23 -0.066388075
AG 23 -0.054338456
Gx 30 -0.046315914
Ax 04 -0.042153521
AG 34 -0.041935908
GA 34 -0.037797707
Ax 18 -0.033820432
Cx 25 -0.031648353
Cx 31 -0.030715556
Gx 01 -0.029693709
Cx 16 -0.021638609
Ax 14 -0.018487229
Ax 11 -0.018287292
Tx 34 -0.017647692
AA 10 -0.016905415
Ax 19 -0.015576499
Gx 34 -0.014167123
Cx 30 -0.013182733
GA 31 -0.01227989
Tx 24 -0.011996172
Ax 15 -0.010595296
Gx 04 -0.005448869
GG 09 -0.00157799
Tx 23 -0.001422243
Cx 15 -0.000477727
Cx 26 -0.000368973
Tx 27 -0.000280845
Ax 31 0.00158975
GT 18 0.002391744
Cx 09 0.002449224
GA 20 0.009740799
Ax 25 0.010506405
Ax 12 0.011633235
Ax 32 0.012435231
Tx 22 0.013224035
Cx 20 0.015089514
Gx 17 0.01549378
Gx 18 0.016457816
Tx 30 0.017263162
Ax 13 0.017628924
Gx 19 0.017916844
Ax 27 0.019126815
Gx 11 0.020929039
TG 03 0.022949996
GC 03 0.024681785
Gx 14 0.025116714
GG 10 0.026802158
Gx 12 0.027591138
Gx 32 0.03071249
Ax 22 0.031930909
Gx 20 0.033957008
Cx 21 0.034262921
TT 17 0.03492881
Tx 13 0.035445171
Gx 26 0.036146649
Ax 24 0.037466478
Cx 22 0.03763162
Gx 16 0.037970942
GG 12 0.041883009
TG 18 0.045908991
TG 31 0.048136812
Ax 35 0.048596259
Gx 15 0.051129717
Cx 24 0.052972314
TG 15 0.053372822
GT 11 0.053678436
GC 09 0.054171402
CA 30 0.057759851
GT 24 0.060952114
Gx 13 0.061360905
CA 24 0.06221937
AG 10 0.063717093
Gx 10 0.067739182
Cx 13 0.069495944
GT 31 0.07342535
GG 13 0.074355848
Cx 27 0.079933922
Gx 27 0.085151052
CC 21 0.088919601
CC 23 0.095072286
Gx 22 0.10114438
Gx 24 0.105488325
GT 23 0.106718563
GG 25 0.111559441
Gx 09 0.11460068
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OFF-TARGET MATRICES
MATRIX:HSU MATRIX-spCas9-2013
1 1.653312217 0.903020898 1.597721072 0.923530678 0.807022991 0.963232124 1.01625944 0.26584025 0.711884156 1.521066692 0.694185851 1.043403879 0.52549235 0.898073668 0.716358798 0.839891532 0.537606185 0.282072211 0.689780687
1 1.514208159 1.159682815 1.658152541 0.992387533 0.024710323 0.552164002 1.8686911 0.773675684 0.927047872 0.729154118 0.48415093 0.482360483 0.705976348 1.022086513 0.018107063 0.349616508 0.181070971 0.136179168 0.270019825
1 1.323358326 1.415685748 1.296737018 1.205954808 0.95239301 0.230357513 1.016250559 0.810035714 1.155940112 0.707528464 1.579071836 0.348976795 0.089927088 0.04966372 0.004546068 0.226670927 0.215301755 0.525028618 0.496472865
1 1.536590735 1.27712259 1.268864823 1.219746615 1.064452173 0.779052105 1.24449999 0.988456707 1.53185795 0.718418143 1.73814687 0.416561912 0.128509362 0.071959174 0.054924206 0.226053995 0.311857733 0.134281319 0.060056479
1 1.734698905 0.821526176 1.157934409 1.181552961 0.738011252 0.900417256 0.836770787 0.299685354 0.62100718 1.14001417 0.356050082 0.619215107 0.179895816 0.266509558 0.279295225 0.261310401 0.115211807 0.168000344 0.337223457
1 1.018630984 0.964947064 2.250415945 1.622197865 0.240529657 0.75614004 1.065079759 0.110193397 1.4293465 0.35333324 0.617817481 0.726931853 0.116486245 0.036677831 0.50126924 0.414700936 0.178570178 0.531452139 0.166382281
1 1.671881765 0.968782834 1.073187004 1.086889349 0.647532031 1.014157582 0.863503533 0.305879186 0.448727403 0.904623856 0.432695002 0.5575506 0.137942313 0.072221711 0.327875553 0.242026012 0.043264802 0.135104168 0.440303113
1 1.16622155 0.454444131 2.786745287 1.046113038 0.60357013 0.813153469 0.787503713 0.688216641 1.365452127 0.123994188 0.195339521 0.249708488 0.01322757 0.022744096 0.047756641 0.368206347 0.317460049 0.562057357 0.458774127
1 1.191602132 1.095411389 2.870906184 1.130955312 0.515958107 0.643922558 1.032247542 0.535596183 1.286750463 0.07797037 0.259177567 0.267506677 0.046859394 0.025188071 0.005241839 0.021754414 0.171770967 0.697036065 0.271959618
