-
Notifications
You must be signed in to change notification settings - Fork 3
/
torchTrain.py
661 lines (563 loc) · 26.9 KB
/
torchTrain.py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
import torch
import torch.nn as nn
import torch.nn.functional as F
import torch.optim as optim
import time
from torchvision import models, utils
from torchvision import datasets
from torchvision import transforms
from collections import defaultdict
from tqdm import tqdm
import seaborn as sns
import numpy as np
import pandas as pd
import matplotlib.pyplot as plt
from torch.utils.data import DataLoader, SubsetRandomSampler
import os
from sklearn.metrics import classification_report, confusion_matrix
# from torch.utils.tensorboard import SummaryWriter
from torch.cuda.amp import autocast, GradScaler
import warnings
import random
import cv2
from PIL import Image
warnings.filterwarnings('ignore')
if torch.cuda.is_available():
DEVICE = torch.device('cuda:0')
torch.backends.cudnn.benchmark = True
torch.cuda.manual_seed(42)
torch.cuda.empty_cache()
# memory_summary = torch.cuda.memory_summary(device='cuda', abbreviated=False)
# print(memory_summary)
else:
DEVICE = torch.device('cpu')
torch.manual_seed(42)
np.random.seed(100)
def calculate_accuracy(y_pred, y_test):
y_pred_softmax = torch.log_softmax(y_pred, dim=1)
_, y_pred_tags = torch.max(y_pred_softmax, dim=1)
correct_pred = (y_pred_tags == y_test).float()
acc = correct_pred.sum() / len(correct_pred)
acc = torch.round(acc * 100)
return acc
class MetricMonitor:
def __init__(self, float_precision=3):
self.float_precision = float_precision
self.reset()
def reset(self):
self.metrics = defaultdict(lambda: {'val': 0, 'count': 0, 'avg': 0})
def update(self, metric_name, val):
metric = self.metrics[metric_name]
metric['val'] += val
metric['count'] += 1
metric['avg'] = metric['val'] / metric['count']
def __str__(self):
return ' | '.join(
[
'{metric_name}: {avg:.{float_precision}f}'.format(
metric_name=metric_name, avg=metric['avg'], float_precision=self.float_precision
)
for (metric_name, metric) in self.metrics.items()
]
)
def train(train_loader, net, criterion, optimizer, epoch, scaler, writer=None):
metric_monitor = MetricMonitor()
net.train()
stream = tqdm(train_loader)
train_accuracy = []
train_loss = []
for batch_index, (images, labels) in enumerate(stream, start=1):
images = images.to(DEVICE, non_blocking=True) # tensor size [batch_size, 3, img_w, img_h]
labels = labels.to(DEVICE, non_blocking=True) # tensor size [batch_size, ]
# dataset visualization using tensorboard
# img_grid = utils.make_grid(images)
# writer.add_image('train_images', img_grid)
# writer.add_graph(net, images)
optimizer.zero_grad()
with autocast():
outputs = net(images) # tensor size [batch_size, len(classes)]
loss = criterion(outputs, labels) # calculate loss
accuracy = calculate_accuracy(outputs, labels)
metric_monitor.update('Loss', loss.item())
metric_monitor.update('Accuracy', accuracy.item())
train_accuracy.append(accuracy.item())
train_loss.append(loss.item())
scaler.scale(loss).backward()
scaler.step(optimizer)
scaler.update()
stream.set_description(
'Epoch: {epoch}. Train. {metric_monitor}'.format(epoch=epoch, metric_monitor=metric_monitor)
)
return train_loss, train_accuracy, scaler
def validate(val_loader, net, criterion, epoch):
metric_monitor = MetricMonitor()
net.eval()
stream = tqdm(val_loader)
val_accuracy = []
val_loss = []
with torch.no_grad():
for i, (images, labels) in enumerate(stream, start=1):
