From fffa1a4b49e331a250403f2c5b12209ba6ffcb19 Mon Sep 17 00:00:00 2001
From: Michael Williams de la Bastida
 <55510238+MIWdlB@users.noreply.github.com>
Date: Tue, 10 Dec 2024 10:21:42 +0000
Subject: [PATCH] Version bump (#135)

* bump version to 0.0.5

* unfix symmer dependence

* bump patch version number

* poetry update

* resolve merge conflicts

* remove emrge conflict tags from changlelog

* remove emrge conflict tags from pyproject
---
 CHANGELOG.md        |   4 +
 CITATION.cff        |   2 +-
 docs/source/conf.py |   2 +-
 poetry.lock         | 911 +++++++++++++++++++++++---------------------
 pyproject.toml      |   4 +-
 5 files changed, 482 insertions(+), 441 deletions(-)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index 11a9a99..6cf7c35 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -7,6 +7,10 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 ## [Unreleased]
 
+## [0.0.6]
+### Changed
+- `symmer dependence was pinned to 0.0.6, now ^0.0.6
+
 ## [0.0.5]
 ### Fixed
 
diff --git a/CITATION.cff b/CITATION.cff
index 570feb1..3e7c02a 100644
--- a/CITATION.cff
+++ b/CITATION.cff
@@ -8,6 +8,6 @@ authors:
     given-names: Alexis
     orcid: https://orcid.org/0000-0001-8953-1235
 title: "Nbed"
-version: 0.0.5
+version: 0.0.6
 date-released: 2022-03-07
 doi: 10.5281/zenodo.6323338
\ No newline at end of file
diff --git a/docs/source/conf.py b/docs/source/conf.py
index 07ee27e..aac5dca 100644
--- a/docs/source/conf.py
+++ b/docs/source/conf.py
@@ -28,7 +28,7 @@
 author = "Michael Williams de la Bastida, Alexis Ralli"
 
 # The full version, including alpha/beta/rc tags
-release = "0.0.5"
+release = "0.0.6"
 
 
 # -- General configuration ---------------------------------------------------
diff --git a/poetry.lock b/poetry.lock
index 4426981..43f8808 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,4 +1,4 @@
-# This file is automatically @generated by Poetry 1.8.2 and should not be changed by hand.
+# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand.
 
 [[package]]
 name = "aiosignal"
@@ -38,13 +38,13 @@ files = [
 
 [[package]]
 name = "anyio"
-version = "4.5.0"
+version = "4.5.2"
 description = "High level compatibility layer for multiple asynchronous event loop implementations"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "anyio-4.5.0-py3-none-any.whl", hash = "sha256:fdeb095b7cc5a5563175eedd926ec4ae55413bb4be5770c424af0ba46ccb4a78"},
-    {file = "anyio-4.5.0.tar.gz", hash = "sha256:c5a275fe5ca0afd788001f58fca1e69e29ce706d746e317d660e21f70c530ef9"},
+    {file = "anyio-4.5.2-py3-none-any.whl", hash = "sha256:c011ee36bc1e8ba40e5a81cb9df91925c218fe9b778554e0b56a21e1b5d4716f"},
+    {file = "anyio-4.5.2.tar.gz", hash = "sha256:23009af4ed04ce05991845451e11ef02fc7c5ed29179ac9a420e5ad0ac7ddc5b"},
 ]
 
 [package.dependencies]
@@ -55,7 +55,7 @@ typing-extensions = {version = ">=4.1", markers = "python_version < \"3.11\""}
 
 [package.extras]
 doc = ["Sphinx (>=7.4,<8.0)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx-rtd-theme"]
-test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "uvloop (>=0.21.0b1)"]
+test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "truststore (>=0.9.1)", "uvloop (>=0.21.0b1)"]
 trio = ["trio (>=0.26.1)"]
 
 [[package]]
@@ -158,21 +158,18 @@ test = ["dateparser (==1.*)", "pre-commit", "pytest", "pytest-cov", "pytest-mock
 