1 1.478634617 1.082002774 1.295205389 0.744956324 0.976263629 0.491187717 0.927208246 0.602176238 1.037514324 0.304721275 0.820965614 0.03030029 0.036503049 0.059154973 0.025303057 0.155294081 0.100600517 0.217519417 0.027493368
1 0.040034608 0.995399409 1.646620387 1.341048155 0.010174614 0.54281779 2.340127222 0.436699042 0.214279635 0.340470548 0.263954537 0.09350449 0.046215969 0.068822052 0.016462872 0.36587133 0.054631234 0.085714515 0.254333541
1 0.034458518 1.047816491 1.050709161 1.407539975 0.054046079 0.639614156 2.080996466 0.458455298 0.155528383 0.136908112 0.10261082 0.041691214 0.010531506 0.045811702 0.009880719 0.211364672 0.055185616 0.025314601 0.059633277
MATRIX:HSU MATRIX-asCas12-2016
1.00000 1.00000 1.00000 1.00000 1.00000 1.653312217 0.903020898 1.597721072 0.923530678 0.807022991 0.963232124 1.01625944 0.26584025 0.711884156 1.521066692 0.694185851 1.043403879 0.52549235 0.898073668 0.716358798 0.839891532 0.537606185 0.282072211 0.689780687
1.00000 1.00000 1.00000 1.00000 1.00000 1.514208159 1.159682815 1.658152541 0.992387533 0.024710323 0.552164002 1.8686911 0.773675684 0.927047872 0.729154118 0.48415093 0.482360483 0.705976348 1.022086513 0.018107063 0.349616508 0.181070971 0.136179168 0.270019825
1.00000 1.00000 1.00000 1.00000 1.00000 1.323358326 1.415685748 1.296737018 1.205954808 0.95239301 0.230357513 1.016250559 0.810035714 1.155940112 0.707528464 1.579071836 0.348976795 0.089927088 0.04966372 0.004546068 0.226670927 0.215301755 0.525028618 0.496472865
1.00000 1.00000 1.00000 1.00000 1.00000 1.536590735 1.27712259 1.268864823 1.219746615 1.064452173 0.779052105 1.24449999 0.988456707 1.53185795 0.718418143 1.73814687 0.416561912 0.128509362 0.071959174 0.054924206 0.226053995 0.311857733 0.134281319 0.060056479
1.00000 1.00000 1.00000 1.00000 1.00000 1.734698905 0.821526176 1.157934409 1.181552961 0.738011252 0.900417256 0.836770787 0.299685354 0.62100718 1.14001417 0.356050082 0.619215107 0.179895816 0.266509558 0.279295225 0.261310401 0.115211807 0.168000344 0.337223457
1.00000 1.00000 1.00000 1.00000 1.00000 1.018630984 0.964947064 2.250415945 1.622197865 0.240529657 0.75614004 1.065079759 0.110193397 1.4293465 0.35333324 0.617817481 0.726931853 0.116486245 0.036677831 0.50126924 0.414700936 0.178570178 0.531452139 0.166382281
1.00000 1.00000 1.00000 1.00000 1.00000 1.671881765 0.968782834 1.073187004 1.086889349 0.647532031 1.014157582 0.863503533 0.305879186 0.448727403 0.904623856 0.432695002 0.5575506 0.137942313 0.072221711 0.327875553 0.242026012 0.043264802 0.135104168 0.440303113
1.00000 1.00000 1.00000 1.00000 1.00000 1.16622155 0.454444131 2.786745287 1.046113038 0.60357013 0.813153469 0.787503713 0.688216641 1.365452127 0.123994188 0.195339521 0.249708488 0.01322757 0.022744096 0.047756641 0.368206347 0.317460049 0.562057357 0.458774127
1.00000 1.00000 1.00000 1.00000 1.00000 1.191602132 1.095411389 2.870906184 1.130955312 0.515958107 0.643922558 1.032247542 0.535596183 1.286750463 0.07797037 0.259177567 0.267506677 0.046859394 0.025188071 0.005241839 0.021754414 0.171770967 0.697036065 0.271959618
1.00000 1.00000 1.00000 1.00000 1.00000 1.478634617 1.082002774 1.295205389 0.744956324 0.976263629 0.491187717 0.927208246 0.602176238 1.037514324 0.304721275 0.820965614 0.03030029 0.036503049 0.059154973 0.025303057 0.155294081 0.100600517 0.217519417 0.027493368
1.00000 1.00000 1.00000 1.00000 1.00000 0.040034608 0.995399409 1.646620387 1.341048155 0.010174614 0.54281779 2.340127222 0.436699042 0.214279635 0.340470548 0.263954537 0.09350449 0.046215969 0.068822052 0.016462872 0.36587133 0.054631234 0.085714515 0.254333541