images = images.to(DEVICE, non_blocking=True)
labels = labels.to(DEVICE, non_blocking=True)
outputs = net(images)
loss = criterion(outputs, labels)
accuracy = calculate_accuracy(outputs, labels)
metric_monitor.update('Loss', loss.item())
metric_monitor.update('Accuracy', accuracy.item())
val_accuracy.append(accuracy.item())
val_loss.append(loss.item())
stream.set_description(
'Epoch: {epoch}. Validation. {metric_monitor}'.format(epoch=epoch, metric_monitor=metric_monitor)
)
return val_loss, val_accuracy
def test(test_loader, net, idx2class):
metric_monitor = MetricMonitor()
net.eval()
stream = tqdm(test_loader)
y_pred_list = []
y_true_list = []
test_accuracy = []
with torch.no_grad():
for x_batch, y_batch in stream:
x_batch = x_batch.to(DEVICE, non_blocking=True)
y_batch = y_batch.to(DEVICE, non_blocking=True)
y_test_pred = net(x_batch)
_, y_pred_tag = torch.max(y_test_pred, dim=1)
y_pred_list.append(y_pred_tag.cpu().numpy().tolist()) # list shape: [_, batch_size]
y_true_list.append(y_batch.cpu().numpy().tolist())
accuracy = calculate_accuracy(y_test_pred, y_batch)
metric_monitor.update('Accuracy', accuracy.item())
test_accuracy.append(accuracy.item())
stream.set_description(
'Test. {metric_monitor}'.format(metric_monitor=metric_monitor)
)
y_pred_array = []
y_true_array = []
for i in range(len(y_pred_list)):
y_pred_array += y_pred_list[i] # 1-dimension
y_true_array += y_true_list[i]
# print('y_pred_list: ', y_pred_array)
# print('y_true_list: ', y_true_array)
target_names = [v for k, v in idx2class.items()]
print('classification_report')
print(classification_report(y_true_array, y_pred_array, target_names=target_names))
print('confusion_matrix')
print(confusion_matrix(y_true_array, y_pred_array))
# confusion_matrix_df = pd.DataFrame(confusion_matrix(y_true_array, y_pred_array)).rename(columns=idx2class, index=idx2class)
# fig, ax = plt.subplots(figsize=(20, 18))
# sns.heatmap(confusion_matrix_df, annot=True, ax=ax)
# plt.savefig('Heatmap.eps', dpi=600, format='eps')
# plt.show()
return test_accuracy
def get_class_distribution(dataset, idx2class):
count_dict = {k: 0 for k, v in dataset.class_to_idx.items()}
for _, label_id in dataset:
label = idx2class[label_id]
count_dict[label] += 1
print('count_dict: ', count_dict)
return count_dict
def get_class_distribution_loaders(dataloader_obj, dataset_obj, idx2class):
count_dict = {k: 0 for k, v in dataset_obj.class_to_idx.items()}
if dataloader_obj.batch_size == 1:
for _, label_id in dataloader_obj:
y_idx = label_id.item()
y_lbl = idx2class[y_idx]
count_dict[str(y_lbl)] += 1
else:
for _, label_id in dataloader_obj:
for idx in label_id:
y_idx = idx.item()
y_lbl = idx2class[y_idx]
count_dict[str(y_lbl)] += 1
return count_dict
def plot_from_dict(dict_obj, plot_title, legend_switch, **kwargs):
data = pd.DataFrame.from_dict([dict_obj]).melt().rename(columns={'variable': 'stu_name', 'value': 'img_num'})
if legend_switch:
plot = sns.barplot(data=data, x='stu_name', y='img_num', hue='stu_name', dodge=False, **kwargs)
plt.legend(bbox_to_anchor=(1.01, 1), loc='upper left', borderaxespad=0)
else:
plot = sns.barplot(data=data, x='stu_name', y='img_num', dodge=False, **kwargs)
plot.set_xticklabels(plot.get_xticklabels(), rotation=45)
plot.set_title(plot_title, fontsize=20)
plot.set_ylabel('image number', fontsize=20)
return plot
def loadtraindata(path):
filename = path.split('/')[-1].split('_')[-1]
print('path:', path)
print('filename:', filename)
image_transforms = {