 [[package]]
 name = "asttokens"
-version = "2.4.1"
+version = "3.0.0"
 description = "Annotate AST trees with source code positions"
 optional = false
-python-versions = "*"
+python-versions = ">=3.8"
 files = [
-    {file = "asttokens-2.4.1-py2.py3-none-any.whl", hash = "sha256:051ed49c3dcae8913ea7cd08e46a606dba30b79993209636c4875bc1d637bc24"},
-    {file = "asttokens-2.4.1.tar.gz", hash = "sha256:b03869718ba9a6eb027e134bfdf69f38a236d681c83c160d510768af11254ba0"},
+    {file = "asttokens-3.0.0-py3-none-any.whl", hash = "sha256:e3078351a059199dd5138cb1c706e6430c05eff2ff136af5eb4790f9d28932e2"},
+    {file = "asttokens-3.0.0.tar.gz", hash = "sha256:0dcd8baa8d62b0c1d118b399b2ddba3c4aff271d0d7a9e0d4c1681c79035bbc7"},
 ]
 
-[package.dependencies]
-six = ">=1.12.0"
-
 [package.extras]
-astroid = ["astroid (>=1,<2)", "astroid (>=2,<4)"]
-test = ["astroid (>=1,<2)", "astroid (>=2,<4)", "pytest"]
+astroid = ["astroid (>=2,<4)"]
+test = ["astroid (>=2,<4)", "pytest", "pytest-cov", "pytest-xdist"]
 
 [[package]]
 name = "async-lru"
@@ -419,13 +416,13 @@ virtualenv = ["virtualenv (>=20.0.35)"]
 
 [[package]]
 name = "cachecontrol"
-version = "0.14.0"
+version = "0.14.1"
 description = "httplib2 caching for requests"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "cachecontrol-0.14.0-py3-none-any.whl", hash = "sha256:f5bf3f0620c38db2e5122c0726bdebb0d16869de966ea6a2befe92470b740ea0"},
-    {file = "cachecontrol-0.14.0.tar.gz", hash = "sha256:7db1195b41c81f8274a7bbd97c956f44e8348265a1bc7641c37dfebc39f0c938"},
+    {file = "cachecontrol-0.14.1-py3-none-any.whl", hash = "sha256:65e3abd62b06382ce3894df60dde9e0deb92aeb734724f68fa4f3b91e97206b9"},
+    {file = "cachecontrol-0.14.1.tar.gz", hash = "sha256:06ef916a1e4eb7dba9948cdfc9c76e749db2e02104a9a1277e8b642591a0f717"},
 ]
 
 [package.dependencies]
@@ -434,7 +431,7 @@ msgpack = ">=0.5.2,<2.0.0"
 requests = ">=2.16.0"
 
 [package.extras]
-dev = ["CacheControl[filecache,redis]", "black", "build", "cherrypy", "furo", "mypy", "pytest", "pytest-cov", "sphinx", "sphinx-copybutton", "tox", "types-redis", "types-requests"]
+dev = ["CacheControl[filecache,redis]", "build", "cherrypy", "codespell[tomli]", "furo", "mypy", "pytest", "pytest-cov", "ruff", "sphinx", "sphinx-copybutton", "tox", "types-redis", "types-requests"]
 filecache = ["filelock (>=3.8.0)"]
 redis = ["redis (>=2.10.5)"]
 
@@ -911,38 +908,38 @@ files = [
 
 [[package]]
 name = "cryptography"
-version = "43.0.1"
+version = "43.0.3"
 description = "cryptography is a package which provides cryptographic recipes and primitives to Python developers."
 optional = false
 python-versions = ">=3.7"
 files = [
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+    {file = "cryptography-43.0.3.tar.gz", hash = "sha256:315b9001266a492a6ff443b61238f956b214dbec9910a081ba5b6646a055a805"},
 ]
 