1.00000 1.00000 1.00000 1.00000 1.00000 0.034458518 1.047816491 1.050709161 1.407539975 0.054046079 0.639614156 2.080996466 0.458455298 0.155528383 0.136908112 0.10261082 0.041691214 0.010531506 0.045811702 0.009880719 0.211364672 0.055185616 0.025314601 0.059633277
MATRIX:HSU MATRIX-saCas9-2017
1.00000 1.00000 1.00000 1.00000 1.00000 1.653312217 0.903020898 1.597721072 0.923530678 0.807022991 0.963232124 1.01625944 0.26584025 0.711884156 1.521066692 0.694185851 1.043403879 0.52549235 0.898073668 0.716358798 0.839891532 0.537606185 0.282072211 0.689780687
1.00000 1.00000 1.00000 1.00000 1.00000 1.514208159 1.159682815 1.658152541 0.992387533 0.024710323 0.552164002 1.8686911 0.773675684 0.927047872 0.729154118 0.48415093 0.482360483 0.705976348 1.022086513 0.018107063 0.349616508 0.181070971 0.136179168 0.270019825
1.00000 1.00000 1.00000 1.00000 1.00000 1.323358326 1.415685748 1.296737018 1.205954808 0.95239301 0.230357513 1.016250559 0.810035714 1.155940112 0.707528464 1.579071836 0.348976795 0.089927088 0.04966372 0.004546068 0.226670927 0.215301755 0.525028618 0.496472865
1.00000 1.00000 1.00000 1.00000 1.00000 1.536590735 1.27712259 1.268864823 1.219746615 1.064452173 0.779052105 1.24449999 0.988456707 1.53185795 0.718418143 1.73814687 0.416561912 0.128509362 0.071959174 0.054924206 0.226053995 0.311857733 0.134281319 0.060056479
1.00000 1.00000 1.00000 1.00000 1.00000 1.734698905 0.821526176 1.157934409 1.181552961 0.738011252 0.900417256 0.836770787 0.299685354 0.62100718 1.14001417 0.356050082 0.619215107 0.179895816 0.266509558 0.279295225 0.261310401 0.115211807 0.168000344 0.337223457
1.00000 1.00000 1.00000 1.00000 1.00000 1.018630984 0.964947064 2.250415945 1.622197865 0.240529657 0.75614004 1.065079759 0.110193397 1.4293465 0.35333324 0.617817481 0.726931853 0.116486245 0.036677831 0.50126924 0.414700936 0.178570178 0.531452139 0.166382281
1.00000 1.00000 1.00000 1.00000 1.00000 1.671881765 0.968782834 1.073187004 1.086889349 0.647532031 1.014157582 0.863503533 0.305879186 0.448727403 0.904623856 0.432695002 0.5575506 0.137942313 0.072221711 0.327875553 0.242026012 0.043264802 0.135104168 0.440303113
1.00000 1.00000 1.00000 1.00000 1.00000 1.16622155 0.454444131 2.786745287 1.046113038 0.60357013 0.813153469 0.787503713 0.688216641 1.365452127 0.123994188 0.195339521 0.249708488 0.01322757 0.022744096 0.047756641 0.368206347 0.317460049 0.562057357 0.458774127
1.00000 1.00000 1.00000 1.00000 1.00000 1.191602132 1.095411389 2.870906184 1.130955312 0.515958107 0.643922558 1.032247542 0.535596183 1.286750463 0.07797037 0.259177567 0.267506677 0.046859394 0.025188071 0.005241839 0.021754414 0.171770967 0.697036065 0.271959618
1.00000 1.00000 1.00000 1.00000 1.00000 1.478634617 1.082002774 1.295205389 0.744956324 0.976263629 0.491187717 0.927208246 0.602176238 1.037514324 0.304721275 0.820965614 0.03030029 0.036503049 0.059154973 0.025303057 0.155294081 0.100600517 0.217519417 0.027493368
1.00000 1.00000 1.00000 1.00000 1.00000 0.040034608 0.995399409 1.646620387 1.341048155 0.010174614 0.54281779 2.340127222 0.436699042 0.214279635 0.340470548 0.263954537 0.09350449 0.046215969 0.068822052 0.016462872 0.36587133 0.054631234 0.085714515 0.254333541
1.00000 1.00000 1.00000 1.00000 1.00000 0.034458518 1.047816491 1.050709161 1.407539975 0.054046079 0.639614156 2.080996466 0.458455298 0.155528383 0.136908112 0.10261082 0.041691214 0.010531506 0.045811702 0.009880719 0.211364672 0.055185616 0.025314601 0.059633277
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ENDFILE