'train': transforms.Compose([
transforms.RandomHorizontalFlip(p=0.5),
transforms.RandomRotation(degrees=(-90, 90)),
transforms.RandomVerticalFlip(p=0.5),
transforms.Resize((224, 224)),
transforms.ToTensor(),
transforms.Normalize((0.5, 0.5, 0.5), (0.5, 0.5, 0.5))
]),
'test': transforms.Compose([
transforms.Resize((224, 224)),
transforms.ToTensor(),
transforms.Normalize((0.5, 0.5, 0.5), (0.5, 0.5, 0.5))
])
}
# method 1 for construct training dataset and validate dataset
# draw whole dataset class distribution
if os.path.exists(path + '/.DS_Store'):
os.remove(path + '/.DS_Store')
dataset = datasets.ImageFolder(path, transform=image_transforms['train'])
idx2class = {v: k for k, v in dataset.class_to_idx.items()}
# plt.figure(figsize=(18, 8))
# plot_from_dict(get_class_distribution(dataset, idx2class), plot_title='Entire Dataset', legend_switch=1)
# plt.savefig('Entire Dataset Distribution.eps', dpi=600, format='eps')
print('classes: ', dataset.classes) # all classes in dataset
print('number of classes: ', len(dataset.classes), dataset.class_to_idx)
print('dataset: ', type(dataset), dataset)
dataset_size = len(dataset)
dataset_indices = list(range(dataset_size))
np.random.shuffle(dataset_indices)
val_split_index = int(np.floor(0.7 * dataset_size)) # train 70%, val 20%, test 10%
test_split_index = int(np.floor(0.9 * dataset_size))
train_idx, val_idx, test_idx = dataset_indices[:val_split_index], dataset_indices[val_split_index:test_split_index], dataset_indices[test_split_index:]
print('len: ', len(train_idx), len(val_idx), len(test_idx))
train_sampler = SubsetRandomSampler(train_idx)
val_sampler = SubsetRandomSampler(val_idx)
test_sampler = SubsetRandomSampler(test_idx)
# batch_size: number of iteration in each time
# when use SubsetRandomSampler cannot use shuffle, shuffle: whether random sort in each time
train_loader = DataLoader(dataset=dataset, batch_size=20, shuffle=False, sampler=train_sampler, num_workers=8, pin_memory=True)
val_loader = DataLoader(dataset=dataset, batch_size=20, shuffle=False, sampler=val_sampler, num_workers=8, pin_memory=True)
test_loader = DataLoader(dataset=dataset, batch_size=20, shuffle=False, sampler=test_sampler, num_workers=8, pin_memory=True)
'''
use new test dataset to test model accuracy, need to delete finally
'''
# test_dataset = 'dataset_test'
# test_dataset = datasets.ImageFolder(test_dataset, transform=image_transforms['test'])
# dataset_size = len(test_dataset)
# dataset_indices = list(range(dataset_size))
# np.random.shuffle(dataset_indices)
# test_split_index = int(np.floor(0.1 * dataset_size))
# test_idx = dataset_indices[:test_split_index]
# test_sampler = SubsetRandomSampler(test_idx)
# idx2class_test = {v: k for k, v in test_dataset.class_to_idx.items()}
# test_loader = DataLoader(dataset=test_dataset, batch_size=20, shuffle=False, sampler=test_sampler, num_workers=8, pin_memory=True)
print('len of training set: ', len(train_loader), train_loader)
print('len of validation set: ', len(val_loader), val_loader)
print('len of test set: ', len(test_loader), test_loader)