 [package.dependencies]
@@ -955,7 +952,7 @@ nox = ["nox"]
 pep8test = ["check-sdist", "click", "mypy", "ruff"]
 sdist = ["build"]
 ssh = ["bcrypt (>=3.1.5)"]
-test = ["certifi", "cryptography-vectors (==43.0.1)", "pretend", "pytest (>=6.2.0)", "pytest-benchmark", "pytest-cov", "pytest-xdist"]
+test = ["certifi", "cryptography-vectors (==43.0.3)", "pretend", "pytest (>=6.2.0)", "pytest-benchmark", "pytest-cov", "pytest-xdist"]
 test-randomorder = ["pytest-randomly"]
 
 [[package]]
@@ -1136,33 +1133,37 @@ cython = ["cython"]
 
 [[package]]
 name = "debugpy"
-version = "1.8.6"
+version = "1.8.9"
 description = "An implementation of the Debug Adapter Protocol for Python"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "debugpy-1.8.6-cp310-cp310-macosx_14_0_x86_64.whl", hash = "sha256:30f467c5345d9dfdcc0afdb10e018e47f092e383447500f125b4e013236bf14b"},
-    {file = "debugpy-1.8.6-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:5d73d8c52614432f4215d0fe79a7e595d0dd162b5c15233762565be2f014803b"},
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 [package.extras]
@@ -1684,70 +1687,70 @@ test = ["objgraph", "psutil"]
 
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 [package.extras]
-protobuf = ["grpcio-tools (>=1.66.2)"]
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 [[package]]
 name = "h11"
@@ -1795,13 +1798,13 @@ numpy = ">=1.17.3"
 
 [[package]]
 name = "httpcore"
-version = "1.0.6"
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 description = "A minimal low-level HTTP client."
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 ]
 
 [package.dependencies]
@@ -1816,13 +1819,13 @@ trio = ["trio (>=0.22.0,<1.0)"]
 
 [[package]]
 name = "httpx"
-version = "0.27.2"
+version = "0.28.1"
 description = "The next generation HTTP client."
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 python-versions = ">=3.8"
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 ]
 
 [package.dependencies]
@@ -1830,7 +1833,6 @@ anyio = "*"
 certifi = "*"
 httpcore = "==1.*"
 idna = "*"
-sniffio = "*"
 
 [package.extras]
 brotli = ["brotli", "brotlicffi"]
@@ -2072,22 +2074,22 @@ testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-ena
 
 [[package]]
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 description = "An autocompletion tool for Python that can be used for text editors."
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 python-versions = ">=3.6"
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 ]
 
 [package.dependencies]
-parso = ">=0.8.3,<0.9.0"
+parso = ">=0.8.4,<0.9.0"
 
 [package.extras]
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-testing = ["Django", "attrs", "colorama", "docopt", "pytest (<7.0.0)"]
+testing = ["Django", "attrs", "colorama", "docopt", "pytest (<9.0.0)"]
 
 [[package]]
 name = "jeepney"
@@ -2137,15 +2139,18 @@ ansicon = {version = "*", markers = "platform_system == \"Windows\""}
 
 [[package]]
 name = "json5"
-version = "0.9.25"
+version = "0.10.0"
 description = "A Python implementation of the JSON5 data format."
 optional = false
-python-versions = ">=3.8"
+python-versions = ">=3.8.0"
 files = [
-    {file = "json5-0.9.25-py3-none-any.whl", hash = "sha256:34ed7d834b1341a86987ed52f3f76cd8ee184394906b6e22a1e0deb9ab294e8f"},
-    {file = "json5-0.9.25.tar.gz", hash = "sha256:548e41b9be043f9426776f05df8635a00fe06104ea51ed24b67f908856e151ae"},
+    {file = "json5-0.10.0-py3-none-any.whl", hash = "sha256:19b23410220a7271e8377f81ba8aacba2fdd56947fbb137ee5977cbe1f5e8dfa"},
+    {file = "json5-0.10.0.tar.gz", hash = "sha256:e66941c8f0a02026943c52c2eb34ebeb2a6f819a0be05920a6f5243cd30fd559"},
 ]
 