# draw train, val, test dataset class distribution
# fig, axes = plt.subplots(nrows=1, ncols=2, figsize=(24, 8))
# plot_from_dict(get_class_distribution_loaders(train_loader, dataset, idx2class), plot_title='Train Set', legend_switch=0, ax=axes[0])
# plot_from_dict(get_class_distribution_loaders(val_loader, dataset, idx2class), plot_title='Val Set', legend_switch=1, ax=axes[1])
# plt.savefig('Train and Validate Distribution.eps', dpi=600, format='eps')
# plt.figure(figsize=(18, 8))
# plot_from_dict(get_class_distribution_loaders(test_loader, dataset, idx2class), plot_title='Test Set', legend_switch=1)
# plt.savefig('Test Distribution.eps', dpi=600, format='eps')
# plt.show()
# method 2 for construct training dataset and validate dataset
# draw whole dataset class distribution
# if os.path.exists(path + '/.DS_Store'):
# os.remove(path + '/.DS_Store')
# dataset = datasets.ImageFolder(path)
# idx2class = {v: k for k, v in dataset.class_to_idx.items()}
# plt.figure(figsize=(18, 8))
# plot_from_dict(get_class_distribution(dataset, idx2class), plot_title='Entire Dataset', legend_switch=1)
# plt.savefig('Entire Dataset Distribution.eps', dpi=600, format='eps')
# stu_class = os.listdir(path)
# train_dataset = path + '/train'
# val_dataset = path + '/validate'
# test_dataset = path + '/test'
# if os.path.exists(train_dataset):
# shutil.rmtree(train_dataset)
# if os.path.exists(val_dataset):
# shutil.rmtree(val_dataset)
# if os.path.exists(test_dataset):
# shutil.rmtree(test_dataset)
# os.makedirs(train_dataset)
# os.makedirs(val_dataset)
# os.makedirs(test_dataset)
# for i in range(len(stu_class)):
# file_path_one_stu = path + '/' + stu_class[i]
# file_list_one_stu = os.listdir(file_path_one_stu)
#
# file_list_one_stu = sorted(file_list_one_stu)
# np.random.shuffle(file_list_one_stu)
# # print(file_list_one_stu)
# val_split_index = int(np.floor(0.7 * len(file_list_one_stu))) # train 70%, val 20%, test 10%
# test_split_index = int(np.floor(0.9 * len(file_list_one_stu)))
# train_idx, val_idx, test_idx = file_list_one_stu[:val_split_index], file_list_one_stu[val_split_index:test_split_index], file_list_one_stu[test_split_index:]
# os.makedirs(train_dataset + '/' + stu_class[i])
# os.makedirs(val_dataset + '/' + stu_class[i])
# os.makedirs(test_dataset + '/' + stu_class[i])
# for file in os.listdir(file_path_one_stu):
# if file in train_idx:
# shutil.move(file_path_one_stu + '/' + file, train_dataset + '/' + stu_class[i])
# elif file in val_idx:
# shutil.move(file_path_one_stu + '/' + file, val_dataset + '/' + stu_class[i])
# else:
# shutil.move(file_path_one_stu + '/' + file, test_dataset + '/' + stu_class[i])
# shutil.rmtree(file_path_one_stu)
#
# train_dataset = datasets.ImageFolder(train_dataset, transform=image_transforms['train'])
# val_dataset = datasets.ImageFolder(val_dataset, transform=image_transforms['train'])
# test_dataset = datasets.ImageFolder(test_dataset, transform=image_transforms['test'])
# train_loader = DataLoader(dataset=train_dataset, batch_size=20, shuffle=True, num_workers=8, pin_memory=True)
# val_loader = DataLoader(dataset=val_dataset, batch_size=20, shuffle=True, num_workers=8, pin_memory=True)
# test_loader = DataLoader(dataset=test_dataset, batch_size=20, shuffle=True, num_workers=8, pin_memory=True)
#
# print('len of training set: ', len(train_loader), train_loader)
# print('len of validation set: ', len(val_loader), val_loader)
# print('len of test set: ', len(test_loader), test_loader)
#
# # draw train, val, test dataset class distribution
# fig, axes = plt.subplots(nrows=1, ncols=2, figsize=(24, 8))
# plot_from_dict(get_class_distribution(train_dataset, idx2class), plot_title='Train Set', legend_switch=0, ax=axes[0])
# plot_from_dict(get_class_distribution(val_dataset, idx2class), plot_title='Val Set', legend_switch=1, ax=axes[1])
# plt.savefig('Train and Validate Distribution.eps', dpi=600, format='eps')
# plt.figure(figsize=(18, 8))
# plot_from_dict(get_class_distribution(test_dataset, idx2class), plot_title='Test Set', legend_switch=1)
# plt.savefig('Test Distribution.eps', dpi=600, format='eps')
# plt.show()
return train_loader, val_loader, test_loader, filename, tuple(dataset.classes), idx2class
def loadtestdata(test_dataset='dataset_test'):
filename = test_dataset.split('/')[-1].split('_')[-1]
print('path:', test_dataset)
print('filename:', filename)
image_transforms = {
'test': transforms.Compose([
transforms.Resize((224, 224)),
transforms.ToTensor(),
transforms.Normalize((0.5, 0.5, 0.5), (0.5, 0.5, 0.5))
])
}
# draw whole dataset class distribution
if os.path.exists(test_dataset + '/.DS_Store'):
os.remove(test_dataset + '/.DS_Store')
dataset = datasets.ImageFolder(test_dataset, transform=image_transforms['test'])
idx2class = {v: k for k, v in dataset.class_to_idx.items()}
# plt.figure(figsize=(18, 8))
# plot_from_dict(get_class_distribution(dataset, idx2class), plot_title='Entire Dataset', legend_switch=1)
# plt.savefig('Entire Dataset Distribution.eps', dpi=600, format='eps')
print('classes: ', dataset.classes) # all classes in dataset
print('number of classes: ', len(dataset.classes), dataset.class_to_idx)
print('dataset: ', type(dataset), dataset)
'''
use new test dataset to test model accuracy, need to delete finally
'''
test_ratio = 1
test_dataset = datasets.ImageFolder(test_dataset, transform=image_transforms['test'])
dataset_size = len(test_dataset)
dataset_indices = list(range(dataset_size))
np.random.shuffle(dataset_indices)
test_split_index = int(np.floor(test_ratio * dataset_size))
test_idx = dataset_indices[:test_split_index]
# test_sampler = SubsetRandomSampler(test_idx)
# batch_size: number of iteration in each time
# when use SubsetRandomSampler cannot use shuffle, shuffle: whether random sort in each time
test_loader = DataLoader(dataset=test_dataset, batch_size=20, shuffle=False, num_workers=8, pin_memory=True)
print('len of test set: ', len(test_loader), test_loader)
return test_loader, filename, tuple(dataset.classes), idx2class
class Net(nn.Module): # define net, which extends torch.nn.Module
def __init__(self, class_num):
super(Net, self).__init__()
self.conv1 = nn.Conv2d(3, 6, 5) # convolution layer
self.pool = nn.MaxPool2d(2, 2) # pooling layer
self.conv2 = nn.Conv2d(6, 16, 5) # convolution layer
self.fc1 = nn.Linear(16 * 5 * 5, 120) # fully connected layer
self.fc2 = nn.Linear(120, 84)
self.fc3 = nn.Linear(84, class_num) # output is class_num, class_num is the number of class in dataset
def forward(self, x): # feed forward
x = self.pool(F.relu(self.conv1(x))) # F is torch.nn.functional
x = self.pool(F.relu(self.conv2(x)))
x = x.view(x.shape[0],
-1) # .view( ) is a method tensor, which automatically change tensor size but elements number not change
x = F.relu(self.fc1(x))
x = F.relu(self.fc2(x))
x = self.fc3(x)
return x
def trainandsave(path, epoches):
train_loader, validate_loader, test_loader, filename, classes, idx2class = loadtraindata(path)
# myNet
# net = Net(len(classes))
# alexNet
# net = models.alexnet(pretrained=True, )
# net.classifier[6] = nn.Linear(4096, len(classes))
# googleNet:
# net = models.googlenet(pretrained=True)
# net.fc = nn.Linear(1024, len(classes))
# resNet18
# net = models.resnet18(pretrained=True, )
# net.fc = nn.Linear(512 * models.resnet.BasicBlock.expansion, len(classes))
# resNet50
net = models.resnet50(pretrained=True, )