+[package.extras]
+dev = ["build (==1.2.2.post1)", "coverage (==7.5.3)", "mypy (==1.13.0)", "pip (==24.3.1)", "pylint (==3.2.3)", "ruff (==0.7.3)", "twine (==5.1.1)", "uv (==0.5.1)"]
+
 [[package]]
 name = "jsonpointer"
 version = "3.0.0"
@@ -2413,18 +2418,18 @@ test = ["jupyter-server (>=2.0.0)", "pytest (>=7.0)", "pytest-jupyter[server] (>
 
 [[package]]
 name = "jupyterlab"
-version = "4.2.5"
+version = "4.3.2"
 description = "JupyterLab computational environment"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "jupyterlab-4.2.5-py3-none-any.whl", hash = "sha256:73b6e0775d41a9fee7ee756c80f58a6bed4040869ccc21411dc559818874d321"},
-    {file = "jupyterlab-4.2.5.tar.gz", hash = "sha256:ae7f3a1b8cb88b4f55009ce79fa7c06f99d70cd63601ee4aa91815d054f46f75"},
+    {file = "jupyterlab-4.3.2-py3-none-any.whl", hash = "sha256:e87100cbab8b886ff7a4f325c856100ba6fdfe916162a85409daf0e707e19d1d"},
+    {file = "jupyterlab-4.3.2.tar.gz", hash = "sha256:3c0a6882dbddcc0a7bfdd5e2236f351b2b263e48780236e6996c2aca13ac5b22"},
 ]
 
 [package.dependencies]
 async-lru = ">=1.0.0"
-httpx = ">=0.25.0"
+httpx = ">=0.28.0,<0.29.0"
 importlib-metadata = {version = ">=4.8.3", markers = "python_version < \"3.10\""}
 importlib-resources = {version = ">=1.4", markers = "python_version < \"3.9\""}
 ipykernel = ">=6.5.0"
@@ -2435,15 +2440,15 @@ jupyter-server = ">=2.4.0,<3"
 jupyterlab-server = ">=2.27.1,<3"
 notebook-shim = ">=0.2"
 packaging = "*"
-setuptools = ">=40.1.0"
+setuptools = ">=40.8.0"
 tomli = {version = ">=1.2.2", markers = "python_version < \"3.11\""}
 tornado = ">=6.2.0"
 traitlets = "*"
 
 [package.extras]
-dev = ["build", "bump2version", "coverage", "hatch", "pre-commit", "pytest-cov", "ruff (==0.3.5)"]
-docs = ["jsx-lexer", "myst-parser", "pydata-sphinx-theme (>=0.13.0)", "pytest", "pytest-check-links", "pytest-jupyter", "sphinx (>=1.8,<7.3.0)", "sphinx-copybutton"]
-docs-screenshots = ["altair (==5.3.0)", "ipython (==8.16.1)", "ipywidgets (==8.1.2)", "jupyterlab-geojson (==3.4.0)", "jupyterlab-language-pack-zh-cn (==4.1.post2)", "matplotlib (==3.8.3)", "nbconvert (>=7.0.0)", "pandas (==2.2.1)", "scipy (==1.12.0)", "vega-datasets (==0.9.0)"]
+dev = ["build", "bump2version", "coverage", "hatch", "pre-commit", "pytest-cov", "ruff (==0.6.9)"]
+docs = ["jsx-lexer", "myst-parser", "pydata-sphinx-theme (>=0.13.0)", "pytest", "pytest-check-links", "pytest-jupyter", "sphinx (>=1.8,<8.1.0)", "sphinx-copybutton"]
+docs-screenshots = ["altair (==5.4.1)", "ipython (==8.16.1)", "ipywidgets (==8.1.5)", "jupyterlab-geojson (==3.4.0)", "jupyterlab-language-pack-zh-cn (==4.2.post3)", "matplotlib (==3.9.2)", "nbconvert (>=7.0.0)", "pandas (==2.2.3)", "scipy (==1.14.1)", "vega-datasets (==0.9.0)"]
 test = ["coverage", "pytest (>=7.0)", "pytest-check-links (>=0.7)", "pytest-console-scripts", "pytest-cov", "pytest-jupyter (>=0.5.3)", "pytest-timeout", "pytest-tornasync", "requests", "requests-cache", "virtualenv"]
 upgrade-extension = ["copier (>=9,<10)", "jinja2-time (<0.3)", "pydantic (<3.0)", "pyyaml-include (<3.0)", "tomli-w (<2.0)"]
 
@@ -3256,18 +3261,18 @@ test = ["codecov (>=2.1)", "pytest (>=7.2)", "pytest-cov (>=4.0)"]
 
 [[package]]
 name = "notebook"
-version = "7.2.2"
+version = "7.3.1"
 description = "Jupyter Notebook - A web-based notebook environment for interactive computing"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "notebook-7.2.2-py3-none-any.whl", hash = "sha256:c89264081f671bc02eec0ed470a627ed791b9156cad9285226b31611d3e9fe1c"},
-    {file = "notebook-7.2.2.tar.gz", hash = "sha256:2ef07d4220421623ad3fe88118d687bc0450055570cdd160814a59cf3a1c516e"},
+    {file = "notebook-7.3.1-py3-none-any.whl", hash = "sha256:212e1486b2230fe22279043f33c7db5cf9a01d29feb063a85cb139747b7c9483"},
+    {file = "notebook-7.3.1.tar.gz", hash = "sha256:84381c2a82d867517fd25b86e986dae1fe113a70b98f03edff9b94e499fec8fa"},
 ]
 
 [package.dependencies]
 jupyter-server = ">=2.4.0,<3"
-jupyterlab = ">=4.2.0,<4.3"
+jupyterlab = ">=4.3.2,<4.4"
 jupyterlab-server = ">=2.27.1,<3"
 notebook-shim = ">=0.2,<0.3"
 tornado = ">=6.2.0"
@@ -3415,13 +3420,13 @@ files = [
 
 [[package]]
 name = "packaging"
-version = "24.1"
+version = "24.2"
 description = "Core utilities for Python packages"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "packaging-24.1-py3-none-any.whl", hash = "sha256:5b8f2217dbdbd2f7f384c41c628544e6d52f2d0f53c6d0c3ea61aa5d1d7ff124"},
-    {file = "packaging-24.1.tar.gz", hash = "sha256:026ed72c8ed3fcce5bf8950572258698927fd1dbda10a5e981cdf0ac37f4f002"},
+    {file = "packaging-24.2-py3-none-any.whl", hash = "sha256:09abb1bccd265c01f4a3aa3f7a7db064b36514d2cba19a2f694fe6150451a759"},
+    {file = "packaging-24.2.tar.gz", hash = "sha256:c228a6dc5e932d346bc5739379109d49e8853dd8223571c7c5b55260edc0b97f"},
 ]
 
 [[package]]
@@ -3746,13 +3751,13 @@ xmp = ["defusedxml"]
 
 [[package]]
 name = "pkginfo"
-version = "1.11.1"
+version = "1.12.0"
 description = "Query metadata from sdists / bdists / installed packages."
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "pkginfo-1.11.1-py3-none-any.whl", hash = "sha256:bfa76a714fdfc18a045fcd684dbfc3816b603d9d075febef17cb6582bea29573"},
-    {file = "pkginfo-1.11.1.tar.gz", hash = "sha256:2e0dca1cf4c8e39644eed32408ea9966ee15e0d324c62ba899a393b3c6b467aa"},
+    {file = "pkginfo-1.12.0-py3-none-any.whl", hash = "sha256:dcd589c9be4da8973eceffa247733c144812759aa67eaf4bbf97016a02f39088"},
+    {file = "pkginfo-1.12.0.tar.gz", hash = "sha256:8ad91a0445a036782b9366ef8b8c2c50291f83a553478ba8580c73d3215700cf"},
 ]
 