net.fc = nn.Linear(512 * models.resnet.Bottleneck.expansion, len(classes))
# resNet101
# net = models.resnet101(pretrained=True, )
# net.fc = nn.Linear(512 * models.resnet.Bottleneck.expansion, len(classes))
# resnet152
# net = models.resnet152(pretrained=True, )
# net.fc = nn.Linear(512 * models.resnet.Bottleneck.expansion, len(classes))
# densenet121
# net = models.densenet121(pretrained=True, )
# net.classifier = nn.Linear(1024, len(classes))
# densenet161
# net = models.densenet161(pretrained=True, )
# net.classifier = nn.Linear(2208, len(classes))
# vgg11 CUDA out of memory
# net = models.vgg11(pretrained=True, )
# net.classifier[6] = nn.Linear(4096, len(classes))
# vgg11_bn CUDA out of memory
# net = models.vgg11_bn(pretrained=True, )
# net.classifier[6] = nn.Linear(4096, len(classes))
# mobilenet_v3
# net = models.mobilenet_v3_small(pretrained=False, num_classes=len(classes), )
# net = models.mobilenet_v3_small(pretrained=True, )
# net.classifier[3] = nn.Linear(1024, len(classes))
# squeezenet1_1
# net = models.squeezenet1_1(pretrained=True, )
# net.classifier[1] = nn.Conv2d(512, len(classes), kernel_size=(1,1), stride=(1,1))
# inception_v3
# net = models.inception_v3(pretrained=True, aux_logits=True)
# net.fc = nn.Linear(2048, len(classes))
# net.AuxLogits = models.inception.InceptionAux(768, len(classes))
# print(net)
net.to(DEVICE)
optimizer = optim.SGD(net.parameters(), lr=0.001, momentum=0.9) # learning rate=0.001
criterion = nn.CrossEntropyLoss().to(DEVICE) # loss function
scaler = GradScaler() # automatic mixed precision
# training part
for epoch in range(epoches): # 10 epoch
# each epoch train all images, so total train 10 times
# writer = SummaryWriter('runs/iExam_20220127_0518_1')
# train_loss, train_accuracy,scaler = train(train_loader, net, criterion, optimizer, epoch, scaler, writer)
train_loss, train_accuracy, scaler = train(train_loader, net, criterion, optimizer, epoch, scaler)
val_loss, val_accuracy = validate(validate_loader, net, criterion, epoch)
# test_accuracy = test(test_loader, net, idx2class)
# writer.add_scalar('loss/train', np.asarray(np.mean(train_loss)), epoch)
# writer.add_scalar('acc/train', np.asarray(np.mean(train_accuracy)), epoch)
# writer.add_scalar('loss/val', np.asarray(np.mean(val_loss)), epoch)
# writer.add_scalar('acc/val', np.asarray(np.mean(val_accuracy)), epoch)
textfile = open('tmp.txt', 'a')
textfile.write('epoch_{0}_train_loss = ['.format(epoch))
string = ', '.join(str(item) for item in train_loss)
textfile.write(string + ']\n')
textfile.write('epoch_{0}_train_accuracy = ['.format(epoch))
string = ', '.join(str(item) for item in train_accuracy)
textfile.write(string + ']\n')
textfile.write('epoch_{0}_val_loss = ['.format(epoch))
string = ', '.join(str(item) for item in val_loss)
textfile.write(string + ']\n')
textfile.write('epoch_{0}_val_accuracy = ['.format(epoch))
string = ', '.join(str(item) for item in val_accuracy)
textfile.write(string + ']\n')
textfile.close()
print('Finished Training')
test_accuracy = test(test_loader, net, idx2class)
# print('test accuracy:', test_accuracy)
print('Finished Test')
# textfile = open('tmp.txt', 'a')
# textfile.write('Test_accuracy = [')
# string = ', '.join(str(item) for item in test_accuracy)
# textfile.write(string + ']\n')
# textfile.close()
# save net
# torch.save(net, 'net_'+filename+'.pkl') # save structure and parameter
file_name = 'net_params_resnet50_Pretrain_10epoch_224x224_' + filename + '.pth'
torch.save(net.state_dict(), file_name) # only save parameter