 [package.extras]
@@ -3834,13 +3839,13 @@ files = [
 
 [[package]]
 name = "poetry"
-version = "1.8.3"
+version = "1.8.5"
 description = "Python dependency management and packaging made easy."
 optional = false
 python-versions = "<4.0,>=3.8"
 files = [
-    {file = "poetry-1.8.3-py3-none-any.whl", hash = "sha256:88191c69b08d06f9db671b793d68f40048e8904c0718404b63dcc2b5aec62d13"},
-    {file = "poetry-1.8.3.tar.gz", hash = "sha256:67f4eb68288eab41e841cc71a00d26cf6bdda9533022d0189a145a34d0a35f48"},
+    {file = "poetry-1.8.5-py3-none-any.whl", hash = "sha256:5505fba69bf2a792b5d7402d21839c853644337392b745109b86a23010cce5f3"},
+    {file = "poetry-1.8.5.tar.gz", hash = "sha256:eb2c88d224f58f36df8f7b36d6c380c07d1001bca28bde620f68fc086e881b70"},
 ]
 
 [package.dependencies]
@@ -3855,9 +3860,9 @@ installer = ">=0.7.0,<0.8.0"
 keyring = ">=24.0.0,<25.0.0"
 packaging = ">=23.1"
 pexpect = ">=4.7.0,<5.0.0"
-pkginfo = ">=1.10,<2.0"
+pkginfo = ">=1.12,<2.0"
 platformdirs = ">=3.0.0,<5"
-poetry-core = "1.9.0"
+poetry-core = "1.9.1"
 poetry-plugin-export = ">=1.6.0,<2.0.0"
 pyproject-hooks = ">=1.0.0,<2.0.0"
 requests = ">=2.26,<3.0"
@@ -3866,18 +3871,18 @@ shellingham = ">=1.5,<2.0"
 tomli = {version = ">=2.0.1,<3.0.0", markers = "python_version < \"3.11\""}
 tomlkit = ">=0.11.4,<1.0.0"
 trove-classifiers = ">=2022.5.19"
-virtualenv = ">=20.23.0,<21.0.0"
+virtualenv = ">=20.26.6,<21.0.0"
 xattr = {version = ">=1.0.0,<2.0.0", markers = "sys_platform == \"darwin\""}
 
 [[package]]
 name = "poetry-core"
-version = "1.9.0"
+version = "1.9.1"
 description = "Poetry PEP 517 Build Backend"
 optional = false
-python-versions = ">=3.8,<4.0"
+python-versions = "<4.0,>=3.8"
 files = [
-    {file = "poetry_core-1.9.0-py3-none-any.whl", hash = "sha256:4e0c9c6ad8cf89956f03b308736d84ea6ddb44089d16f2adc94050108ec1f5a1"},
-    {file = "poetry_core-1.9.0.tar.gz", hash = "sha256:fa7a4001eae8aa572ee84f35feb510b321bd652e5cf9293249d62853e1f935a2"},
+    {file = "poetry_core-1.9.1-py3-none-any.whl", hash = "sha256:6f45dd3598e0de8d9b0367360253d4c5d4d0110c8f5c71120a14f0e0f116c1a0"},
+    {file = "poetry_core-1.9.1.tar.gz", hash = "sha256:7a2d49214bf58b4f17f99d6891d947a9836c9899a67a5069f52d7b67217f61b8"},
 ]
 
 [[package]]
@@ -3897,13 +3902,13 @@ poetry-core = ">=1.7.0,<3.0.0"
 
 [[package]]
 name = "prometheus-client"
-version = "0.21.0"
+version = "0.21.1"
 description = "Python client for the Prometheus monitoring system."
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "prometheus_client-0.21.0-py3-none-any.whl", hash = "sha256:4fa6b4dd0ac16d58bb587c04b1caae65b8c5043e85f778f42f5f632f6af2e166"},
-    {file = "prometheus_client-0.21.0.tar.gz", hash = "sha256:96c83c606b71ff2b0a433c98889d275f51ffec6c5e267de37c7a2b5c9aa9233e"},
+    {file = "prometheus_client-0.21.1-py3-none-any.whl", hash = "sha256:594b45c410d6f4f8888940fe80b5cc2521b305a1fafe1c58609ef715a001f301"},
+    {file = "prometheus_client-0.21.1.tar.gz", hash = "sha256:252505a722ac04b0456be05c05f75f45d760c2911ffc45f2a06bcaed9f3ae3fb"},
 ]
 
 [package.extras]
@@ -3925,52 +3930,53 @@ wcwidth = "*"
 
 [[package]]
 name = "protobuf"
-version = "5.29.0"
+version = "5.29.1"
 description = ""
 optional = false
 python-versions = ">=3.8"
 files = [
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 ]
 
 [[package]]
 name = "psutil"
-version = "6.0.0"
+version = "6.1.0"
 description = "Cross-platform lib for process and system monitoring in Python."
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7"
 files = [
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 [[package]]
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 ]
 
 [[package]]
@@ -5042,23 +5048,23 @@ win32 = ["pywin32"]
 
 [[package]]
 name = "setuptools"
-version = "75.1.0"
+version = "75.3.0"
 description = "Easily download, build, install, upgrade, and uninstall Python packages"
 optional = false
 python-versions = ">=3.8"
 files = [
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+core = ["importlib-metadata (>=6)", "importlib-resources (>=5.10.2)", "jaraco.collections", "jaraco.functools", "jaraco.text (>=3.7)", "more-itertools", "more-itertools (>=8.8)", "packaging", "packaging (>=24)", "platformdirs (>=4.2.2)", "tomli (>=2.0.1)", "wheel (>=0.43.0)"]
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-type = ["importlib-metadata (>=7.0.2)", "jaraco.develop (>=7.21)", "mypy (==1.11.*)", "pytest-mypy"]
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+type = ["importlib-metadata (>=7.0.2)", "jaraco.develop (>=7.21)", "mypy (==1.12.*)", "pytest-mypy"]
 
 [[package]]
 name = "shellingham"
@@ -5073,13 +5079,13 @@ files = [
 
 [[package]]
 name = "six"
-version = "1.16.0"
+version = "1.17.0"
 description = "Python 2 and 3 compatibility utilities"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*"
+python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7"
 files = [
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 ]
 
 [[package]]
@@ -5588,13 +5594,13 @@ typing = ["mypy (>=1.6,<2.0)", "traitlets (>=5.11.1)"]
 
 [[package]]
 name = "tinycss2"
-version = "1.3.0"
+version = "1.4.0"
 description = "A tiny CSS parser"
 optional = false
 python-versions = ">=3.8"
 files = [
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 ]
 
 [package.dependencies]
@@ -5617,13 +5623,43 @@ files = [
 
 [[package]]
 name = "tomli"
-version = "2.0.2"
+version = "2.2.1"
 description = "A lil' TOML parser"
 optional = false
 python-versions = ">=3.8"
 files = [
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 ]
 
 [[package]]
@@ -5650,40 +5686,41 @@ files = [
 
 [[package]]
 name = "tornado"
-version = "6.4.1"
+version = "6.4.2"
 description = "Tornado is a Python web framework and asynchronous networking library, originally developed at FriendFeed."
 optional = false
 python-versions = ">=3.8"
 files = [
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 [[package]]
 name = "tqdm"
-version = "4.66.5"
+version = "4.67.1"
 description = "Fast, Extensible Progress Meter"
 optional = false
 python-versions = ">=3.7"
 files = [
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 ]
 
 [package.dependencies]
 colorama = {version = "*", markers = "platform_system == \"Windows\""}
 
 [package.extras]
-dev = ["pytest (>=6)", "pytest-cov", "pytest-timeout", "pytest-xdist"]
+dev = ["nbval", "pytest (>=6)", "pytest-asyncio (>=0.24)", "pytest-cov", "pytest-timeout"]
+discord = ["requests"]
 notebook = ["ipywidgets (>=6)"]
 slack = ["slack-sdk"]
 telegram = ["requests"]
@@ -5705,24 +5742,24 @@ test = ["argcomplete (>=3.0.3)", "mypy (>=1.7.0)", "pre-commit", "pytest (>=7.0,
 