return file_name, classes, net
def another_dataset_test(net_path, test_dataset='dataset_test'):
test_loader, filename, classes, idx2class = loadtestdata(test_dataset)
# googleNet:
# net = models.googlenet(pretrained=True)
# net.fc = nn.Linear(1024, len(classes))
# resNet18
# net = models.resnet18(pretrained=True, )
# net.fc = nn.Linear(512 * models.resnet.BasicBlock.expansion, len(classes))
# resNet50
net = models.resnet50(pretrained=True, )
net.fc = nn.Linear(512 * models.resnet.Bottleneck.expansion, len(classes))
# print(net)
net.load_state_dict(torch.load(net_path))
net.to(DEVICE)
test_accuracy = test(test_loader, net, idx2class)
# print('test accuracy:', test_accuracy)
print('Finished Test')
textfile = open('tmp.txt', 'a')
textfile.write('Test_accuracy = [')
string = ', '.join(str(item) for item in test_accuracy)
textfile.write(string + ']\n')
textfile.close()
def image_test(net_path, classes):
# googleNet:
# net = models.googlenet(pretrained=True)
# net.fc = nn.Linear(1024, len(classes))
# resNet18
# net = models.resnet18(pretrained=True, )
# net.fc = nn.Linear(512 * models.resnet.BasicBlock.expansion, len(classes))
# resNet50
net = models.resnet50(pretrained=True, )
net.fc = nn.Linear(512 * models.resnet.Bottleneck.expansion, len(classes))
# alexNet
# net = models.alexnet(pretrained=True, )
# net.classifier[6] = nn.Linear(4096, len(classes))
net.load_state_dict(torch.load(net_path))
net.to(DEVICE)
net.eval()
data_transform = transforms.Compose([
transforms.Resize((224, 224)), # reszie image to 224*224
transforms.ToTensor(), # each pixel to tensor
transforms.Normalize((0.5, 0.5, 0.5), (0.5, 0.5, 0.5))
])
img_pred_lst = []
img_pred_score = []
metric_monitor = MetricMonitor()
print('classes:',classes)
stream = tqdm(image_sampler())
for name in stream:
image = cv2.imread(name)
image = Image.fromarray(cv2.cvtColor(image, cv2.COLOR_BGR2RGB))
# image.show()
image = data_transform(image) # change PIL image to tensor
# print('before:', image.shape, image)
image = image.view(-1, 3, 224, 224) # change 3-dimensional to 4-dimensional for input
# print('after:',image.shape, image)
output = net(image.to(DEVICE, non_blocking=True))
y_pred_softmax = torch.log_softmax(output, dim=1)
_, y_pred_tag = torch.max(y_pred_softmax, dim=1)
tmp = y_pred_tag.cpu().detach().numpy()
if classes[tmp[0]] != name.split('\\')[1].split('_')[0]:
img_pred_score.append(0)
metric_monitor.update('Accuracy', 0)
else:
img_pred_score.append(1)
metric_monitor.update('Accuracy', 1)
img_pred_lst.append(classes[tmp[0]])
stream.set_description(
'Test. {metric_monitor}'.format(metric_monitor=metric_monitor)
)
# print(y_pred_tag.cpu().detach().numpy())
# print(img_pred_lst)
img_compare = zip(img_pred_lst, stream)
# print('img_compare', tuple(img_compare))
print('sum: ', sum(img_pred_score), 'len is: ', len(img_pred_score))
def image_sampler(image_path='dataset_fusion'):
img_path_lst = []
return_lst = []
for root, dirs, files in os.walk(image_path):
for name in files:
img_path_lst.append(os.path.join(root, name))
for num in range(len(img_path_lst)//5):
while True:
tmp = random.randint(0, len(img_path_lst))
if img_path_lst[tmp] in return_lst:
continue
else:
return_lst.append(img_path_lst[tmp])
break
# print(return_lst)
return return_lst
if __name__ == '__main__':
path = 'marked_image_5min'
before = time.asctime(time.localtime(time.time()))
print(before)
# trainandsave(path, epoches=10)
after = time.asctime(time.localtime(time.time()))
print(after)