 [[package]]
 name = "trove-classifiers"
-version = "2024.9.12"
+version = "2024.10.21.16"
 description = "Canonical source for classifiers on PyPI (pypi.org)."
 optional = false
 python-versions = "*"
 files = [
-    {file = "trove_classifiers-2024.9.12-py3-none-any.whl", hash = "sha256:f88a27a892891c87c5f8bbdf110710ae9e0a4725ea8e0fb45f1bcadf088a491f"},
-    {file = "trove_classifiers-2024.9.12.tar.gz", hash = "sha256:4b46b3e134a4d01999ac5bc6e528afcc10cc48f0f724f185f267e276005768f4"},
+    {file = "trove_classifiers-2024.10.21.16-py3-none-any.whl", hash = "sha256:0fb11f1e995a757807a8ef1c03829fbd4998d817319abcef1f33165750f103be"},
+    {file = "trove_classifiers-2024.10.21.16.tar.gz", hash = "sha256:17cbd055d67d5e9d9de63293a8732943fabc21574e4c7b74edf112b4928cf5f3"},
 ]
 
 [[package]]
 name = "types-python-dateutil"
-version = "2.9.0.20241003"
+version = "2.9.0.20241206"
 description = "Typing stubs for python-dateutil"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "types-python-dateutil-2.9.0.20241003.tar.gz", hash = "sha256:58cb85449b2a56d6684e41aeefb4c4280631246a0da1a719bdbe6f3fb0317446"},
-    {file = "types_python_dateutil-2.9.0.20241003-py3-none-any.whl", hash = "sha256:250e1d8e80e7bbc3a6c99b907762711d1a1cdd00e978ad39cb5940f6f0a87f3d"},
+    {file = "types_python_dateutil-2.9.0.20241206-py3-none-any.whl", hash = "sha256:e248a4bc70a486d3e3ec84d0dc30eec3a5f979d6e7ee4123ae043eedbb987f53"},
+    {file = "types_python_dateutil-2.9.0.20241206.tar.gz", hash = "sha256:18f493414c26ffba692a72369fea7a154c502646301ebfe3d56a04b3767284cb"},
 ]
 
 [[package]]
@@ -5790,13 +5827,13 @@ socks = ["PySocks (>=1.5.6,!=1.5.7,<2.0)"]
 
 [[package]]
 name = "virtualenv"
-version = "20.26.6"
+version = "20.28.0"
 description = "Virtual Python Environment builder"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "virtualenv-20.26.6-py3-none-any.whl", hash = "sha256:7345cc5b25405607a624d8418154577459c3e0277f5466dd79c49d5e492995f2"},
-    {file = "virtualenv-20.26.6.tar.gz", hash = "sha256:280aede09a2a5c317e409a00102e7077c6432c5a38f0ef938e643805a7ad2c48"},
+    {file = "virtualenv-20.28.0-py3-none-any.whl", hash = "sha256:23eae1b4516ecd610481eda647f3a7c09aea295055337331bb4e6892ecce47b0"},
+    {file = "virtualenv-20.28.0.tar.gz", hash = "sha256:2c9c3262bb8e7b87ea801d715fae4495e6032450c71d2309be9550e7364049aa"},
 ]
 
 [package.dependencies]
@@ -5967,4 +6004,4 @@ type = ["pytest-mypy"]
 [metadata]
 lock-version = "2.0"
 python-versions = ">=3.8, <3.11"
-content-hash = "798daaa6f7d8eea0f20e35801c28ef75bdc324a8720cbdd65016b04d7fbab261"
+content-hash = "4819fee1a17f15b6ad2a3a005ebf188f92bf6f7ba251f0b6187764b705699ce9"
diff --git a/pyproject.toml b/pyproject.toml
index 6c30dab..f4ad9d1 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "nbed"
-version = "0.0.5"
+version = "0.0.6"
 description = ""
 authors = [
     "Michael Williams de la Bastida <michael.williams.20@ucl.ac.uk>", 
@@ -22,7 +22,7 @@ cached-property = "^1.5.2"
 py3Dmol = "^1.7.0"
 jupyter = "^1.0.0"
 h5py = "^3.7"
-symmer = "0.0.6"
+symmer = "^0.0.6"
 pyscf = "^2.3.0"
 grpcio = "^1.59.0"